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The map label for this gene is glxA [H]

Identifier: 110632931

GI number: 110632931

Start: 632995

End: 634023

Strand: Reverse

Name: glxA [H]

Synonym: Meso_0573

Alternate gene names: 110632931

Gene position: 634023-632995 (Counterclockwise)

Preceding gene: 110632936

Following gene: 110632929

Centisome position: 14.37

GC content: 59.57

Gene sequence:

>1029_bases
TTGCTGAACCGAGAGTTTTCTGCCGTGCCAGGTCCGATCTCCCCGATCGACGTTCTTTTTCTAGCTTATCCTGGCGTCTC
CATGCTTGATCTCATCGGGCCGATGGAGGCACTCCAAGGAGTGGCGCTGCACCAGTCCAATCCGGCGGGATACCGGTGCA
CTGTCGCTTCTATGACAGGCGGTCCTGTTCAGACATTCAACGGCCTCAGCATCGACACTGTAGAGGTGGGTGCGTTGAAA
ACGCCCTACCGCACCGTTGTTGTCCCAGGCGCTATTCAGCCCGATCTGATTATCGGCAACACGGCCTTGGTTGAATGGCT
GCGAGAAAACGCCGGCAGAGCGGATCGGGTGTGTTCGATCTGCGCGGGCAGCTTCATACTGGCCGAAGCCGGGCTCCTGC
GTGGCCGCCGTGCAACCACGCACTGGTTTCATTGTGATCGTTTGAGCAGGGATTACGAAGACATCACCGTCGACGCCGAC
GCAATCTTCGTGCGAGACGGACGCGTTTGGACTTCGGCAGGAGTCACCACCGGCATCGACCTCGCGCTCGCGCTCATAGA
GGAGGATTTCGGGCGCGACCTGGCAATGTTCGTAGCGCGGTTGCTGGTCGTCTATCTTCGACGCACTGGCGGGCAGTCTC
AATTCAGCGCCATGCTTGCCGCCCAAACCTCTTGCTCAACCGACCGGTTCGCTGACCTTGAGCGCTGGATGCTGGAGAAC
CCGACTGAGGATCTCCGCGTTGAGCGGCTTGCCGCGCGCGCTGGCATGAGCCCGCGCAACTTTGCGCGGCGATATAGTGA
TATGCGAAAGGCAACGCCCGCTCGTGCCGTCGAGGCAATTCGCGTCGAGGCGGCTCGCCGCATTCTGGAAGAACACGATT
TGAGGCTGATCGAGGTCGCAAACCGCTGTGGCTTCAGTGATGAGGCACATCTACGCAAGGCTTTTCATCGGCAGTTAGGC
ATTTCGCCCAACGATTATCGCCAGCGCTTTGCAATTGGCGAGAGAACGCTGGCTGGCGTCCAGCAGTGA

Upstream 100 bases:

>100_bases
CGCGAGAATGACATAGGAGATGCACTTTTCTGCCAAAGGCTGAAAGTCGGCGGTGAGAGCTTGACAGGCAGTTCGCGCAA
AATAAGGATTGGCCAGAAAG

Downstream 100 bases:

>100_bases
GCCCGAGCCTCTAACGGTAAGCCATATGTCAGCGTCAAGGCCCCGCGTCGCAGAATGGAATGCCGGGGCGCGAACGTCCC
GGCATGAATTGCTAGTGAGT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLNREFSAVPGPISPIDVLFLAYPGVSMLDLIGPMEALQGVALHQSNPAGYRCTVASMTGGPVQTFNGLSIDTVEVGALK
TPYRTVVVPGAIQPDLIIGNTALVEWLRENAGRADRVCSICAGSFILAEAGLLRGRRATTHWFHCDRLSRDYEDITVDAD
AIFVRDGRVWTSAGVTTGIDLALALIEEDFGRDLAMFVARLLVVYLRRTGGQSQFSAMLAAQTSCSTDRFADLERWMLEN
PTEDLRVERLAARAGMSPRNFARRYSDMRKATPARAVEAIRVEAARRILEEHDLRLIEVANRCGFSDEAHLRKAFHRQLG
ISPNDYRQRFAIGERTLAGVQQ

Sequences:

>Translated_342_residues
MLNREFSAVPGPISPIDVLFLAYPGVSMLDLIGPMEALQGVALHQSNPAGYRCTVASMTGGPVQTFNGLSIDTVEVGALK
TPYRTVVVPGAIQPDLIIGNTALVEWLRENAGRADRVCSICAGSFILAEAGLLRGRRATTHWFHCDRLSRDYEDITVDAD
AIFVRDGRVWTSAGVTTGIDLALALIEEDFGRDLAMFVARLLVVYLRRTGGQSQFSAMLAAQTSCSTDRFADLERWMLEN
PTEDLRVERLAARAGMSPRNFARRYSDMRKATPARAVEAIRVEAARRILEEHDLRLIEVANRCGFSDEAHLRKAFHRQLG
ISPNDYRQRFAIGERTLAGVQQ
>Mature_342_residues
MLNREFSAVPGPISPIDVLFLAYPGVSMLDLIGPMEALQGVALHQSNPAGYRCTVASMTGGPVQTFNGLSIDTVEVGALK
TPYRTVVVPGAIQPDLIIGNTALVEWLRENAGRADRVCSICAGSFILAEAGLLRGRRATTHWFHCDRLSRDYEDITVDAD
AIFVRDGRVWTSAGVTTGIDLALALIEEDFGRDLAMFVARLLVVYLRRTGGQSQFSAMLAAQTSCSTDRFADLERWMLEN
PTEDLRVERLAARAGMSPRNFARRYSDMRKATPARAVEAIRVEAARRILEEHDLRLIEVANRCGFSDEAHLRKAFHRQLG
ISPNDYRQRFAIGERTLAGVQQ

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786496, Length=101, Percent_Identity=31.6831683168317, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37796; Mature: 37796

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNREFSAVPGPISPIDVLFLAYPGVSMLDLIGPMEALQGVALHQSNPAGYRCTVASMTG
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCC
GPVQTFNGLSIDTVEVGALKTPYRTVVVPGAIQPDLIIGNTALVEWLRENAGRADRVCSI
CCCCCCCCCEECEEECCCCCCCCEEEEECCCCCCCEEECCHHHHHHHHHCCCCHHHHHHH
CAGSFILAEAGLLRGRRATTHWFHCDRLSRDYEDITVDADAIFVRDGRVWTSAGVTTGID
HHHHHHHHHHHHHCCCCCCCHHEEHHHHCCCCHHEEECCCEEEEECCEEEECCCCCHHHH
LALALIEEDFGRDLAMFVARLLVVYLRRTGGQSQFSAMLAAQTSCSTDRFADLERWMLEN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PTEDLRVERLAARAGMSPRNFARRYSDMRKATPARAVEAIRVEAARRILEEHDLRLIEVA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
NRCGFSDEAHLRKAFHRQLGISPNDYRQRFAIGERTLAGVQQ
HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLNREFSAVPGPISPIDVLFLAYPGVSMLDLIGPMEALQGVALHQSNPAGYRCTVASMTG
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCC
GPVQTFNGLSIDTVEVGALKTPYRTVVVPGAIQPDLIIGNTALVEWLRENAGRADRVCSI
CCCCCCCCCEECEEECCCCCCCCEEEEECCCCCCCEEECCHHHHHHHHHCCCCHHHHHHH
CAGSFILAEAGLLRGRRATTHWFHCDRLSRDYEDITVDADAIFVRDGRVWTSAGVTTGID
HHHHHHHHHHHHHCCCCCCCHHEEHHHHCCCCHHEEECCCEEEEECCEEEECCCCCHHHH
LALALIEEDFGRDLAMFVARLLVVYLRRTGGQSQFSAMLAAQTSCSTDRFADLERWMLEN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PTEDLRVERLAARAGMSPRNFARRYSDMRKATPARAVEAIRVEAARRILEEHDLRLIEVA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
NRCGFSDEAHLRKAFHRQLGISPNDYRQRFAIGERTLAGVQQ
HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]