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The map label for this gene is 110632960

Identifier: 110632960

GI number: 110632960

Start: 677994

End: 679010

Strand: Reverse

Name: 110632960

Synonym: Meso_0603

Alternate gene names: NA

Gene position: 679010-677994 (Counterclockwise)

Preceding gene: 110632961

Following gene: 110632959

Centisome position: 15.39

GC content: 62.64

Gene sequence:

>1017_bases
ATGGATCTGAGCACGGCGCTGGGGCCCACCCTCTTCCCACTGATGGTCTTCGCATTCGCCACGCTTAGCGTCGGCGGCGT
GGCAGCCGCCCTGTTCTATCCGCAGTTCGCCAAGGCAAGCCCCTTCCGCAGGCGCTTCCAGGGCCTGGCCGCCTTGGGCG
AGGAAGAGGAGAGCACCGCACCGGCAGACGAAGACAGGGACCGCCGCAAATCGGTCGAGAAGACGCTGCGGGAACTCGAG
GAAAAGCAGAAGGCCAAGACAAGGAAAGCCGGAAAGCCAACACTGAGCGGCAGGCTGCGGCAAGCCGGCCTGAGCTGGAA
CAGGCGAGCCTATTTCACCGCCTGCGCGGTCTGTGGCGCCCTCACCTTTCCGGTGGCGCTTCTCCTCGGGGCGGGCAGTC
TCGTTTCCGTCGGCTTTGCGCTGGCCGGGGGACTGCTGTTGCCGCATTTCTACGTGGCGAGCCGCCGCAAGCGGCGCTTC
AAGCAGTTTACCAACGAATTCTCCAATGCGGTGGACGTGATCGTGCGCGGCCTGAAATCGGGCTTGCCGGTGGGAGACTG
CCTTCGCATCATCGCCGCCGAGGCACAGGAGCCGGTCAAAAGCGAATTTGTCGCGATCGTGCAGGACCAGACGCTTGGCA
TTTCCCTCGACGAGGCCGTACAGCGGCTATGGGAGCGCGTGCCGCTTGCGGAAGCAAACTTCTTCGCAATTGTGGTGGGC
CTTCAAAGCCGGACCGGCGGCAGCCTGGCGGAAGCGCTCGGGAACCTTTCCAAGGTCCTGCGCGAGCGCAAGAAGATGAG
CGCCAAGATCAGGGCTATGAGCTCGGAAGCCAAATCCTCGGCTGGCATTATCGGCGCCCTGCCGTTCTTCGTATCGGCGG
CCATCTACCTGACCAGCCCAGACTATATGTCGCTTCTGTTCAGCACCCTCACGGGAAAGCTCGTGCTCGCAGGCTGCGCA
CTCTGGATGGGCATGGGCATCCTCGTCATGCGCAAGATGATCAATTTCGATTTTTGA

Upstream 100 bases:

>100_bases
TGGGACCGCGCGCGCTACTACGGCGAAGAGGCCCGCCTGGCGGCAGCGCTGGACGCCGCGGAAGCGAAGGCCGCGGCCTG
ACCCCCCTGGGAGAAAATCA

Downstream 100 bases:

>100_bases
GGGCGATATGAGCCTGGCTTCCTACATCCCCGAACCCGGACAGCTTTCCGCCCTGATGGCGGCGGTGGCGGCGTTTTCGT
CCGTCATCGTGGTTTCCTGG

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; TadB Protein; Integral Membrane Protein; Type II Secretion System Protein F; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Flp Pilus Assembly Protein TadB-Like Protein; Secretion System Protein; Type II Secretion System; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Transmembrane Pilus Component Protein; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MDLSTALGPTLFPLMVFAFATLSVGGVAAALFYPQFAKASPFRRRFQGLAALGEEEESTAPADEDRDRRKSVEKTLRELE
EKQKAKTRKAGKPTLSGRLRQAGLSWNRRAYFTACAVCGALTFPVALLLGAGSLVSVGFALAGGLLLPHFYVASRRKRRF
KQFTNEFSNAVDVIVRGLKSGLPVGDCLRIIAAEAQEPVKSEFVAIVQDQTLGISLDEAVQRLWERVPLAEANFFAIVVG
LQSRTGGSLAEALGNLSKVLRERKKMSAKIRAMSSEAKSSAGIIGALPFFVSAAIYLTSPDYMSLLFSTLTGKLVLAGCA
LWMGMGILVMRKMINFDF

