| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is smeIM [H]
Identifier: 110633120
GI number: 110633120
Start: 837932
End: 839050
Strand: Direct
Name: smeIM [H]
Synonym: Meso_0763
Alternate gene names: 110633120
Gene position: 837932-839050 (Clockwise)
Preceding gene: 110633118
Following gene: 110633123
Centisome position: 18.99
GC content: 63.99
Gene sequence:
>1119_bases ATGTCCGCTGTGCGTCCGCTTGAGGAGCTTTCCCCGCTTCCCGCCAAGGCCGATTGGCTGGACGATATCCTGAAAGGCGA CTGTGTCGCCGCTCTTGAGCGGCTTCCCGAAAAGTCGGTGGACGTGATCTTCGCCGATCCGCCCTACAACCTCCAGCTCG AAGGGGCGCTCCATCGTCCCGACCAGTCCCTGGTCGATGCGGTCGACGACGAGTGGGACCAGTTCGAAAGCTTCGCCGCC TATGACGCTTTCACGCGAGCATGGCTTCTGGCGGCCCGCCGCGTGCTTAAGCCGAACGGAACCGTCTGGGTCATCGGCTC CTACCACAACATCTTCCGGGTTGGCGCGATCATGCAGGATCTGGGCTTCTGGATCCTGAACGACATCGTCTGGCGCAAGA CCAATCCGATGCCGAATTTCCGCGGCCGCCGCTTCCAGAACGCCCATGAGACGATGATCTGGGCCTCGCGCGACCGCAAC GCGAAGGGCTACACCTTCAATTACGAGGCCATGAAAGCCGCCAATGACGACCTGCAGATGCGGTCGGACTGGCTGTTTCC GATCTGCACCGGCAAGGAGCGGCTCAAAGACGCTGACGGTAACAAGGTCCATCCGACGCAGAAGCCGGAAGCGCTGCTTG CGCGCGTGCTCCTGTCTTCAACGAAGCCAGGCGATGTGGTCCTCGACCCATTCTTCGGCTCAGGCACCACCGGGGCGGTT GCCAAGCGCCTTGGCCGCCACTTTGTCGGCATCGAGCGGGACCCGGATTATATCGCAGCGGCCCGAGAGCGCATTGCGGC GGTGGAGCCTTTGGATCAAGCCGCGCTCGCGCCGATGGCGGCAAAACGTGAGGAGCCGCGCATCGCCTTTGCGAGCCTGC TGGACTCTGGCCTCGTGAAGCCCGGTATGCAGCTTTACGACAGCAAAAGGCGCTGGGCGGCGCATGTGCGGGCCGACGGC ACGCTCGCAGTTGGCCCGGAGACGGGCTCGATCCACCGGCTCGGCGCCCGCGTCCAGGGCCTGGACGCCTGCAACGGCTG GACCTTTTGGCATTATGAGGAAAAAGGGGCGCTCAAGCCCATCGACGAATTGCGGCAGGTGGCGCGCCGCGGCCTGTAG
Upstream 100 bases:
>100_bases TCTACTCTCATAAGAGCGAATTGGTTCCCCGTCTTACGGAAATATTTACCCTCCTCGGTAACCATAACGGCCGGTAAAAA GTTGCGTCGAGGTTTTGCGT
Downstream 100 bases:
>100_bases GGCTGGGGGTGTAACCGGCCCCCCCTCTTGCGTTTTCCAAGCACTTGCTCCGGGACGAGCCCGCTCGCAATTGCAGGAAA ACGCTTTCTCCCCCACCAAG
Product: DNA adenine methylase CcrM
Products: NA
Alternate protein names: M.SmeI; Adenine-specific methyltransferase SmeIP; M.CcrMI ortholog; Modification methylase SmeIP; M.SmeIP [H]
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSAVRPLEELSPLPAKADWLDDILKGDCVAALERLPEKSVDVIFADPPYNLQLEGALHRPDQSLVDAVDDEWDQFESFAA YDAFTRAWLLAARRVLKPNGTVWVIGSYHNIFRVGAIMQDLGFWILNDIVWRKTNPMPNFRGRRFQNAHETMIWASRDRN AKGYTFNYEAMKAANDDLQMRSDWLFPICTGKERLKDADGNKVHPTQKPEALLARVLLSSTKPGDVVLDPFFGSGTTGAV AKRLGRHFVGIERDPDYIAAARERIAAVEPLDQAALAPMAAKREEPRIAFASLLDSGLVKPGMQLYDSKRRWAAHVRADG TLAVGPETGSIHRLGARVQGLDACNGWTFWHYEEKGALKPIDELRQVARRGL
Sequences:
>Translated_372_residues MSAVRPLEELSPLPAKADWLDDILKGDCVAALERLPEKSVDVIFADPPYNLQLEGALHRPDQSLVDAVDDEWDQFESFAA YDAFTRAWLLAARRVLKPNGTVWVIGSYHNIFRVGAIMQDLGFWILNDIVWRKTNPMPNFRGRRFQNAHETMIWASRDRN AKGYTFNYEAMKAANDDLQMRSDWLFPICTGKERLKDADGNKVHPTQKPEALLARVLLSSTKPGDVVLDPFFGSGTTGAV AKRLGRHFVGIERDPDYIAAARERIAAVEPLDQAALAPMAAKREEPRIAFASLLDSGLVKPGMQLYDSKRRWAAHVRADG TLAVGPETGSIHRLGARVQGLDACNGWTFWHYEEKGALKPIDELRQVARRGL >Mature_371_residues SAVRPLEELSPLPAKADWLDDILKGDCVAALERLPEKSVDVIFADPPYNLQLEGALHRPDQSLVDAVDDEWDQFESFAAY DAFTRAWLLAARRVLKPNGTVWVIGSYHNIFRVGAIMQDLGFWILNDIVWRKTNPMPNFRGRRFQNAHETMIWASRDRNA KGYTFNYEAMKAANDDLQMRSDWLFPICTGKERLKDADGNKVHPTQKPEALLARVLLSSTKPGDVVLDPFFGSGTTGAVA KRLGRHFVGIERDPDYIAAARERIAAVEPLDQAALAPMAAKREEPRIAFASLLDSGLVKPGMQLYDSKRRWAAHVRADGT LAVGPETGSIHRLGARVQGLDACNGWTFWHYEEKGALKPIDELRQVARRGL
Specific function: This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. Ccrm-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication an
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=285, Percent_Identity=32.280701754386, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 41673; Mature: 41542
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVRPLEELSPLPAKADWLDDILKGDCVAALERLPEKSVDVIFADPPYNLQLEGALHRP CCCCCCHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCCC DQSLVDAVDDEWDQFESFAAYDAFTRAWLLAARRVLKPNGTVWVIGSYHNIFRVGAIMQD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH LGFWILNDIVWRKTNPMPNFRGRRFQNAHETMIWASRDRNAKGYTFNYEAMKAANDDLQM HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCEEEEHHHHHHCCCCHHH RSDWLFPICTGKERLKDADGNKVHPTQKPEALLARVLLSSTKPGDVVLDPFFGSGTTGAV HCCCCEEEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHH AKRLGRHFVGIERDPDYIAAARERIAAVEPLDQAALAPMAAKREEPRIAFASLLDSGLVK HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC PGMQLYDSKRRWAAHVRADGTLAVGPETGSIHRLGARVQGLDACNGWTFWHYEEKGALKP CCHHHHHHHHHHHHHEECCCEEEECCCCCCHHHHCCHHCCCCCCCCCEEEEECCCCCCCC IDELRQVARRGL HHHHHHHHHHCC >Mature Secondary Structure SAVRPLEELSPLPAKADWLDDILKGDCVAALERLPEKSVDVIFADPPYNLQLEGALHRP CCCCCHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCEEECCCCCCC DQSLVDAVDDEWDQFESFAAYDAFTRAWLLAARRVLKPNGTVWVIGSYHNIFRVGAIMQD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH LGFWILNDIVWRKTNPMPNFRGRRFQNAHETMIWASRDRNAKGYTFNYEAMKAANDDLQM HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCEEEEHHHHHHCCCCHHH RSDWLFPICTGKERLKDADGNKVHPTQKPEALLARVLLSSTKPGDVVLDPFFGSGTTGAV HCCCCEEEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHH AKRLGRHFVGIERDPDYIAAARERIAAVEPLDQAALAPMAAKREEPRIAFASLLDSGLVK HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC PGMQLYDSKRRWAAHVRADGTLAVGPETGSIHRLGARVQGLDACNGWTFWHYEEKGALKP CCHHHHHHHHHHHHHEECCCEEEECCCCCCHHHHCCHHCCCCCCCCCEEEEECCCCCCCC IDELRQVARRGL HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9294447; 11481430 [H]