BacMap

Definition	Mesorhizobium sp. BNC1, complete genome.
Accession	NC_008254
Length	4,412,446

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The map label for this gene is fabG [H]

Identifier: 110633179

GI number: 110633179

Start: 909702

End: 910490

Strand: Direct

Name: fabG [H]

Synonym: Meso_0822

Alternate gene names: 110633179

Gene position: 909702-910490 (Clockwise)

Preceding gene: 110633178

Following gene: 110633180

Centisome position: 20.62

GC content: 65.91

Gene sequence:

>789_bases
ATGAAACCGCCTTATGAGGGACGGGTCGCGGTTGTCACCGGAGGCTCGTCCGGCATCGGTCTCGCGACGGTTCAATTGCT
GCTTGAGCAGGGGGCGAAGGTCGCCCTTTGCGCGCGCGGGGAAGCGCGGCTCAAGGACGTGGTTTCGGCCCTGGGGCGTG
ACCACGGCCCGGATCGCTTGCTCTCTCGCGCCTTTTCGGTGCTTGATTCAGATGCCGTCCACGCCTTCGCCGCCGAAGTC
GAGGCTGCCTTCGGCCGCTGCGACCTGCTGGTCAACAATGCCGGCCAGGGCCGCATCTCGACCTTCGAGAACACAAGTGA
CGACGACTGGCGCGCCGAATACGAGCTCAAGCTCTTCAGCCAGATTTACCCCATCCGCGCTTTCCTGCCGATGCTCAAGC
GGGCAAAGGGCGCCGTTGTCGCGGTCAATTCGCTGCTCGCCTATCAGCCCGAGGCGCACATGGTCTGCACCTCCTCGGCC
CGGGCCGGCGTGCAGAACCTGCTCAAGTCGCTCAGTCTTGAGCTGGCGCCCGACGTTCGGGTCAATTCCCTGCTGCTCGG
CCTTGTCGACTCCGGCCAATGGGCCCGCCGCTTTGCCGAACGCGAGGACCAGTCGATGAGCCGGGAGGAATGGTACGGCA
ATCTGGCCCGCGGCAAGGGCATTCCGCTCGGGCGTCTGGGTGATCCGAGCGAAGCCGCCGCCGCCATCGCGTTCTTGGGC
TCTCACGCCGCCAGCTACATCACGGGCGCGCAACTCGATGTATCGGGCGGCCTCGCCCGGCACATCTGA

Upstream 100 bases:

>100_bases
TGGACCAGTGGATGACGGCTGGGCCGCCGACCAGCGCGCAGCGCGCCGTCATGCAGGGCCGTCCCGATCCCGGCTTCCCC
GAGCTGAGAGGAAGCAACCG

Downstream 100 bases:

>100_bases
CATCCAGTTCATTGGAAGCCGATATGAAACTCGAATCCATCACACGCCACGAGACCGTCGGCGATTTCATTGCAGCCTAT
CTTGCCGATATCGGCGTCGA

Product: short chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKPPYEGRVAVVTGGSSGIGLATVQLLLEQGAKVALCARGEARLKDVVSALGRDHGPDRLLSRAFSVLDSDAVHAFAAEV
EAAFGRCDLLVNNAGQGRISTFENTSDDDWRAEYELKLFSQIYPIRAFLPMLKRAKGAVVAVNSLLAYQPEAHMVCTSSA
RAGVQNLLKSLSLELAPDVRVNSLLLGLVDSGQWARRFAEREDQSMSREEWYGNLARGKGIPLGRLGDPSEAAAAIAFLG
SHAASYITGAQLDVSGGLARHI

Sequences:

>Translated_262_residues
MKPPYEGRVAVVTGGSSGIGLATVQLLLEQGAKVALCARGEARLKDVVSALGRDHGPDRLLSRAFSVLDSDAVHAFAAEV
EAAFGRCDLLVNNAGQGRISTFENTSDDDWRAEYELKLFSQIYPIRAFLPMLKRAKGAVVAVNSLLAYQPEAHMVCTSSA
RAGVQNLLKSLSLELAPDVRVNSLLLGLVDSGQWARRFAEREDQSMSREEWYGNLARGKGIPLGRLGDPSEAAAAIAFLG
SHAASYITGAQLDVSGGLARHI
>Mature_262_residues
MKPPYEGRVAVVTGGSSGIGLATVQLLLEQGAKVALCARGEARLKDVVSALGRDHGPDRLLSRAFSVLDSDAVHAFAAEV
EAAFGRCDLLVNNAGQGRISTFENTSDDDWRAEYELKLFSQIYPIRAFLPMLKRAKGAVVAVNSLLAYQPEAHMVCTSSA
RAGVQNLLKSLSLELAPDVRVNSLLLGLVDSGQWARRFAEREDQSMSREEWYGNLARGKGIPLGRLGDPSEAAAAIAFLG
SHAASYITGAQLDVSGGLARHI

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI19923817, Length=264, Percent_Identity=32.5757575757576, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI32483357, Length=260, Percent_Identity=27.3076923076923, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI40254992, Length=253, Percent_Identity=29.6442687747036, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=29.1338582677165, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI59889578, Length=236, Percent_Identity=31.3559322033898, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI10190704, Length=265, Percent_Identity=27.5471698113208, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI126723750, Length=260, Percent_Identity=25.7692307692308, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI20149619, Length=142, Percent_Identity=33.8028169014084, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI66933014, Length=255, Percent_Identity=27.4509803921569, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=30.6878306878307, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI4503301, Length=262, Percent_Identity=28.2442748091603, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1787335, Length=256, Percent_Identity=31.640625, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=31.9066147859922, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1789208, Length=262, Percent_Identity=28.6259541984733, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787905, Length=258, Percent_Identity=27.1317829457364, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1789057, Length=261, Percent_Identity=26.8199233716475, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789378, Length=258, Percent_Identity=25.1937984496124, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788459, Length=268, Percent_Identity=29.4776119402985, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790717, Length=254, Percent_Identity=24.4094488188976, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787820, Length=194, Percent_Identity=27.319587628866, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=269, Percent_Identity=31.2267657992565, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=32.0754716981132, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=30.1526717557252, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71994600, Length=259, Percent_Identity=32.046332046332, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=263, Percent_Identity=26.9961977186312, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=29.8449612403101, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=255, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17559104, Length=279, Percent_Identity=30.4659498207885, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI25147288, Length=259, Percent_Identity=29.7297297297297, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=30.4832713754647, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=272, Percent_Identity=28.6764705882353, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI72000259, Length=268, Percent_Identity=29.1044776119403, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=27.0676691729323, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=274, Percent_Identity=28.4671532846715, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=29.5880149812734, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=271, Percent_Identity=29.8892988929889, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=27.3076923076923, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193204405, Length=272, Percent_Identity=28.3088235294118, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=26.4925373134328, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=276, Percent_Identity=27.1739130434783, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=26.8199233716475, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=271, Percent_Identity=29.520295202952, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=262, Percent_Identity=27.0992366412214, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=26.1363636363636, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=258, Percent_Identity=26.3565891472868, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17536651, Length=263, Percent_Identity=24.3346007604563, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=259, Percent_Identity=28.1853281853282, Blast_Score=97, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6322227, Length=193, Percent_Identity=26.4248704663212, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=35.3174603174603, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21357041, Length=261, Percent_Identity=32.5670498084291, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644339, Length=267, Percent_Identity=32.2097378277154, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI28571526, Length=266, Percent_Identity=30.8270676691729, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24639444, Length=257, Percent_Identity=29.9610894941634, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=28.125, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24644337, Length=257, Percent_Identity=31.1284046692607, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24643142, Length=255, Percent_Identity=27.843137254902, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21355631, Length=172, Percent_Identity=30.2325581395349, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI116007236, Length=195, Percent_Identity=31.7948717948718, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24648693, Length=150, Percent_Identity=34.6666666666667, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355889, Length=150, Percent_Identity=34.6666666666667, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI18859837, Length=175, Percent_Identity=30.8571428571429, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27977; Mature: 27977

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPPYEGRVAVVTGGSSGIGLATVQLLLEQGAKVALCARGEARLKDVVSALGRDHGPDRL
CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHH
LSRAFSVLDSDAVHAFAAEVEAAFGRCDLLVNNAGQGRISTFENTSDDDWRAEYELKLFS
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHH
QIYPIRAFLPMLKRAKGAVVAVNSLLAYQPEAHMVCTSSARAGVQNLLKSLSLELAPDVR
HHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCC
VNSLLLGLVDSGQWARRFAEREDQSMSREEWYGNLARGKGIPLGRLGDPSEAAAAIAFLG
HHHHHEEHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
SHAASYITGAQLDVSGGLARHI
HHHHHHHCCCEEECCCCHHHCC
>Mature Secondary Structure
MKPPYEGRVAVVTGGSSGIGLATVQLLLEQGAKVALCARGEARLKDVVSALGRDHGPDRL
CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHH
LSRAFSVLDSDAVHAFAAEVEAAFGRCDLLVNNAGQGRISTFENTSDDDWRAEYELKLFS
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHH
QIYPIRAFLPMLKRAKGAVVAVNSLLAYQPEAHMVCTSSARAGVQNLLKSLSLELAPDVR
HHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCC
VNSLLLGLVDSGQWARRFAEREDQSMSREEWYGNLARGKGIPLGRLGDPSEAAAAIAFLG
HHHHHEEHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
SHAASYITGAQLDVSGGLARHI
HHHHHHHCCCEEECCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]