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The map label for this gene is 110632879

Identifier: 110632879

GI number: 110632879

Start: 574843

End: 575388

Strand: Reverse

Name: 110632879

Synonym: Meso_0519

Alternate gene names: NA

Gene position: 575388-574843 (Counterclockwise)

Preceding gene: 110632880

Following gene: 110632878

Centisome position: 13.04

GC content: 68.5

Gene sequence:

>546_bases
ATGACGCGCGCCGGCTACCTGCTGACGGCCACTGGCGCCGCGCTCCTGCTGATCACGCTGGCGATGGTGCACGTTGCACC
GCGGCTCGTCTGGAACGCATCGGCCAGCGTCCCGGTCGGCCTCTATGAGATCGGCTCGGCTACGCCGCTCGAGGTCACCG
ACCTTGTCGCGGTCAATGCGCCGGAGCCGCTTGCCGCATTCCTCGCGGACCGGGGTTATCTGCCGCGCGGCGTACCGCTC
TTGAAGCGCGTTGCCGCACTTCCCGGGCAGACAGTCTGCCGTTCGGAAGGGGACATTAGCGTCGACGGGATCACCGTCGG
CAATGCGCTCGACCGCGACCGTCTGGGACGCACGCTGCCTATCTGGAGAGGCTGCCACCGGATCGGCGCGAGCGAACTCT
TCCTCATGAACATCGGCGTCCGGGACAGCCTGGACGGCCGCTACTTCGGGCCTCTCGCCGTCACCACCGTGATCGGCCGG
GCCACGCCTCTCTACACCGACGAAGACGGCGATGGTCGCTTCGTCTGGCGCGCGCCGACGCGGTGA

Upstream 100 bases:

>100_bases
ATTGGCGCCATGTCCATAACCGGCTCGCCGCCGGGGACGCCCCGCGATCCTACTCCCGACAGCAGCATCGCGCTTGGCAC
TTGCGACAGAGGGCCGAGCC

Downstream 100 bases:

>100_bases
CGGCGCAGCCATGACCCGTTCCACCGCATCGCCAAGGAGGTTGCCATGAGCCTGATCGGAGAATTCACCCGCACCAAGAG
CGGCTATGGCGGCCGCATTC

Product: TraF peptidase

Products: NA

Alternate protein names: Conjugal Transfer Protein TraF; TraF Peptidase; Conjugal Transfer TRAF Transmembrane Protein; Type IV Secretory Pathway Protease TraF-Like Protein; Peptidase; Plasmid Transfer Protein TraF; Type IV Secretory Pathway Protease TraF; Conjugative Transfer Signal Peptidase TraF; Peptidase S; Raf Peptidase. Serine Peptidase. Merops Family; Conjugal Transfer Protein Traf; Conjugal Transfer TraF Transmembrane Protein; Plasmid Transfer Protein Traf; Traf Peptidase Serine Peptidase Merops Family; Transmembrane Anchor Conjugal Transfer Protein; RaF Peptidase. Serine Peptidase. MEROPS Family; TraF Peptidase Serine Peptidase MEROPS Family

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTRAGYLLTATGAALLLITLAMVHVAPRLVWNASASVPVGLYEIGSATPLEVTDLVAVNAPEPLAAFLADRGYLPRGVPL
LKRVAALPGQTVCRSEGDISVDGITVGNALDRDRLGRTLPIWRGCHRIGASELFLMNIGVRDSLDGRYFGPLAVTTVIGR
ATPLYTDEDGDGRFVWRAPTR

Sequences:

>Translated_181_residues
MTRAGYLLTATGAALLLITLAMVHVAPRLVWNASASVPVGLYEIGSATPLEVTDLVAVNAPEPLAAFLADRGYLPRGVPL
LKRVAALPGQTVCRSEGDISVDGITVGNALDRDRLGRTLPIWRGCHRIGASELFLMNIGVRDSLDGRYFGPLAVTTVIGR
ATPLYTDEDGDGRFVWRAPTR
>Mature_180_residues
TRAGYLLTATGAALLLITLAMVHVAPRLVWNASASVPVGLYEIGSATPLEVTDLVAVNAPEPLAAFLADRGYLPRGVPLL
KRVAALPGQTVCRSEGDISVDGITVGNALDRDRLGRTLPIWRGCHRIGASELFLMNIGVRDSLDGRYFGPLAVTTVIGRA
TPLYTDEDGDGRFVWRAPTR

Specific function: Unknown

COG id: COG4959

COG function: function code OU; Type IV secretory pathway, protease TraF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19338; Mature: 19206

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAGYLLTATGAALLLITLAMVHVAPRLVWNASASVPVGLYEIGSATPLEVTDLVAVNA
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCEEEEEEEECC
PEPLAAFLADRGYLPRGVPLLKRVAALPGQTVCRSEGDISVDGITVGNALDRDRLGRTLP
CCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEECCCCCEEECCEEECCCCCHHHCCCCCC
IWRGCHRIGASELFLMNIGVRDSLDGRYFGPLAVTTVIGRATPLYTDEDGDGRFVWRAPT
HHHHHHHCCCCEEEEEECCCCCCCCCCEECHHHHHHHHHCCCCCEECCCCCCEEEEECCC
R
C
>Mature Secondary Structure 
TRAGYLLTATGAALLLITLAMVHVAPRLVWNASASVPVGLYEIGSATPLEVTDLVAVNA
CCCCEEEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCCEEEEEEEECC
PEPLAAFLADRGYLPRGVPLLKRVAALPGQTVCRSEGDISVDGITVGNALDRDRLGRTLP
CCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEECCCCCEEECCEEECCCCCHHHCCCCCC
IWRGCHRIGASELFLMNIGVRDSLDGRYFGPLAVTTVIGRATPLYTDEDGDGRFVWRAPT
HHHHHHHCCCCEEEEEECCCCCCCCCCEECHHHHHHHHHCCCCCEECCCCCCEEEEECCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA