| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633211
Identifier: 110633211
GI number: 110633211
Start: 946609
End: 947016
Strand: Reverse
Name: 110633211
Synonym: Meso_0854
Alternate gene names: NA
Gene position: 947016-946609 (Counterclockwise)
Preceding gene: 110633212
Following gene: 110633210
Centisome position: 21.46
GC content: 61.27
Gene sequence:
>408_bases ATGAAGATCGACGGGCAATGCCATTGCGGCCATGTGAGTTATGAAGCGGAGATCGATCCGGAAAAGGTCTCCGTCTGTCA CTGCACGGATTGCCAGAAGCTCACCGGTTCGCCCTACCGCGTATCGGTCGCAGCCAGGCCGGAGAACATCCGCATGACCG GCAATCCACCCAAGGTCTATCTGAAGGTAGCAGAGAGCGGCCGGACACGCCGCCAGTATTTTTGCCCGGAATGCGGCTCG CCGGTATTCGTTTGCGGCGAAGATCCCGAAACCACCCCTTGGGGCATTCGCTGGGGAAGCATCAATCAGCGCGGGGAACT CGTGCCAAAGCGGCAGATCTGGTGCCGCTCCGCGCAGCCTTGGGCGGCCAGAGCCTTCGAGGACCTGCCGAGCGCCGAAA GGGATTGA
Upstream 100 bases:
>100_bases CTCGGCTGTCGTGCCCCTCATCTATTTCTGGAAAAAGGGATGGTTCTAAGCCGCGGTCGTGGATACCGTTGATCAATGGT TCCAACCGGGAGGGCAGGAC
Downstream 100 bases:
>100_bases GCGGTCGCTTTTTCCAGCTCTTGTCTTCGCTCGTTCCGATGTTATATCATGCGTTATAACATAGGACGAGAGCCATGAAC GTCACCATCCGCAAGATCGG
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKIDGQCHCGHVSYEAEIDPEKVSVCHCTDCQKLTGSPYRVSVAARPENIRMTGNPPKVYLKVAESGRTRRQYFCPECGS PVFVCGEDPETTPWGIRWGSINQRGELVPKRQIWCRSAQPWAARAFEDLPSAERD
Sequences:
>Translated_135_residues MKIDGQCHCGHVSYEAEIDPEKVSVCHCTDCQKLTGSPYRVSVAARPENIRMTGNPPKVYLKVAESGRTRRQYFCPECGS PVFVCGEDPETTPWGIRWGSINQRGELVPKRQIWCRSAQPWAARAFEDLPSAERD >Mature_135_residues MKIDGQCHCGHVSYEAEIDPEKVSVCHCTDCQKLTGSPYRVSVAARPENIRMTGNPPKVYLKVAESGRTRRQYFCPECGS PVFVCGEDPETTPWGIRWGSINQRGELVPKRQIWCRSAQPWAARAFEDLPSAERD
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15213; Mature: 15213
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDGQCHCGHVSYEAEIDPEKVSVCHCTDCQKLTGSPYRVSVAARPENIRMTGNPPKVY CCCCCCEECCEEEEECCCCCCCEEEEECCCCHHHCCCCEEEEEEECCCEEEECCCCCEEE LKVAESGRTRRQYFCPECGSPVFVCGEDPETTPWGIRWGSINQRGELVPKRQIWCRSAQP EEECCCCCCCCEEECCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCEEECCCCC WAARAFEDLPSAERD HHHHHHHHCCCCCCC >Mature Secondary Structure MKIDGQCHCGHVSYEAEIDPEKVSVCHCTDCQKLTGSPYRVSVAARPENIRMTGNPPKVY CCCCCCEECCEEEEECCCCCCCEEEEECCCCHHHCCCCEEEEEEECCCEEEECCCCCEEE LKVAESGRTRRQYFCPECGSPVFVCGEDPETTPWGIRWGSINQRGELVPKRQIWCRSAQP EEECCCCCCCCEEECCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCEEECCCCC WAARAFEDLPSAERD HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA