| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633206
Identifier: 110633206
GI number: 110633206
Start: 942865
End: 943497
Strand: Direct
Name: 110633206
Synonym: Meso_0849
Alternate gene names: NA
Gene position: 942865-943497 (Clockwise)
Preceding gene: 110633205
Following gene: 110633207
Centisome position: 21.37
GC content: 50.08
Gene sequence:
>633_bases TTGGGCTGGAGAGTTATTGGAAGAGCGGGGGTATACGTGAGCAAGCATCTAAGTCAGTATGATCAATATAGTATCTACGA CAGTCAGCAGCAGGACCCGAACTTTTCATTTCTTAAATCGAGTCTGATTCAAACAAACCGGCGCCGTATTCGGGATAGCG TCAGCTATTTCTCCGTGCGAAGCTGGAGAAAGCAACTCAAACCACTTCAGATTGCGTCGGTTCGAAATCTAAAAGCCAAT CCGTCGGAAGCAGCATTGAGGTCTATTGCGGAGGAGATTGCGGAGTGCGCGTGCGCCATTACGAATGGACGCCCCTATAA CTTCGTTTGTCCTGTTCCTTCAGGTACGCCGCGCAAGAAGAAGAATTTCTCTCATCTCATAGCGCGTTCTGTGGCGAACT ACATGAACATCAACTTTTGTCCCGTTTTGGAAACGGTTTCAGAGGGAGGCGCAGGTTCCAGCCATCCGCAAAAGAGCCTT CGTTTCAAAGCGCGATTGGAAGGCGAAAGGCCTGCCGGGAAAATTGGCCTTATTGTTGATGACGTGGCCACTACTGGATC GCATTTTGTCCAGTGCGTCGAGCAGTTCAGGAGATTCGACGTCCCGGTTGTATGCGTGTCGTGGATTGGATGA
Upstream 100 bases:
>100_bases GAGCCGTCCCTTTTCGGGACAAAAAAAAACGGGGTAGTGTTACACGGGCTTGGGGCCCTTAACCTTAACGCAAAACGCGC AGCCAATGTCTGCCTAGGCA
Downstream 100 bases:
>100_bases ATGCGCGCCGCTGGCCGGAAGGCCAGCGGTTTCCTCTTTGAAGCCGCCGATCCCTGGGAACGGCGAAATAGCACAGCGGC GCGGTTCGCGCGCCTAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGWRVIGRAGVYVSKHLSQYDQYSIYDSQQQDPNFSFLKSSLIQTNRRRIRDSVSYFSVRSWRKQLKPLQIASVRNLKAN PSEAALRSIAEEIAECACAITNGRPYNFVCPVPSGTPRKKKNFSHLIARSVANYMNINFCPVLETVSEGGAGSSHPQKSL RFKARLEGERPAGKIGLIVDDVATTGSHFVQCVEQFRRFDVPVVCVSWIG
Sequences:
>Translated_210_residues MGWRVIGRAGVYVSKHLSQYDQYSIYDSQQQDPNFSFLKSSLIQTNRRRIRDSVSYFSVRSWRKQLKPLQIASVRNLKAN PSEAALRSIAEEIAECACAITNGRPYNFVCPVPSGTPRKKKNFSHLIARSVANYMNINFCPVLETVSEGGAGSSHPQKSL RFKARLEGERPAGKIGLIVDDVATTGSHFVQCVEQFRRFDVPVVCVSWIG >Mature_209_residues GWRVIGRAGVYVSKHLSQYDQYSIYDSQQQDPNFSFLKSSLIQTNRRRIRDSVSYFSVRSWRKQLKPLQIASVRNLKANP SEAALRSIAEEIAECACAITNGRPYNFVCPVPSGTPRKKKNFSHLIARSVANYMNINFCPVLETVSEGGAGSSHPQKSLR FKARLEGERPAGKIGLIVDDVATTGSHFVQCVEQFRRFDVPVVCVSWIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23558; Mature: 23427
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWRVIGRAGVYVSKHLSQYDQYSIYDSQQQDPNFSFLKSSLIQTNRRRIRDSVSYFSVR CCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SWRKQLKPLQIASVRNLKANPSEAALRSIAEEIAECACAITNGRPYNFVCPVPSGTPRKK HHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHH KNFSHLIARSVANYMNINFCPVLETVSEGGAGSSHPQKSLRFKARLEGERPAGKIGLIVD HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHEEHEEECCCCCCCEEEEEEH DVATTGSHFVQCVEQFRRFDVPVVCVSWIG HHHHHHHHHHHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure GWRVIGRAGVYVSKHLSQYDQYSIYDSQQQDPNFSFLKSSLIQTNRRRIRDSVSYFSVR CCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SWRKQLKPLQIASVRNLKANPSEAALRSIAEEIAECACAITNGRPYNFVCPVPSGTPRKK HHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHH KNFSHLIARSVANYMNINFCPVLETVSEGGAGSSHPQKSLRFKARLEGERPAGKIGLIVD HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHEEHEEECCCCCCCEEEEEEH DVATTGSHFVQCVEQFRRFDVPVVCVSWIG HHHHHHHHHHHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA