Click here to switch to the map view.

The map label for this gene is 110632966

Identifier: 110632966

GI number: 110632966

Start: 683701

End: 684504

Strand: Reverse

Name: 110632966

Synonym: Meso_0609

Alternate gene names: NA

Gene position: 684504-683701 (Counterclockwise)

Preceding gene: 110632967

Following gene: 110632965

Centisome position: 15.51

GC content: 65.17

Gene sequence:

>804_bases
ATGGTTCGTATTCTCATTCTCCTCTTCGCGCTCGGCTCAGGCGGTATCGCCGCCTGGCTGGCGATGGGAACCGCTGAGCC
GACTGCTTCACAACCGGCTGCGGCAGTCGAGCAGGAAGCTGATCCTGCGCGGGAAGTGCTGGTCGCGGGTGCCGACCTTG
TGCATGGCTCGGTGCTTGACGAGAGCCACCTGCGCTGGCAGCCCTGGACTGCAGGCACCGTGCCCGCGGTCTTCATTAGC
CGCGCCGCAAAGCCGGACGCGCCGCAGGCGCTGAAAGGCTCGCTGGTGCGCGGCGGCTTCGTGGCCGGAGAGCCGATCCG
GGAAGACCGCCTGGCCCTGCCCGGAGCAGGTTTCCTTTCCGGCCAGCTTCCTTCGGGAAAAAGGGCCATTGCCGTACGTG
TCACCGCTGAAAGCGCGGCAGGCGGATTCATCCTGCCCAACGACAGGGTCGATCTCATCCATACCTCAGTGCTCTCGGGC
CAATCGGGCGGCGAGCAGGTTTCCAGCCGCACGATCCTGTCGAATATCAGAGTGCTCGCCGTCGACCAGAACGCCTCCGG
CGAGAGCGACGGTGAGGCCGTTGTTGCCAAGACCGCGACACTAGAGGTGGAACCCGATCAGATCCCCATCGTCACGGCGG
CGGAAGCTTCCGGCACGATCTCACTCGCGTTGAGGGCCGCCTCCGACGAGGACGAGCCTGCGGCTGCCGTTCAGGCGGGA
AAGCACACAAAGAAGGTGCGGATCTTCGGCGGCGCCACTTCCAGAACGGTCGAGGTACCGTCCTTTGCTCACGAAGGCAG
CTAG

Upstream 100 bases:

>100_bases
GCGCGGCTCTTGCCGGGGCAGCCCTGCTCCTCCTGCCGGAAACCGCCCTATTCGCGGCCCTGACCTGACGACGGCGCAAC
CCCATACGAGGATCTAGGCA

Downstream 100 bases:

>100_bases
GAACGAATTGAAATGATGCTGATTACGACCGAAAAGCAGGATACGGAAACGGCGGAGCCGGGCGCCCTGCACGCCATTCC
GAAGATTGACATCACCGCTT

Product: putative CpaB2 pilus assembly protein

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; CtpC Protein; Flp Pilus Assembly Protein Cpab; Flp Pilus Assembly Protein CpaB-Like Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; Flp Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Pilus Assembly Domain-Containing Protein; CpaB2 Pilus Assembly Protein; CpaB Family Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; SAF Domain Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MVRILILLFALGSGGIAAWLAMGTAEPTASQPAAAVEQEADPAREVLVAGADLVHGSVLDESHLRWQPWTAGTVPAVFIS
RAAKPDAPQALKGSLVRGGFVAGEPIREDRLALPGAGFLSGQLPSGKRAIAVRVTAESAAGGFILPNDRVDLIHTSVLSG
QSGGEQVSSRTILSNIRVLAVDQNASGESDGEAVVAKTATLEVEPDQIPIVTAAEASGTISLALRAASDEDEPAAAVQAG
KHTKKVRIFGGATSRTVEVPSFAHEGS

Sequences:

>Translated_267_residues
MVRILILLFALGSGGIAAWLAMGTAEPTASQPAAAVEQEADPAREVLVAGADLVHGSVLDESHLRWQPWTAGTVPAVFIS
RAAKPDAPQALKGSLVRGGFVAGEPIREDRLALPGAGFLSGQLPSGKRAIAVRVTAESAAGGFILPNDRVDLIHTSVLSG
QSGGEQVSSRTILSNIRVLAVDQNASGESDGEAVVAKTATLEVEPDQIPIVTAAEASGTISLALRAASDEDEPAAAVQAG
KHTKKVRIFGGATSRTVEVPSFAHEGS
>Mature_267_residues
MVRILILLFALGSGGIAAWLAMGTAEPTASQPAAAVEQEADPAREVLVAGADLVHGSVLDESHLRWQPWTAGTVPAVFIS
RAAKPDAPQALKGSLVRGGFVAGEPIREDRLALPGAGFLSGQLPSGKRAIAVRVTAESAAGGFILPNDRVDLIHTSVLSG
QSGGEQVSSRTILSNIRVLAVDQNASGESDGEAVVAKTATLEVEPDQIPIVTAAEASGTISLALRAASDEDEPAAAVQAG
KHTKKVRIFGGATSRTVEVPSFAHEGS

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27332; Mature: 27332

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRILILLFALGSGGIAAWLAMGTAEPTASQPAAAVEQEADPAREVLVAGADLVHGSVLD
CCEEEEEEHHHCCCCCEEEEEECCCCCCCCCCHHHHHHCCCHHHHHHHHCCHHEECCCCC
ESHLRWQPWTAGTVPAVFISRAAKPDAPQALKGSLVRGGFVAGEPIREDRLALPGAGFLS
CCCCEECCCCCCCHHHHHHHHCCCCCCCHHHHCCCEECCEECCCCCCCCCCCCCCCCCCC
GQLPSGKRAIAVRVTAESAAGGFILPNDRVDLIHTSVLSGQSGGEQVSSRTILSNIRVLA
CCCCCCCEEEEEEEEECCCCCCEECCCCCEEEEEEEHHCCCCCCHHHHHHHHHHCCEEEE
VDQNASGESDGEAVVAKTATLEVEPDQIPIVTAAEASGTISLALRAASDEDEPAAAVQAG
EECCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHCC
KHTKKVRIFGGATSRTVEVPSFAHEGS
CCCEEEEEEECCCCCEEECCCCCCCCC
>Mature Secondary Structure
MVRILILLFALGSGGIAAWLAMGTAEPTASQPAAAVEQEADPAREVLVAGADLVHGSVLD
CCEEEEEEHHHCCCCCEEEEEECCCCCCCCCCHHHHHHCCCHHHHHHHHCCHHEECCCCC
ESHLRWQPWTAGTVPAVFISRAAKPDAPQALKGSLVRGGFVAGEPIREDRLALPGAGFLS
CCCCEECCCCCCCHHHHHHHHCCCCCCCHHHHCCCEECCEECCCCCCCCCCCCCCCCCCC
GQLPSGKRAIAVRVTAESAAGGFILPNDRVDLIHTSVLSGQSGGEQVSSRTILSNIRVLA
CCCCCCCEEEEEEEEECCCCCCEECCCCCEEEEEEEHHCCCCCCHHHHHHHHHHCCEEEE
VDQNASGESDGEAVVAKTATLEVEPDQIPIVTAAEASGTISLALRAASDEDEPAAAVQAG
EECCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHCC
KHTKKVRIFGGATSRTVEVPSFAHEGS
CCCEEEEEEECCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA