| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yaiN [C]
Identifier: 110633113
GI number: 110633113
Start: 829560
End: 829832
Strand: Reverse
Name: yaiN [C]
Synonym: Meso_0756
Alternate gene names: 110633113
Gene position: 829832-829560 (Counterclockwise)
Preceding gene: 110633114
Following gene: 110633112
Centisome position: 18.81
GC content: 61.17
Gene sequence:
>273_bases ATGGCACATCTACAGAAGAACAATGCGAAACTGGTTGCGAGGGTTCGCCGACTGCGCGGCCAAATGGAGGCGGTGGAGCG GGCATTAGAGGGCGGCGCTCCCTGTGGCGAAGTTCTCCATCTCGTCGCTTCCGTGCGCGGTGCGGTCAACGGGCTTACGC TCGAACTCATGGAAGATCATATCCGCTTTCATGTCGTTGATCCGGACGGGGAGGCCCCTTCCGCCGAAGGCGCGGCGGAG CTCATTGCGGCGCTGCGCACCTATATGAAGTGA
Upstream 100 bases:
>100_bases CTCATGAAATACCAGCAATCGGGGCTACCTCTTCCCCGCCAAGGGAAGAGGAAACACACTCGCTTGCCATCGCCGCGCCT ATAGGGTACCCCCCTATGCT
Downstream 100 bases:
>100_bases GGGACCGATGAAAACGTATATGGATACCGATTCCTTCGGGCACGACCATGTCTTTCTGGGCGAGAGTCACAGGCGCAACG AGCGCCGCGTATGGCTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MAHLQKNNAKLVARVRRLRGQMEAVERALEGGAPCGEVLHLVASVRGAVNGLTLELMEDHIRFHVVDPDGEAPSAEGAAE LIAALRTYMK
Sequences:
>Translated_90_residues MAHLQKNNAKLVARVRRLRGQMEAVERALEGGAPCGEVLHLVASVRGAVNGLTLELMEDHIRFHVVDPDGEAPSAEGAAE LIAALRTYMK >Mature_89_residues AHLQKNNAKLVARVRRLRGQMEAVERALEGGAPCGEVLHLVASVRGAVNGLTLELMEDHIRFHVVDPDGEAPSAEGAAEL IAALRTYMK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=91, Percent_Identity=39.5604395604396, Blast_Score=69, Evalue=7e-14, Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=33.3333333333333, Blast_Score=59, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 9727; Mature: 9596
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLQKNNAKLVARVRRLRGQMEAVERALEGGAPCGEVLHLVASVRGAVNGLTLELMEDH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH IRFHVVDPDGEAPSAEGAAELIAALRTYMK HEEEEECCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure AHLQKNNAKLVARVRRLRGQMEAVERALEGGAPCGEVLHLVASVRGAVNGLTLELMEDH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH IRFHVVDPDGEAPSAEGAAELIAALRTYMK HEEEEECCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA