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The map label for this gene is 110632969

Identifier: 110632969

GI number: 110632969

Start: 686590

End: 687105

Strand: Reverse

Name: 110632969

Synonym: Meso_0612

Alternate gene names: NA

Gene position: 687105-686590 (Counterclockwise)

Preceding gene: 110632970

Following gene: 110632967

Centisome position: 15.57

GC content: 61.63

Gene sequence:

>516_bases
ATGCGGTCCAGTAACATGCATTTCGGCGGAAATTCACGCTTCCCGGCGCGCCTGATCCGGACGGTGTCCTTTGCACTCGG
CACATCCCTGCTTGTTGCAGGCTGCCAAACCTCATCGCTCGACGCCAGCATGGGCATGGAGAGCGGCAAAACACGGAGCG
GCGGCGTCGCCGGGGATGACCTCAGCGTCGGGAAAGCCCATTTTCGCGACGGCAATTACGGTCTGGCGGAAGCGCATTTC
AGAAAGGCTGTCGAATTGCAGCCGGACGACGCGGAGGCATGGCTCGGGCTTGCCGCCACCTATGACCAGCTTGGCCGGTT
CGATCTGGCCGACCGCGCCTATGAGGAACTGTTAGGGCTGGCGGGACGGCGCCCGCGCATCATCAACAATATCGGATATT
CCCATCTTCTGCGGGGGGATCGCAAGCGGGCTCGCGAATTGCTGATGGAAGCGAATGCCGCCCTGCCTGGAGACCCAGTG
GTGCAGGCCAACTTGGCCCTGCTGAACAAATCGTAA

Upstream 100 bases:

>100_bases
ACGCGCCTTGCGGTGCCCGCGAACCGTGAGCAGTATCGCAAAGCGCCGGCGGAGGGCGAAGGGGCTTATGCGGGCGAAGT
GATGTCTCAGACCAATAGTG

Downstream 100 bases:

>100_bases
CACGTTCCGCCGGAAAGCGGCAGGAGCGGTCCGCTCCCGCCTTCTACTCGATGATAGCGATCGTGCGGCCGACCAAGATC
TCGTTTGTCTTGTCGGCGCA

Product: tetratricopeptide TPR_2

Products: NA

Alternate protein names: Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRSSNMHFGGNSRFPARLIRTVSFALGTSLLVAGCQTSSLDASMGMESGKTRSGGVAGDDLSVGKAHFRDGNYGLAEAHF
RKAVELQPDDAEAWLGLAATYDQLGRFDLADRAYEELLGLAGRRPRIINNIGYSHLLRGDRKRARELLMEANAALPGDPV
VQANLALLNKS

Sequences:

>Translated_171_residues
MRSSNMHFGGNSRFPARLIRTVSFALGTSLLVAGCQTSSLDASMGMESGKTRSGGVAGDDLSVGKAHFRDGNYGLAEAHF
RKAVELQPDDAEAWLGLAATYDQLGRFDLADRAYEELLGLAGRRPRIINNIGYSHLLRGDRKRARELLMEANAALPGDPV
VQANLALLNKS
>Mature_171_residues
MRSSNMHFGGNSRFPARLIRTVSFALGTSLLVAGCQTSSLDASMGMESGKTRSGGVAGDDLSVGKAHFRDGNYGLAEAHF
RKAVELQPDDAEAWLGLAATYDQLGRFDLADRAYEELLGLAGRRPRIINNIGYSHLLRGDRKRARELLMEANAALPGDPV
VQANLALLNKS

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18432; Mature: 18432

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSNMHFGGNSRFPARLIRTVSFALGTSLLVAGCQTSSLDASMGMESGKTRSGGVAGDD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCC
LSVGKAHFRDGNYGLAEAHFRKAVELQPDDAEAWLGLAATYDQLGRFDLADRAYEELLGL
CCCCHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
AGRRPRIINNIGYSHLLRGDRKRARELLMEANAALPGDPVVQANLALLNKS
CCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEHHHEEECCC
>Mature Secondary Structure
MRSSNMHFGGNSRFPARLIRTVSFALGTSLLVAGCQTSSLDASMGMESGKTRSGGVAGDD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCC
LSVGKAHFRDGNYGLAEAHFRKAVELQPDDAEAWLGLAATYDQLGRFDLADRAYEELLGL
CCCCHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
AGRRPRIINNIGYSHLLRGDRKRARELLMEANAALPGDPVVQANLALLNKS
CCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA