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The map label for this gene is glxA [H]

Identifier: 110632947

GI number: 110632947

Start: 660114

End: 661157

Strand: Reverse

Name: glxA [H]

Synonym: Meso_0590

Alternate gene names: 110632947

Gene position: 661157-660114 (Counterclockwise)

Preceding gene: 110632959

Following gene: 110632946

Centisome position: 14.98

GC content: 62.84

Gene sequence:

>1044_bases
ATGCAGCGATACGATGAAAATCCGCAGCCCGGTAGCCGCCCACGCTTGCGCATCGGCTTTGTCCTAGCGCGCCGGTTCAC
GCTATCGGCCTTCGCCAATTTTGTTGATGTGTTGCGGCTGGCCGCGGACGAAGGGGACCGTTCTCGCCCAATCCACTGCA
GCTGGAAAGTGCTCTCGGCCACCATGAGCCCGGTCGCCTCGAGCTGCGGCATCGCCGTCACACCGGACGAGCACCTGGGC
GATCCGACGCGATTTGACTACATCGTCGTCGTGGGCGGATTGATCAAGGAGATCGAAAATCTCGACCCGGAATACATCGT
TTTCCTGCGCCGCGCGGCGGAGGCAGGCGTGCCCCTCGTGGGGGTGTGCACCGGCGCCTTCATCCTCCACCGCGCCGGAC
TAATGCAGGGCTACCGGTGTTGCGTGAGCTGGTTCCACCACCATGATTTTCTAGAACAGTTCGATGGGCTGGTCCCGGTT
TCCGACCAGATCTTCGTGGTGGACCGTGAGCGGCTAACCTGTTCGGGCGGTGCCAGCTCCGCCCACCTGGCGGCTTTCCT
GGTGGATCGGCACATCGGCCGCTCGGCCGCGCGCAAGAGCCTGCACATAATGATCATCGACGAGGCGATGGCGGCCGAGG
ATCCCCAGCCTGGCCTGCCGCTGGAACTGAAGACGCAGGATGTTCTGGTGCGCAAGGCGTTGTCACACCTGCAGCAAAAC
CTCGATAACCCGCCGACGATTTCGACTGTCGCCGCGCGCCTCGGCGTCAGTCGCCGCAAGCTCGAGCGCCATTTCAACAA
TGCGCTCGGGCTGACCCCGAGCGAGGCGTTTCTGCGGGTAAGATTAACACAGGCCCGCTTCCTGCTCGGCAGATCAAGCA
GGTCCGTGACGGACATCGCGGCCGCGACCGGATTTTGCGATCTGTCGCATCTGATCCAGGTATTCCGGCAACGCGAAGGG
GTAACGCCGGAAGCGTGGCGCCGTCAGATACGCAAGCAGCCGCAGCCCGATTTGACAGAGGCAGATATGCTCTTTCCGGC
CTAG

Upstream 100 bases:

>100_bases
TGGCGCCTTCCTTGCGGCAGAAACTGCCGTGCTTGCACCCTATGCAAAAGAGCGCGCGGAAGACTGGATCATTGCGTCAA
ACTGGCGTTATTATTGCGCC

Downstream 100 bases:

>100_bases
CCAATCGCTCCGATAGTCTAGTTGCTGACCACGCCTTTGTGGATGTGAGCATATATCCGGCTGGAGAGTGGATGGGACCA
CGATGCCGCCGTTGGAATTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MQRYDENPQPGSRPRLRIGFVLARRFTLSAFANFVDVLRLAADEGDRSRPIHCSWKVLSATMSPVASSCGIAVTPDEHLG
DPTRFDYIVVVGGLIKEIENLDPEYIVFLRRAAEAGVPLVGVCTGAFILHRAGLMQGYRCCVSWFHHHDFLEQFDGLVPV
SDQIFVVDRERLTCSGGASSAHLAAFLVDRHIGRSAARKSLHIMIIDEAMAAEDPQPGLPLELKTQDVLVRKALSHLQQN
LDNPPTISTVAARLGVSRRKLERHFNNALGLTPSEAFLRVRLTQARFLLGRSSRSVTDIAAATGFCDLSHLIQVFRQREG
VTPEAWRRQIRKQPQPDLTEADMLFPA

Sequences:

>Translated_347_residues
MQRYDENPQPGSRPRLRIGFVLARRFTLSAFANFVDVLRLAADEGDRSRPIHCSWKVLSATMSPVASSCGIAVTPDEHLG
DPTRFDYIVVVGGLIKEIENLDPEYIVFLRRAAEAGVPLVGVCTGAFILHRAGLMQGYRCCVSWFHHHDFLEQFDGLVPV
SDQIFVVDRERLTCSGGASSAHLAAFLVDRHIGRSAARKSLHIMIIDEAMAAEDPQPGLPLELKTQDVLVRKALSHLQQN
LDNPPTISTVAARLGVSRRKLERHFNNALGLTPSEAFLRVRLTQARFLLGRSSRSVTDIAAATGFCDLSHLIQVFRQREG
VTPEAWRRQIRKQPQPDLTEADMLFPA
>Mature_347_residues
MQRYDENPQPGSRPRLRIGFVLARRFTLSAFANFVDVLRLAADEGDRSRPIHCSWKVLSATMSPVASSCGIAVTPDEHLG
DPTRFDYIVVVGGLIKEIENLDPEYIVFLRRAAEAGVPLVGVCTGAFILHRAGLMQGYRCCVSWFHHHDFLEQFDGLVPV
SDQIFVVDRERLTCSGGASSAHLAAFLVDRHIGRSAARKSLHIMIIDEAMAAEDPQPGLPLELKTQDVLVRKALSHLQQN
LDNPPTISTVAARLGVSRRKLERHFNNALGLTPSEAFLRVRLTQARFLLGRSSRSVTDIAAATGFCDLSHLIQVFRQREG
VTPEAWRRQIRKQPQPDLTEADMLFPA

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38608; Mature: 38608

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRYDENPQPGSRPRLRIGFVLARRFTLSAFANFVDVLRLAADEGDRSRPIHCSWKVLSA
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHH
TMSPVASSCGIAVTPDEHLGDPTRFDYIVVVGGLIKEIENLDPEYIVFLRRAAEAGVPLV
HHHHHHHHCCEEECCHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEE
GVCTGAFILHRAGLMQGYRCCVSWFHHHDFLEQFDGLVPVSDQIFVVDRERLTCSGGASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCCH
AHLAAFLVDRHIGRSAARKSLHIMIIDEAMAAEDPQPGLPLELKTQDVLVRKALSHLQQN
HHHHHHHHHHHHCHHHHHCCEEEEEEEHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHH
LDNPPTISTVAARLGVSRRKLERHFNNALGLTPSEAFLRVRLTQARFLLGRSSRSVTDIA
CCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
AATGFCDLSHLIQVFRQREGVTPEAWRRQIRKQPQPDLTEADMLFPA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRYDENPQPGSRPRLRIGFVLARRFTLSAFANFVDVLRLAADEGDRSRPIHCSWKVLSA
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHH
TMSPVASSCGIAVTPDEHLGDPTRFDYIVVVGGLIKEIENLDPEYIVFLRRAAEAGVPLV
HHHHHHHHCCEEECCHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEE
GVCTGAFILHRAGLMQGYRCCVSWFHHHDFLEQFDGLVPVSDQIFVVDRERLTCSGGASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCCH
AHLAAFLVDRHIGRSAARKSLHIMIIDEAMAAEDPQPGLPLELKTQDVLVRKALSHLQQN
HHHHHHHHHHHHCHHHHHCCEEEEEEEHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHH
LDNPPTISTVAARLGVSRRKLERHFNNALGLTPSEAFLRVRLTQARFLLGRSSRSVTDIA
CCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
AATGFCDLSHLIQVFRQREGVTPEAWRRQIRKQPQPDLTEADMLFPA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]