| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is exoO [H]
Identifier: 110633004
GI number: 110633004
Start: 723592
End: 724656
Strand: Reverse
Name: exoO [H]
Synonym: Meso_0647
Alternate gene names: 110633004
Gene position: 724656-723592 (Counterclockwise)
Preceding gene: 110633008
Following gene: 110633003
Centisome position: 16.42
GC content: 59.44
Gene sequence:
>1065_bases GTGCGAGCTAGCACCAAGGAAACCGGGCCGCTCGTCTCCGTCATCATGGCCAACTTCCGCAGCGCCGAATATCTCGCCGC CGCGCTCGATTCGGTTCTCGCGCAGACGATAGGCGATATAGAAGTGCTGGTTTCCGACGATGCTTCGCCCGATAACAGCA CAGATATCGTCCAGCATTATATGTCGCGGGATGCGCGCGTTAACCTGATCACGACCGACGAGAACAAAGGACCCGCCGCA GCCCGCAACCGAGCACTTGAAGCGGCTCGCGGCGAATGGATCGCCATCGTCGACTCCGACGATATCATCCATCCCCAAAG GCTCGAGATCTTGATTGCAATGGCCGAAGAGCTGGGGGCCGACGGGATTGCGGACGACCTGCTCTTCTTTTCCGACCAGG GTGCCGGGCCTACGCTGCTTGGCGCCACGGCGGCTCCCGAGCCGCTGGAGATAACGCCTTCTTATTTCATCCGCAGCAAC ACGTCAGGCAATGGACTTGCCCCGCTTGGTTATGTGAAGCCTCTTTTCAGGCGCGCGAAGCTCTCAGGGCTCAGCTATGA CGAAGCCGTGCGGATCGGCGAGGATTACGATTTCCTCCTGCGCTTTTTGCTTACCGGCGCGCGCTTCTACATCCTGCCGG ATCCGCTCTATCTCTATCGGCGGCATTCGCACTCGATCTCGCATCGGCTCTCCGAGAGCACGGTTCTGGCGATGATTACA AATCAGCAGAAATTGGTCGCAACTCATGGCAGCTTCTCACCGGAGATGGAGGACCTGCTTGAAAAGCGAATGGCCGCACT GCGGTCTATGCTTTCTTTTGAGCGTCTCGTGCTTGCGCTGAAAGAGCGGCGGGCCGGAAAGGCCGCCAAGCTCCTGGCAA AAAATCCCGGCCTTTTTCAGCCGCTCGCACGCTCCATCGCGGAAAACCTGCAGTCGCGTTTCCGGCCCCTTTTCGTTTCC GCACGGACGCAACCTTTCTGTCCAGGACACCTTATGGCCGAGCAGAAAGGCAGCTGGCGATCGCGGGAAAGCGTTACGCC GGCCGAGGGGATGAGCGGCAAGTGA
Upstream 100 bases:
>100_bases TGCTGCGACGCAGCGACGCCGCAATTTTTCGACCGGATGAAGGGGTCAGCGTGAGATGAAGCTCCTGGTGCTAATCCAAG TTCGAGGCGGGAACTGAGCC
Downstream 100 bases:
>100_bases CGGATAGTTCTGAAAAACGCAGGGAGATGACCGATGTCGAAAATGGCACTCGTTCAAGTCCGCACACCGACCTATAAGCG GCCGGAGGCGCTTCGCCGCT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRASTKETGPLVSVIMANFRSAEYLAAALDSVLAQTIGDIEVLVSDDASPDNSTDIVQHYMSRDARVNLITTDENKGPAA ARNRALEAARGEWIAIVDSDDIIHPQRLEILIAMAEELGADGIADDLLFFSDQGAGPTLLGATAAPEPLEITPSYFIRSN TSGNGLAPLGYVKPLFRRAKLSGLSYDEAVRIGEDYDFLLRFLLTGARFYILPDPLYLYRRHSHSISHRLSESTVLAMIT NQQKLVATHGSFSPEMEDLLEKRMAALRSMLSFERLVLALKERRAGKAAKLLAKNPGLFQPLARSIAENLQSRFRPLFVS ARTQPFCPGHLMAEQKGSWRSRESVTPAEGMSGK
Sequences:
>Translated_354_residues MRASTKETGPLVSVIMANFRSAEYLAAALDSVLAQTIGDIEVLVSDDASPDNSTDIVQHYMSRDARVNLITTDENKGPAA ARNRALEAARGEWIAIVDSDDIIHPQRLEILIAMAEELGADGIADDLLFFSDQGAGPTLLGATAAPEPLEITPSYFIRSN TSGNGLAPLGYVKPLFRRAKLSGLSYDEAVRIGEDYDFLLRFLLTGARFYILPDPLYLYRRHSHSISHRLSESTVLAMIT NQQKLVATHGSFSPEMEDLLEKRMAALRSMLSFERLVLALKERRAGKAAKLLAKNPGLFQPLARSIAENLQSRFRPLFVS ARTQPFCPGHLMAEQKGSWRSRESVTPAEGMSGK >Mature_354_residues MRASTKETGPLVSVIMANFRSAEYLAAALDSVLAQTIGDIEVLVSDDASPDNSTDIVQHYMSRDARVNLITTDENKGPAA ARNRALEAARGEWIAIVDSDDIIHPQRLEILIAMAEELGADGIADDLLFFSDQGAGPTLLGATAAPEPLEITPSYFIRSN TSGNGLAPLGYVKPLFRRAKLSGLSYDEAVRIGEDYDFLLRFLLTGARFYILPDPLYLYRRHSHSISHRLSESTVLAMIT NQQKLVATHGSFSPEMEDLLEKRMAALRSMLSFERLVLALKERRAGKAAKLLAKNPGLFQPLARSIAENLQSRFRPLFVS ARTQPFCPGHLMAEQKGSWRSRESVTPAEGMSGK
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fifth sugar (glucose), catalyzes the formation of a beta-1,6 linkage between the fourth and fifth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788372, Length=204, Percent_Identity=26.4705882352941, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790044, Length=106, Percent_Identity=33.9622641509434, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 38919; Mature: 38919
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASTKETGPLVSVIMANFRSAEYLAAALDSVLAQTIGDIEVLVSDDASPDNSTDIVQHY CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHH MSRDARVNLITTDENKGPAAARNRALEAARGEWIAIVDSDDIIHPQRLEILIAMAEELGA HCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC DGIADDLLFFSDQGAGPTLLGATAAPEPLEITPSYFIRSNTSGNGLAPLGYVKPLFRRAK CCCHHHHHEECCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH LSGLSYDEAVRIGEDYDFLLRFLLTGARFYILPDPLYLYRRHSHSISHRLSESTVLAMIT HCCCCHHHHHCCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEE NQQKLVATHGSFSPEMEDLLEKRMAALRSMLSFERLVLALKERRAGKAAKLLAKNPGLFQ CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHH PLARSIAENLQSRFRPLFVSARTQPFCPGHLMAEQKGSWRSRESVTPAEGMSGK HHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRASTKETGPLVSVIMANFRSAEYLAAALDSVLAQTIGDIEVLVSDDASPDNSTDIVQHY CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHH MSRDARVNLITTDENKGPAAARNRALEAARGEWIAIVDSDDIIHPQRLEILIAMAEELGA HCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC DGIADDLLFFSDQGAGPTLLGATAAPEPLEITPSYFIRSNTSGNGLAPLGYVKPLFRRAK CCCHHHHHEECCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH LSGLSYDEAVRIGEDYDFLLRFLLTGARFYILPDPLYLYRRHSHSISHRLSESTVLAMIT HCCCCHHHHHCCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEE NQQKLVATHGSFSPEMEDLLEKRMAALRSMLSFERLVLALKERRAGKAAKLLAKNPGLFQ CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHH PLARSIAENLQSRFRPLFVSARTQPFCPGHLMAEQKGSWRSRESVTPAEGMSGK HHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]