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The map label for this gene is gspE [C]

Identifier: 110632961

GI number: 110632961

Start: 679030

End: 680460

Strand: Reverse

Name: gspE [C]

Synonym: Meso_0604

Alternate gene names: 110632961

Gene position: 680460-679030 (Counterclockwise)

Preceding gene: 110632962

Following gene: 110632960

Centisome position: 15.42

GC content: 63.17

Gene sequence:

>1431_bases
ATGATTGGCAGAAAATCCGCCTCCCAGGTGCAGGCCATCGAACAGCCCGCCGTTCAAGCGCCGATCACGCGCCGCGCACC
TGAACCCGCAAACCAGTCAGAAAAGCTTCCCGCGACGGCTCCGGCCGCTTCTTTCGCCGAGAAGCCCAGCAGCTATTACG
AGCTGAAGAAGGAAGTCTTCAGCGCACTCATTGCCGCAATCGATGTCGCCGCGCTCTCAGTCATGGAGCAGTCGCAGGCG
CGCAAGGAAATCGGCGCCATCATCAACGATATCGTTGCCGCCAAAAGGGCCGGCATCTCGCAAGCCGAGCAGAATGACCT
GCTTCGCGACATCTGCGACGACATTCTTGGATACGGTCCGCTGGAGCCGCTGCTTGCGCGCGATGACATCGCCGACATCA
TGGTCAATGGCGCCAACCAGGTCTTTATCGAGGTCGGCGGTCAGGTTCAGGAAAGCGGCATCCGCTTCCGCGACAACGAG
CAGCTTCTGAACATCTGCCAGCGCATCGTGAGCCAGGTCGGCCGCCGCGTCGATGAATCCAGCCCGATCTGCGACGCGCG
TCTGGCGGACGGCTCGCGTGTCAACGTCATTGCGCCGCCGCTCGCCATCGATGGCCCGGCCCTGACGATCCGCAAGTTCA
GGAAAGACAAGCTCACACTCGATCAGCTCGTCACGTTCGGATCCATTACGCCGGAAGGCGCGGAACTTTTGAAGATTATC
GGCCGCGTGCGCTGCAATGTGCTGATCTCCGGCGGAACAGGCTCCGGCAAGACGACGCTTCTGAACTGCCTGACCGGCTA
CATCGATGACGGCGAGCGCATCGTCACCTGCGAAGACGCCGCCGAGCTTCAGCTTCAGCAGCCGCATGTGGTGCGCCTGG
AAACCCGCCCGCCCAACATCGAGGGCCAGGGCGAGATCACAATGCGCAACCTGGTGAAGAACTGCCTGCGCATGCGCCCC
GAACGCATCATCGTCGGCGAGGTCCGCGGACCCGAAGCCTTCGACCTCCTGCAAGCCATGAACACCGGCCATGACGGCTC
GATGGGAACCCTGCACGCCAACTCGCCGCGCGAGGCTATCTCGCGCCTGGAATCCATGATCACCACAGGCGGCTTCACGC
TGCCCTCCAAGACGATCCGGGAGATGATCGTTTCTTCAGTGGACGTCATCGTTCAGGCCGCGCGTCTGCGCGACGGATCG
CGGCGCATAACCCACATCACCGAAGTGCTGGGAATGGAAGGCGATGTCGTCATCACCCAGGACCTCTTCGTCTATGACAT
CCTCGGCGAGGATGCCAATGGCAGGCTGATCGGGCGGCATCGCTCGACCGGCATCGGCCGTCCGGCCTTCTGGGACCGCG
CGCGCTACTACGGCGAAGAGGCCCGCCTGGCGGCAGCGCTGGACGCCGCGGAAGCGAAGGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
TTAAGTCACTCAGGACACAAGAAATTTGGGGGGATGAGAATCCCCCCCTTTTTTCCCCCAGGCACATAGCGGGCAGACCC
TCTCTTCAAAGGCAGGAACG

Downstream 100 bases:

>100_bases
CCCCCCTGGGAGAAAATCAATGGATCTGAGCACGGCGCTGGGGCCCACCCTCTTCCCACTGATGGTCTTCGCATTCGCCA
CGCTTAGCGTCGGCGGCGTG

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MIGRKSASQVQAIEQPAVQAPITRRAPEPANQSEKLPATAPAASFAEKPSSYYELKKEVFSALIAAIDVAALSVMEQSQA
RKEIGAIINDIVAAKRAGISQAEQNDLLRDICDDILGYGPLEPLLARDDIADIMVNGANQVFIEVGGQVQESGIRFRDNE
QLLNICQRIVSQVGRRVDESSPICDARLADGSRVNVIAPPLAIDGPALTIRKFRKDKLTLDQLVTFGSITPEGAELLKII
GRVRCNVLISGGTGSGKTTLLNCLTGYIDDGERIVTCEDAAELQLQQPHVVRLETRPPNIEGQGEITMRNLVKNCLRMRP
ERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSPREAISRLESMITTGGFTLPSKTIREMIVSSVDVIVQAARLRDGS
RRITHITEVLGMEGDVVITQDLFVYDILGEDANGRLIGRHRSTGIGRPAFWDRARYYGEEARLAAALDAAEAKAAA

Sequences:

>Translated_476_residues
MIGRKSASQVQAIEQPAVQAPITRRAPEPANQSEKLPATAPAASFAEKPSSYYELKKEVFSALIAAIDVAALSVMEQSQA
RKEIGAIINDIVAAKRAGISQAEQNDLLRDICDDILGYGPLEPLLARDDIADIMVNGANQVFIEVGGQVQESGIRFRDNE
QLLNICQRIVSQVGRRVDESSPICDARLADGSRVNVIAPPLAIDGPALTIRKFRKDKLTLDQLVTFGSITPEGAELLKII
GRVRCNVLISGGTGSGKTTLLNCLTGYIDDGERIVTCEDAAELQLQQPHVVRLETRPPNIEGQGEITMRNLVKNCLRMRP
ERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSPREAISRLESMITTGGFTLPSKTIREMIVSSVDVIVQAARLRDGS
RRITHITEVLGMEGDVVITQDLFVYDILGEDANGRLIGRHRSTGIGRPAFWDRARYYGEEARLAAALDAAEAKAAA
>Mature_476_residues
MIGRKSASQVQAIEQPAVQAPITRRAPEPANQSEKLPATAPAASFAEKPSSYYELKKEVFSALIAAIDVAALSVMEQSQA
RKEIGAIINDIVAAKRAGISQAEQNDLLRDICDDILGYGPLEPLLARDDIADIMVNGANQVFIEVGGQVQESGIRFRDNE
QLLNICQRIVSQVGRRVDESSPICDARLADGSRVNVIAPPLAIDGPALTIRKFRKDKLTLDQLVTFGSITPEGAELLKII
GRVRCNVLISGGTGSGKTTLLNCLTGYIDDGERIVTCEDAAELQLQQPHVVRLETRPPNIEGQGEITMRNLVKNCLRMRP
ERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSPREAISRLESMITTGGFTLPSKTIREMIVSSVDVIVQAARLRDGS
RRITHITEVLGMEGDVVITQDLFVYDILGEDANGRLIGRHRSTGIGRPAFWDRARYYGEEARLAAALDAAEAKAAA

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 51621; Mature: 51621

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRKSASQVQAIEQPAVQAPITRRAPEPANQSEKLPATAPAASFAEKPSSYYELKKEVF
CCCCCCHHHHHHHHCCHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHH
SALIAAIDVAALSVMEQSQARKEIGAIINDIVAAKRAGISQAEQNDLLRDICDDILGYGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
LEPLLARDDIADIMVNGANQVFIEVGGQVQESGIRFRDNEQLLNICQRIVSQVGRRVDES
CCHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
SPICDARLADGSRVNVIAPPLAIDGPALTIRKFRKDKLTLDQLVTFGSITPEGAELLKII
CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH
GRVRCNVLISGGTGSGKTTLLNCLTGYIDDGERIVTCEDAAELQLQQPHVVRLETRPPNI
HHCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHCEECCCCEEEEECCCCCC
EGQGEITMRNLVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSPREAI
CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHH
SRLESMITTGGFTLPSKTIREMIVSSVDVIVQAARLRDGSRRITHITEVLGMEGDVVITQ
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEC
DLFVYDILGEDANGRLIGRHRSTGIGRPAFWDRARYYGEEARLAAALDAAEAKAAA
CEEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGRKSASQVQAIEQPAVQAPITRRAPEPANQSEKLPATAPAASFAEKPSSYYELKKEVF
CCCCCCHHHHHHHHCCHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHH
SALIAAIDVAALSVMEQSQARKEIGAIINDIVAAKRAGISQAEQNDLLRDICDDILGYGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
LEPLLARDDIADIMVNGANQVFIEVGGQVQESGIRFRDNEQLLNICQRIVSQVGRRVDES
CCHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
SPICDARLADGSRVNVIAPPLAIDGPALTIRKFRKDKLTLDQLVTFGSITPEGAELLKII
CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH
GRVRCNVLISGGTGSGKTTLLNCLTGYIDDGERIVTCEDAAELQLQQPHVVRLETRPPNI
HHCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHCEECCCCEEEEECCCCCC
EGQGEITMRNLVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSPREAI
CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHH
SRLESMITTGGFTLPSKTIREMIVSSVDVIVQAARLRDGSRRITHITEVLGMEGDVVITQ
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEC
DLFVYDILGEDANGRLIGRHRSTGIGRPAFWDRARYYGEEARLAAALDAAEAKAAA
CEEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]