| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is catD [H]
Identifier: 110632807
GI number: 110632807
Start: 492597
End: 493391
Strand: Reverse
Name: catD [H]
Synonym: Meso_0446
Alternate gene names: 110632807
Gene position: 493391-492597 (Counterclockwise)
Preceding gene: 110632813
Following gene: 110632806
Centisome position: 11.18
GC content: 61.26
Gene sequence:
>795_bases ATGGCATTTGCGCGCGTGAACGGAGTCGTCCTGCATCACAGGATGCGCGGACCTGAAGGTCGGCCTGTCCTTGCCTTCTC TAATTCGCTCGGCACGGATTTCCGGATCTGGGACGATGTGGCAGCGCTGCTTGAAGGCCAGTACCGCCTGGTTCTCTATG ACAAGCGCGGACACGGCCTCTCCGAGGCAACGCCGCAGCCTTATGCGATGACCGACCATGTGCGTGACCTAGCCGCTCTG CTCGATCATCTCGGAATCCGAGAGGCCACGATTGTGGGGCTGTCGGTAGGGGGAATGATCGCCCAAGGCCTCGCCGCGCT TCGGCCCGACCTGATACGTGCCCTGGTGCTGTGCGATACCGCCCATAAGGTCGGCACTGAAGAACTCTGGAGCGCACGCA TCAAAACAGCGAATGAAAGCGGCATCGCGCCAATGGCGGAGGGCATCATGCAGCGCTGGTTCGCCCCGGCCTTCCGCACA CCGGAGAACCCCGATTATGTCGGCTATCTCGCCATGCTGACGCGGCAGAGCCCTGAAGGATATGCGGGCACATGCGCGGC ACTGCGCGATGCGGATCTGACGGAATCAACGCGCGCGCTGAAGGTGCCGGCACTCTGCGTCGTCGGCGACCAGGACGGAT CGACCCCGCCCGATCTGGTTCGTGAGCTGGCCGGCCTCATCGAAGGGTCACGTTTTGAAATCATCGAGAATGCTGGGCAT CTGCCCTGCATCGAACAGCCGGAAAAGATCGCGGAGCTTATCCGTTCTTTCGCGAAAGATATTGGAATTGGCTGA
Upstream 100 bases:
>100_bases ACGGCACCAGCGCAGATGTAAGCCGGCGCGAATTTGCCTAACATTGACGTGGGCGCGGCTTTTCCCGTAGACACCACACC GAAATCCTGAGGTATCGCAC
Downstream 100 bases:
>100_bases GCAGCTCACGGGCCGAAAGACATCAAAAGGGAAAACAATGGAAATCCGCAGTGTCAATGAAGATTTTGCCGTCGCAGGCC AGATCGCACCGGGAAATGTC
Product: 3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAFARVNGVVLHHRMRGPEGRPVLAFSNSLGTDFRIWDDVAALLEGQYRLVLYDKRGHGLSEATPQPYAMTDHVRDLAAL LDHLGIREATIVGLSVGGMIAQGLAALRPDLIRALVLCDTAHKVGTEELWSARIKTANESGIAPMAEGIMQRWFAPAFRT PENPDYVGYLAMLTRQSPEGYAGTCAALRDADLTESTRALKVPALCVVGDQDGSTPPDLVRELAGLIEGSRFEIIENAGH LPCIEQPEKIAELIRSFAKDIGIG
Sequences:
>Translated_264_residues MAFARVNGVVLHHRMRGPEGRPVLAFSNSLGTDFRIWDDVAALLEGQYRLVLYDKRGHGLSEATPQPYAMTDHVRDLAAL LDHLGIREATIVGLSVGGMIAQGLAALRPDLIRALVLCDTAHKVGTEELWSARIKTANESGIAPMAEGIMQRWFAPAFRT PENPDYVGYLAMLTRQSPEGYAGTCAALRDADLTESTRALKVPALCVVGDQDGSTPPDLVRELAGLIEGSRFEIIENAGH LPCIEQPEKIAELIRSFAKDIGIG >Mature_263_residues AFARVNGVVLHHRMRGPEGRPVLAFSNSLGTDFRIWDDVAALLEGQYRLVLYDKRGHGLSEATPQPYAMTDHVRDLAALL DHLGIREATIVGLSVGGMIAQGLAALRPDLIRALVLCDTAHKVGTEELWSARIKTANESGIAPMAEGIMQRWFAPAFRTP ENPDYVGYLAMLTRQSPEGYAGTCAALRDADLTESTRALKVPALCVVGDQDGSTPPDLVRELAGLIEGSRFEIIENAGHL PCIEQPEKIAELIRSFAKDIGIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 28624; Mature: 28493
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFARVNGVVLHHRMRGPEGRPVLAFSNSLGTDFRIWDDVAALLEGQYRLVLYDKRGHGL CCCCHHCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCC SEATPQPYAMTDHVRDLAALLDHLGIREATIVGLSVGGMIAQGLAALRPDLIRALVLCDT CCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH AHKVGTEELWSARIKTANESGIAPMAEGIMQRWFAPAFRTPENPDYVGYLAMLTRQSPEG HHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC YAGTCAALRDADLTESTRALKVPALCVVGDQDGSTPPDLVRELAGLIEGSRFEIIENAGH CCHHHHHHHCCCCCCCCHHEECCEEEEEECCCCCCCHHHHHHHHHHHCCCHHEEECCCCC LPCIEQPEKIAELIRSFAKDIGIG CCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFARVNGVVLHHRMRGPEGRPVLAFSNSLGTDFRIWDDVAALLEGQYRLVLYDKRGHGL CCCHHCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCC SEATPQPYAMTDHVRDLAALLDHLGIREATIVGLSVGGMIAQGLAALRPDLIRALVLCDT CCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH AHKVGTEELWSARIKTANESGIAPMAEGIMQRWFAPAFRTPENPDYVGYLAMLTRQSPEG HHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC YAGTCAALRDADLTESTRALKVPALCVVGDQDGSTPPDLVRELAGLIEGSRFEIIENAGH CCHHHHHHHCCCCCCCCHHEECCEEEEEECCCCCCCHHHHHHHHHHHCCCHHEEECCCCC LPCIEQPEKIAELIRSFAKDIGIG CCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]