Sequences:

>Translated_338_residues
MDLSTALGPTLFPLMVFAFATLSVGGVAAALFYPQFAKASPFRRRFQGLAALGEEEESTAPADEDRDRRKSVEKTLRELE
EKQKAKTRKAGKPTLSGRLRQAGLSWNRRAYFTACAVCGALTFPVALLLGAGSLVSVGFALAGGLLLPHFYVASRRKRRF
KQFTNEFSNAVDVIVRGLKSGLPVGDCLRIIAAEAQEPVKSEFVAIVQDQTLGISLDEAVQRLWERVPLAEANFFAIVVG
LQSRTGGSLAEALGNLSKVLRERKKMSAKIRAMSSEAKSSAGIIGALPFFVSAAIYLTSPDYMSLLFSTLTGKLVLAGCA
LWMGMGILVMRKMINFDF
>Mature_338_residues
MDLSTALGPTLFPLMVFAFATLSVGGVAAALFYPQFAKASPFRRRFQGLAALGEEEESTAPADEDRDRRKSVEKTLRELE
EKQKAKTRKAGKPTLSGRLRQAGLSWNRRAYFTACAVCGALTFPVALLLGAGSLVSVGFALAGGLLLPHFYVASRRKRRF
KQFTNEFSNAVDVIVRGLKSGLPVGDCLRIIAAEAQEPVKSEFVAIVQDQTLGISLDEAVQRLWERVPLAEANFFAIVVG
LQSRTGGSLAEALGNLSKVLRERKKMSAKIRAMSSEAKSSAGIIGALPFFVSAAIYLTSPDYMSLLFSTLTGKLVLAGCA
LWMGMGILVMRKMINFDF

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36642; Mature: 36642

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSTALGPTLFPLMVFAFATLSVGGVAAALFYPQFAKASPFRRRFQGLAALGEEEESTA
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PADEDRDRRKSVEKTLRELEEKQKAKTRKAGKPTLSGRLRQAGLSWNRRAYFTACAVCGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
LTFPVALLLGAGSLVSVGFALAGGLLLPHFYVASRRKRRFKQFTNEFSNAVDVIVRGLKS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLPVGDCLRIIAAEAQEPVKSEFVAIVQDQTLGISLDEAVQRLWERVPLAEANFFAIVVG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEE
LQSRTGGSLAEALGNLSKVLRERKKMSAKIRAMSSEAKSSAGIIGALPFFVSAAIYLTSP
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
DYMSLLFSTLTGKLVLAGCALWMGMGILVMRKMINFDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDLSTALGPTLFPLMVFAFATLSVGGVAAALFYPQFAKASPFRRRFQGLAALGEEEESTA
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PADEDRDRRKSVEKTLRELEEKQKAKTRKAGKPTLSGRLRQAGLSWNRRAYFTACAVCGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
LTFPVALLLGAGSLVSVGFALAGGLLLPHFYVASRRKRRFKQFTNEFSNAVDVIVRGLKS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLPVGDCLRIIAAEAQEPVKSEFVAIVQDQTLGISLDEAVQRLWERVPLAEANFFAIVVG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEE
LQSRTGGSLAEALGNLSKVLRERKKMSAKIRAMSSEAKSSAGIIGALPFFVSAAIYLTSP
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
DYMSLLFSTLTGKLVLAGCALWMGMGILVMRKMINFDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA