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The map label for this gene is 110633204

Identifier: 110633204

GI number: 110633204

Start: 941320

End: 941877

Strand: Reverse

Name: 110633204

Synonym: Meso_0847

Alternate gene names: NA

Gene position: 941877-941320 (Counterclockwise)

Preceding gene: 110633209

Following gene: 110633194

Centisome position: 21.35

GC content: 62.19

Gene sequence:

>558_bases
ATGCGCAAGCGCTCACTTCTTTCCCTGGCCGTCGCCCTCGCCGTCACACCGGGAATGGCCTTGGCACAAACAGGCGGTCC
GCAGTCCCCTGGGCCGGATCAAACGCCGCGCTCGGGTTCACCCGAAGATCAGGATTTCGGGGGCGATCGCGACTCCATGC
GGAACATGATGCGCGAGATGATGGAAGAGATGATGCGCGGCGCGCCGTCAGCGCAAGAGGAGCGCGATATGCCGCCCGAT
GGAACCATGAGGCGCGCTCAGCCTCCCCAAAATATGCACCAGCAGAGAGAGAGCGGGCCGCGGCGGTTTGGTCGGGAGCG
CCACATGGGGATGGGCATGGGGATGGGCATGGGCTCCAGGGGGTTCCACAGCGCACGGATGAGAATGATGTTCGCGATAG
TCGACGCCGATGGAGACGGCGCCCTGAGCATCGAGGAGGTCAACGACTTCCACAGCCGCATCTTCAATGCGGTGGACCAG
GATGGCGATGGAAGCGTGACGATGGAGGAAATCGAAGATTTCTTCCACGCCGGTTTCGAGGATGGCGAAAGAGATTAG

Upstream 100 bases:

>100_bases
CGGCGAACGAATCGGCGGGCGAACGATAGGTTTCAGGAACAAGCTGAAGGCGGCCGTGGTTCTGTTTGCTTCTTGAACAT
CGCGTCGTAGGAGCCCCACC

Downstream 100 bases:

>100_bases
CCCGCGAAAGCCGCCTCGTAGGCCGCCACCACGGCTCGCGCTTTCTTCGCCACATCTTCCGGCAGCGAGCCGGGCTTATA
AAGGCTGGAACCCAGGCCAA

Product: calcium-binding EF-hand

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRKRSLLSLAVALAVTPGMALAQTGGPQSPGPDQTPRSGSPEDQDFGGDRDSMRNMMREMMEEMMRGAPSAQEERDMPPD
GTMRRAQPPQNMHQQRESGPRRFGRERHMGMGMGMGMGSRGFHSARMRMMFAIVDADGDGALSIEEVNDFHSRIFNAVDQ
DGDGSVTMEEIEDFFHAGFEDGERD

Sequences:

>Translated_185_residues
MRKRSLLSLAVALAVTPGMALAQTGGPQSPGPDQTPRSGSPEDQDFGGDRDSMRNMMREMMEEMMRGAPSAQEERDMPPD
GTMRRAQPPQNMHQQRESGPRRFGRERHMGMGMGMGMGSRGFHSARMRMMFAIVDADGDGALSIEEVNDFHSRIFNAVDQ
DGDGSVTMEEIEDFFHAGFEDGERD
>Mature_185_residues
MRKRSLLSLAVALAVTPGMALAQTGGPQSPGPDQTPRSGSPEDQDFGGDRDSMRNMMREMMEEMMRGAPSAQEERDMPPD
GTMRRAQPPQNMHQQRESGPRRFGRERHMGMGMGMGMGSRGFHSARMRMMFAIVDADGDGALSIEEVNDFHSRIFNAVDQ
DGDGSVTMEEIEDFFHAGFEDGERD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20503; Mature: 20503

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
11.4 %Met     (Translated Protein)
11.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
11.4 %Met     (Mature Protein)
11.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRSLLSLAVALAVTPGMALAQTGGPQSPGPDQTPRSGSPEDQDFGGDRDSMRNMMREM
CCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
MEEMMRGAPSAQEERDMPPDGTMRRAQPPQNMHQQRESGPRRFGRERHMGMGMGMGMGSR
HHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GFHSARMRMMFAIVDADGDGALSIEEVNDFHSRIFNAVDQDGDGSVTMEEIEDFFHAGFE
CHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCC
DGERD
CCCCC
>Mature Secondary Structure
MRKRSLLSLAVALAVTPGMALAQTGGPQSPGPDQTPRSGSPEDQDFGGDRDSMRNMMREM
CCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
MEEMMRGAPSAQEERDMPPDGTMRRAQPPQNMHQQRESGPRRFGRERHMGMGMGMGMGSR
HHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GFHSARMRMMFAIVDADGDGALSIEEVNDFHSRIFNAVDQDGDGSVTMEEIEDFFHAGFE
CHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCC
DGERD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA