| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632929
Identifier: 110632929
GI number: 110632929
Start: 629912
End: 630511
Strand: Reverse
Name: 110632929
Synonym: Meso_0570
Alternate gene names: NA
Gene position: 630511-629912 (Counterclockwise)
Preceding gene: 110632931
Following gene: 110632928
Centisome position: 14.29
GC content: 59.33
Gene sequence:
>600_bases ATGCCAGTTCGATCCCGCTTATCAGATCACCGTGCCGAAAGAGCTGGGCGAGGCACGCTGATGGCTTTTGCTGATGCCTA CCGCAACCAGGTCGCACTCCTGATCCGCACGCTACCTTCCGTCGCAGCGGAAGAGTGTTTCGCGATGAAGGGCGGCACGG CTATCAATCACTTTATCCGCGACCTGCCTCGGCTCTCGGTGGATATCGACCTCACCTATCTGCCTGTTCAGGATCGTGCG ACCTCGCTAACCGCGATCGATGTGGCGATGCTGCGCATCGCCGAGCGCATCACTAAAGTCGTCCGTGGCGTCCACGTCGC ACCTTCGCGCTCGCGTGAGAATGTCGTCACCAAGCTCGTAGTCCGGAGCGACGGTGCGCTGATCAAGATCGAGGTCACGC CGGTCCTGCGGGGCTGCGTGTTCGAGCCGGGGATGCGTCCAGTCTCATCCAGTGTCGAAGACGAGTTCGGCTTTGCGGAA ATGCGGATCGTCTCCTTCGCCGATCTCTATGCTGGGAAGATTGTGCCGCACTCGACCGGCAGCATCCACGCGATCTCTTC GACGATCGTATTGTTTACTAGTAATTTGCGCGACACGTAG
Upstream 100 bases:
>100_bases GGCAGGCACTTCTGCCGGGCGCTTGTGAGGCCATAAAATACCCGTCATCCACCGATGGTCAAGCGTCAGCCGACCGATAC AAATCCTCGACTGCAGGGCT
Downstream 100 bases:
>100_bases GGAACTGGCGTAGAAACACCACCTAATCCTGTGCGAGTCTAAAACCGGCTGGATTTTCGACCTCAGACGTCTAGACTCGC AGGAAATACGCCATGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MPVRSRLSDHRAERAGRGTLMAFADAYRNQVALLIRTLPSVAAEECFAMKGGTAINHFIRDLPRLSVDIDLTYLPVQDRA TSLTAIDVAMLRIAERITKVVRGVHVAPSRSRENVVTKLVVRSDGALIKIEVTPVLRGCVFEPGMRPVSSSVEDEFGFAE MRIVSFADLYAGKIVPHSTGSIHAISSTIVLFTSNLRDT
Sequences:
>Translated_199_residues MPVRSRLSDHRAERAGRGTLMAFADAYRNQVALLIRTLPSVAAEECFAMKGGTAINHFIRDLPRLSVDIDLTYLPVQDRA TSLTAIDVAMLRIAERITKVVRGVHVAPSRSRENVVTKLVVRSDGALIKIEVTPVLRGCVFEPGMRPVSSSVEDEFGFAE MRIVSFADLYAGKIVPHSTGSIHAISSTIVLFTSNLRDT >Mature_198_residues PVRSRLSDHRAERAGRGTLMAFADAYRNQVALLIRTLPSVAAEECFAMKGGTAINHFIRDLPRLSVDIDLTYLPVQDRAT SLTAIDVAMLRIAERITKVVRGVHVAPSRSRENVVTKLVVRSDGALIKIEVTPVLRGCVFEPGMRPVSSSVEDEFGFAEM RIVSFADLYAGKIVPHSTGSIHAISSTIVLFTSNLRDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21806; Mature: 21674
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRSRLSDHRAERAGRGTLMAFADAYRNQVALLIRTLPSVAAEECFAMKGGTAINHFIR CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DLPRLSVDIDLTYLPVQDRATSLTAIDVAMLRIAERITKVVRGVHVAPSRSRENVVTKLV HCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEE VRSDGALIKIEVTPVLRGCVFEPGMRPVSSSVEDEFGFAEMRIVSFADLYAGKIVPHSTG EECCCCEEEEEECHHHHHHHCCCCCCCHHCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCC SIHAISSTIVLFTSNLRDT CEEEHHHEEEEEECCCCCC >Mature Secondary Structure PVRSRLSDHRAERAGRGTLMAFADAYRNQVALLIRTLPSVAAEECFAMKGGTAINHFIR CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DLPRLSVDIDLTYLPVQDRATSLTAIDVAMLRIAERITKVVRGVHVAPSRSRENVVTKLV HCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEE VRSDGALIKIEVTPVLRGCVFEPGMRPVSSSVEDEFGFAEMRIVSFADLYAGKIVPHSTG EECCCCEEEEEECHHHHHHHCCCCCCCHHCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCC SIHAISSTIVLFTSNLRDT CEEEHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA