| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633157
Identifier: 110633157
GI number: 110633157
Start: 888563
End: 889453
Strand: Direct
Name: 110633157
Synonym: Meso_0800
Alternate gene names: NA
Gene position: 888563-889453 (Clockwise)
Preceding gene: 110633156
Following gene: 110633159
Centisome position: 20.14
GC content: 64.2
Gene sequence:
>891_bases ATGAGGACCGTAGCGATGCGATTGGCTGCGGAGGGCATGCCCCTGCCGCACGCGGATACGCTTCTTGAAACCGTTGGCAC TACGCATTTTCACGAAGCGTTTCTAAAGGCCGCACAGGCTGCTCTTGGCGCGTCCCACGTTGCCGCCTTCGCCGTAGATC CTGCCGGCGCGCCCGAGATTATCATGGTCGCTGAGGAAGAAGAGCCGACACTCGGCGCCTACGCAGCTTCGCGGCGGTAC GTGGAACGCTACTGGCGGCACGACGCTTTGAGCGAGCTCAGCCTCGCCGATGCCGAGCTGTCGCGGGGAGTGCTCGTGCA TACGGGCACAAGCATGTTCGCGCGACTAGCCCACCGGCGTGCCTGCTACTGCGAAACAGGCTGGTCGCGGAGCGGCGGGC GGCTTGTCGATCGCCTGTCGCTGCTGAAGCGCACCGGCCATGGCCTCGTGCGGATCGACTTTTACAGAACACGGGATCGC GGGGGGTTTACGCCGGCCGACATTGGGACGCTGCGCGAGCAAGGATGGTTCTTTGCTTCGCTTGTGGCCCGGCACCGCCT TGCCGCTGTTCCTGCCAGATGGACGGAAGCGCGACCGGCAATCCAGAATCTCATTGAGCGGATCGCGCCGGATATGCCCC GGCGCGAGGTGCAGGTTTGTGCCGGTATCATCTTCGGTCTGAGCTCGGAGGCAATCGCTCTTGAGATCGGCATCGGTCGC AACACTGTGATGACATACCGCAAGCGGGCCTATGCGCGGCTCAATATATCCAGCCAGCATGAATTGCTGCGTGCCGTCTA TTCCGCCGCTGCCACGGTTGGCCCTGTGGCGGCAAACCGTCATGAGGCGCCCGCCCGTTGGGCCCTGCCGCTCGCCAGGG CGGCGGGGTAA
Upstream 100 bases:
>100_bases GAGTGCACCTATGCCGATCGGTATTTCAACGAGGAAGCGCGAGCACGCGCCTGATCCGCAATACCCGTGGTGAGGATGGT GCGGCGGATGGAGGCCCTGG
Downstream 100 bases:
>100_bases CGCAGAGTCACGCCGACTTGCGGCCGGCCAGCGAGCGGTTATCGTATTCCGGCCGAACGATGACATCGAGCACATAGCTT CCGCCTGCTTGAACGGCGGC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Response Regulator Receiver Protein
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MRTVAMRLAAEGMPLPHADTLLETVGTTHFHEAFLKAAQAALGASHVAAFAVDPAGAPEIIMVAEEEEPTLGAYAASRRY VERYWRHDALSELSLADAELSRGVLVHTGTSMFARLAHRRACYCETGWSRSGGRLVDRLSLLKRTGHGLVRIDFYRTRDR GGFTPADIGTLREQGWFFASLVARHRLAAVPARWTEARPAIQNLIERIAPDMPRREVQVCAGIIFGLSSEAIALEIGIGR NTVMTYRKRAYARLNISSQHELLRAVYSAAATVGPVAANRHEAPARWALPLARAAG
Sequences:
>Translated_296_residues MRTVAMRLAAEGMPLPHADTLLETVGTTHFHEAFLKAAQAALGASHVAAFAVDPAGAPEIIMVAEEEEPTLGAYAASRRY VERYWRHDALSELSLADAELSRGVLVHTGTSMFARLAHRRACYCETGWSRSGGRLVDRLSLLKRTGHGLVRIDFYRTRDR GGFTPADIGTLREQGWFFASLVARHRLAAVPARWTEARPAIQNLIERIAPDMPRREVQVCAGIIFGLSSEAIALEIGIGR NTVMTYRKRAYARLNISSQHELLRAVYSAAATVGPVAANRHEAPARWALPLARAAG >Mature_296_residues MRTVAMRLAAEGMPLPHADTLLETVGTTHFHEAFLKAAQAALGASHVAAFAVDPAGAPEIIMVAEEEEPTLGAYAASRRY VERYWRHDALSELSLADAELSRGVLVHTGTSMFARLAHRRACYCETGWSRSGGRLVDRLSLLKRTGHGLVRIDFYRTRDR GGFTPADIGTLREQGWFFASLVARHRLAAVPARWTEARPAIQNLIERIAPDMPRREVQVCAGIIFGLSSEAIALEIGIGR NTVMTYRKRAYARLNISSQHELLRAVYSAAATVGPVAANRHEAPARWALPLARAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32431; Mature: 32431
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS00622 HTH_LUXR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVAMRLAAEGMPLPHADTLLETVGTTHFHEAFLKAAQAALGASHVAAFAVDPAGAPEI CCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHEEEEECCCCCCCE IMVAEEEEPTLGAYAASRRYVERYWRHDALSELSLADAELSRGVLVHTGTSMFARLAHRR EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH ACYCETGWSRSGGRLVDRLSLLKRTGHGLVRIDFYRTRDRGGFTPADIGTLREQGWFFAS HEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHCCHHHHH LVARHRLAAVPARWTEARPAIQNLIERIAPDMPRREVQVCAGIIFGLSSEAIALEIGIGR HHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC NTVMTYRKRAYARLNISSQHELLRAVYSAAATVGPVAANRHEAPARWALPLARAAG CHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MRTVAMRLAAEGMPLPHADTLLETVGTTHFHEAFLKAAQAALGASHVAAFAVDPAGAPEI CCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHEEEEECCCCCCCE IMVAEEEEPTLGAYAASRRYVERYWRHDALSELSLADAELSRGVLVHTGTSMFARLAHRR EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH ACYCETGWSRSGGRLVDRLSLLKRTGHGLVRIDFYRTRDRGGFTPADIGTLREQGWFFAS HEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHCCHHHHH LVARHRLAAVPARWTEARPAIQNLIERIAPDMPRREVQVCAGIIFGLSSEAIALEIGIGR HHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC NTVMTYRKRAYARLNISSQHELLRAVYSAAATVGPVAANRHEAPARWALPLARAAG CHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA