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The map label for this gene is 110632959

Identifier: 110632959

GI number: 110632959

Start: 677015

End: 677986

Strand: Reverse

Name: 110632959

Synonym: Meso_0602

Alternate gene names: NA

Gene position: 677986-677015 (Counterclockwise)

Preceding gene: 110632960

Following gene: 110632947

Centisome position: 15.37

GC content: 61.63

Gene sequence:

>972_bases
ATGAGCCTGGCTTCCTACATCCCCGAACCCGGACAGCTTTCCGCCCTGATGGCGGCGGTGGCGGCGTTTTCGTCCGTCAT
CGTGGTTTCCTGGCCTTATCTTTTTCGCGACAATCTCGCCCGTCGCATGGCGAAGGTGGAGAATGAGCGGGAGCTCCTTC
GCAAGCAGGAGCGGGCGCGACTTGCCATGCAAAAGCGCCTTCCTTCGCTCCGCAGCGAACCGCGAAAACTCTTCAAGCAG
ATCGTCGATCGTTTCAAACTCGCAAAGCAGGGCGATAACGGACAGCTTGTGGACCGTCTCCGCAGGGCAGGCTATCGCGG
CAATGCGCCGGTCATCACTTTCCTTGCGGTGCGGCTCATCGCACCGATCGCGATCTTTGCCGTCAGCCTCACTTATGTTC
TTCTCATCCTCAAGCCCGACCTGCCTCTTTTCGCGATCCTCGGCATCGCTGCCGCCCTGGGGGGCTTCGGCTATTTCGTG
CCGGCCCTTTATATCCGGAACAAGATCACCAAGCGGCAGAAGGCCATCCAGCGCGCCTGGCCGGAGGCGCTCGACCTTCT
GCTTATCTGCGTCGAATCCGGGATGAGCATCGAAAGCGCCTTCCGCAAGGTGGCCGAGGAGATCGGCACACAATCCGCCG
AGATAGCGGAGGAAATTGCGCTGACGACGGCGGAGCTGTCCTTTCTTCAGGACCGGCGGCAGGCCTATGAAAATCTGGGC
CGGCGGACCGGCGTGGAGGGTGTGCGCGCAGCCGTCACCAGCCTCATCCAGGCGGAGAAATACGGCACGCCACTTGGCCA
GGCGCTGCGCGTCATGGCGCAGGAGAACCGCGACATGCGCATGAGCGAGGCTGAAAAGCGCGCCGCCGCGCTACCCCCGA
AGCTCACCGTACCGATGATCGTGTTCTTTCTGCCCGTTCTCTTCGCCGTCATCATCACGCCGGCAGCGATCCAGATCGCG
GGAATTCAATAA

Upstream 100 bases:

>100_bases
ACCCTCACGGGAAAGCTCGTGCTCGCAGGCTGCGCACTCTGGATGGGCATGGGCATCCTCGTCATGCGCAAGATGATCAA
TTTCGATTTTTGAGGGCGAT

Downstream 100 bases:

>100_bases
TGCCATTCAGGACTTCGAAGCCCCTGCCAGCCGGGCGATCTCGCCCGCGATCTGTTCCAGGGGAAGAACGAGGTCGACGA
GCCCTGAATCGATAGCTGCC

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Pilus Assembly Protein; Integral Membrane Protein; TadC Family Type II/IV Secretion System Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Von Willebrand Factor Type A; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSLASYIPEPGQLSALMAAVAAFSSVIVVSWPYLFRDNLARRMAKVENERELLRKQERARLAMQKRLPSLRSEPRKLFKQ
IVDRFKLAKQGDNGQLVDRLRRAGYRGNAPVITFLAVRLIAPIAIFAVSLTYVLLILKPDLPLFAILGIAAALGGFGYFV
PALYIRNKITKRQKAIQRAWPEALDLLLICVESGMSIESAFRKVAEEIGTQSAEIAEEIALTTAELSFLQDRRQAYENLG
RRTGVEGVRAAVTSLIQAEKYGTPLGQALRVMAQENRDMRMSEAEKRAAALPPKLTVPMIVFFLPVLFAVIITPAAIQIA
GIQ

Sequences:

>Translated_323_residues
MSLASYIPEPGQLSALMAAVAAFSSVIVVSWPYLFRDNLARRMAKVENERELLRKQERARLAMQKRLPSLRSEPRKLFKQ
IVDRFKLAKQGDNGQLVDRLRRAGYRGNAPVITFLAVRLIAPIAIFAVSLTYVLLILKPDLPLFAILGIAAALGGFGYFV
PALYIRNKITKRQKAIQRAWPEALDLLLICVESGMSIESAFRKVAEEIGTQSAEIAEEIALTTAELSFLQDRRQAYENLG
RRTGVEGVRAAVTSLIQAEKYGTPLGQALRVMAQENRDMRMSEAEKRAAALPPKLTVPMIVFFLPVLFAVIITPAAIQIA
GIQ
>Mature_322_residues
SLASYIPEPGQLSALMAAVAAFSSVIVVSWPYLFRDNLARRMAKVENERELLRKQERARLAMQKRLPSLRSEPRKLFKQI
VDRFKLAKQGDNGQLVDRLRRAGYRGNAPVITFLAVRLIAPIAIFAVSLTYVLLILKPDLPLFAILGIAAALGGFGYFVP
ALYIRNKITKRQKAIQRAWPEALDLLLICVESGMSIESAFRKVAEEIGTQSAEIAEEIALTTAELSFLQDRRQAYENLGR
RTGVEGVRAAVTSLIQAEKYGTPLGQALRVMAQENRDMRMSEAEKRAAALPPKLTVPMIVFFLPVLFAVIITPAAIQIAG
IQ

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35835; Mature: 35704

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLASYIPEPGQLSALMAAVAAFSSVIVVSWPYLFRDNLARRMAKVENERELLRKQERAR
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAMQKRLPSLRSEPRKLFKQIVDRFKLAKQGDNGQLVDRLRRAGYRGNAPVITFLAVRLI
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
APIAIFAVSLTYVLLILKPDLPLFAILGIAAALGGFGYFVPALYIRNKITKRQKAIQRAW
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PEALDLLLICVESGMSIESAFRKVAEEIGTQSAEIAEEIALTTAELSFLQDRRQAYENLG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRTGVEGVRAAVTSLIQAEKYGTPLGQALRVMAQENRDMRMSEAEKRAAALPPKLTVPMI
HHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHH
VFFLPVLFAVIITPAAIQIAGIQ
HHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure 
SLASYIPEPGQLSALMAAVAAFSSVIVVSWPYLFRDNLARRMAKVENERELLRKQERAR
CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA