| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632998
Identifier: 110632998
GI number: 110632998
Start: 716796
End: 717872
Strand: Reverse
Name: 110632998
Synonym: Meso_0641
Alternate gene names: NA
Gene position: 717872-716796 (Counterclockwise)
Preceding gene: 110632999
Following gene: 110632997
Centisome position: 16.27
GC content: 64.53
Gene sequence:
>1077_bases ATGCTGAAGAGGATTGTCATCGGTCTGGGCGTCGTTTGCTGCACGCCTGCCATGGCGCAGGACGCGGCGCATGTTCCAGC CGATATCGGCTCGCGGGTGGTGAAGCAATATGTCGAGCCTGGGCTTGCCGCCTTCACAAAGGCGACGGCCGAGCTGGAGG ACAAGATTACCGCCCTCTGCGCAGCGCCCGCGGAGCCAGCGCTTCGAGACGCGCGCAGCGCATTCGCGGAGACCATCGGG GCATGGGGACCGGTCTCGATTTTGCGTTTCGGCCCCCTCACGCAGGAGAGCAGGTTCGAGCACATTTTCTTCTGGCCGGA TATACGCAGCGTCACGCTGCGCCAAGTGCAGGGCTTGCTTGCGCAACGGGACGAGCAGGCCGCCACGCCGATGGAGCTCA GGGAAAAGAGCGTGGCCGTGCAGGGCCTTCCGGCGCTGGAATTCCTGCTTTATGGCGCCGGCTCCGAAGAGCTTGCCTTA AAAGGCGGGGACTACCGCTGCCGCTATGCCGGAGCGATCGCTGCCAACCTCGCCCAGCTTGCCGGGGAGATCGCGGCGGC CTGGGATCAGGACTCCCCCTTCAACGCTGCGTTCACCCGCCCTTCCGCTGACAGCGCCCTCTACCGTTCACCCTCCGAAG TAGCCTCCGAAATCGTGAAGGCGCTTGGCACCTCTCTTCAGTTCACGCGCGATGCCGAGCTTCTGCCCGCGCTCGGCGAC AGCATGGAGAAGGCCAATGGCCGCCGCGCGCCCTTCTGGCGCTCCAACCTCACATTCGCGCTGCTCGATGCCCAGTTGGA GGGCATGATTGAGCTCCTTGGGGCAGCAGGCTTCGATGAGGAACTGGACGACGATGGCCGCGCCATCCTAGACACCATGC TGTTCGACCTGAAGCATGCCCGGAATGCCCTTGCGGAGGTAAATGCGCCGGCGGAGGCGGCTTTCGGAGGGGAAGAAACA CGCGGCAGCATCGCCTATGCCGCGGTCGCGCTGCAGGGGGCGAACCGCACGCTTGGCGAGCAGCTTTCGGCGGCAATCGG ATTGACGATGGGGTTCAATGCGCTCGACGGTGATTGA
Upstream 100 bases:
>100_bases TCCTCTGGCATGGCGGCGAAGCGGAGGCCGCCCGCGAAAAGGTGGTGGAGATGGAAAAGGCTGAACGCGAAAACCTCATC CGATTTCTGGAGTCGCTTTG
Downstream 100 bases:
>100_bases TCGCAGGACGTTTCTTGCCCTTGCGGGCGGAGCGATGTTTGCGCCTTCCAGCGGGAATGCGGCGGAAGAAGCGTTGTTCC TCGGCGCGCGGTTGAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MLKRIVIGLGVVCCTPAMAQDAAHVPADIGSRVVKQYVEPGLAAFTKATAELEDKITALCAAPAEPALRDARSAFAETIG AWGPVSILRFGPLTQESRFEHIFFWPDIRSVTLRQVQGLLAQRDEQAATPMELREKSVAVQGLPALEFLLYGAGSEELAL KGGDYRCRYAGAIAANLAQLAGEIAAAWDQDSPFNAAFTRPSADSALYRSPSEVASEIVKALGTSLQFTRDAELLPALGD SMEKANGRRAPFWRSNLTFALLDAQLEGMIELLGAAGFDEELDDDGRAILDTMLFDLKHARNALAEVNAPAEAAFGGEET RGSIAYAAVALQGANRTLGEQLSAAIGLTMGFNALDGD
Sequences:
>Translated_358_residues MLKRIVIGLGVVCCTPAMAQDAAHVPADIGSRVVKQYVEPGLAAFTKATAELEDKITALCAAPAEPALRDARSAFAETIG AWGPVSILRFGPLTQESRFEHIFFWPDIRSVTLRQVQGLLAQRDEQAATPMELREKSVAVQGLPALEFLLYGAGSEELAL KGGDYRCRYAGAIAANLAQLAGEIAAAWDQDSPFNAAFTRPSADSALYRSPSEVASEIVKALGTSLQFTRDAELLPALGD SMEKANGRRAPFWRSNLTFALLDAQLEGMIELLGAAGFDEELDDDGRAILDTMLFDLKHARNALAEVNAPAEAAFGGEET RGSIAYAAVALQGANRTLGEQLSAAIGLTMGFNALDGD >Mature_358_residues MLKRIVIGLGVVCCTPAMAQDAAHVPADIGSRVVKQYVEPGLAAFTKATAELEDKITALCAAPAEPALRDARSAFAETIG AWGPVSILRFGPLTQESRFEHIFFWPDIRSVTLRQVQGLLAQRDEQAATPMELREKSVAVQGLPALEFLLYGAGSEELAL KGGDYRCRYAGAIAANLAQLAGEIAAAWDQDSPFNAAFTRPSADSALYRSPSEVASEIVKALGTSLQFTRDAELLPALGD SMEKANGRRAPFWRSNLTFALLDAQLEGMIELLGAAGFDEELDDDGRAILDTMLFDLKHARNALAEVNAPAEAAFGGEET RGSIAYAAVALQGANRTLGEQLSAAIGLTMGFNALDGD
Specific function: Unknown
COG id: COG3489
COG function: function code R; Predicted periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38074; Mature: 38074
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRIVIGLGVVCCTPAMAQDAAHVPADIGSRVVKQYVEPGLAAFTKATAELEDKITALC CCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAPAEPALRDARSAFAETIGAWGPVSILRFGPLTQESRFEHIFFWPDIRSVTLRQVQGLL CCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHH AQRDEQAATPMELREKSVAVQGLPALEFLLYGAGSEELALKGGDYRCRYAGAIAANLAQL HHCHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCEEEEEHHHHHHHHHHH AGEIAAAWDQDSPFNAAFTRPSADSALYRSPSEVASEIVKALGTSLQFTRDAELLPALGD HHHHHHHCCCCCCCCCEECCCCCCHHHHCCHHHHHHHHHHHHCCCCEECCCCHHHHHHCC SMEKANGRRAPFWRSNLTFALLDAQLEGMIELLGAAGFDEELDDDGRAILDTMLFDLKHA HHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH RNALAEVNAPAEAAFGGEETRGSIAYAAVALQGANRTLGEQLSAAIGLTMGFNALDGD HHHHHHCCCCHHHHCCCCCCCCHHEEHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLKRIVIGLGVVCCTPAMAQDAAHVPADIGSRVVKQYVEPGLAAFTKATAELEDKITALC CCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAPAEPALRDARSAFAETIGAWGPVSILRFGPLTQESRFEHIFFWPDIRSVTLRQVQGLL CCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHH AQRDEQAATPMELREKSVAVQGLPALEFLLYGAGSEELALKGGDYRCRYAGAIAANLAQL HHCHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCEEEEEHHHHHHHHHHH AGEIAAAWDQDSPFNAAFTRPSADSALYRSPSEVASEIVKALGTSLQFTRDAELLPALGD HHHHHHHCCCCCCCCCEECCCCCCHHHHCCHHHHHHHHHHHHCCCCEECCCCHHHHHHCC SMEKANGRRAPFWRSNLTFALLDAQLEGMIELLGAAGFDEELDDDGRAILDTMLFDLKHA HHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH RNALAEVNAPAEAAFGGEETRGSIAYAAVALQGANRTLGEQLSAAIGLTMGFNALDGD HHHHHHCCCCHHHHCCCCCCCCHHEEHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA