| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yjbB [H]
Identifier: 110632503
GI number: 110632503
Start: 175541
End: 177211
Strand: Reverse
Name: yjbB [H]
Synonym: Meso_0141
Alternate gene names: 110632503
Gene position: 177211-175541 (Counterclockwise)
Preceding gene: 110632504
Following gene: 110632500
Centisome position: 4.02
GC content: 61.46
Gene sequence:
>1671_bases ATGAGCGGATCCGTCTTCTTTCTGCATATGGCAGGCGCCGTCGCTCTGCTGCTTTGGGCAACGCACATGGTGCGCACCGG CGTGGAGCGGGCCTATGGGGATGTGCTGAAGCGACGGCTGCGCAGCACGCTCGGCAATCCCCTGCTTGCCACAGCCACGG GACTTGCCCTTGCGGTGGCGTTGCAAAGCTCCACCGCTGTCACCCTGCTCGTGGGCTCGTTTGCTGGTTCCGGTATCGTG ACCGGGCTCTCTGGCATTCTTGCCGTGCGTGGCGCCGAGGTTGGCTCCGCCCTGGTCGTCAAGATCCTGAGCTTCGATCT TAGATTGCTCGTCCCCATCTGCCTCGTTGCCGGCACGATGATCTTCATGGCCACGGAGCGGCGGGCGTGGCGGCAGGCTG GCCGCATTCTCATCGGCATTGGTCTTCTCGTGCTTTCCCTGGAGATGATGGGTGAGGCTTCACAGCCGCTGCGCGAAAGC CGAATCGCTCCGCTGATCGTCGGCTATCTTTCCAGCGATCCGATCGCCGCTTTCCTGCTTGCGGGAATCGTCACTTATCT CTTTCACTCCAGCATCGCCGCCGTGCTCCTGCTTGCCACCTTCGCCGCAAACGGCATCCTCTCGGCGGAACTCGGCATTG CGATGGTGCTGGGGGTAAATCTCGGCAGTTCATTCATCGCGCCGATGCTGACGCGCGCCTCGCCGCCTGAGGCTCGCGTG GTTCCGCTTGCCAATCTGCTCATGCGCGGCGCAGGCTCGGTGGTCGCGCTTGCCACCTTCCTGTTCTTCAAACCGTCTGC CGAGGTTTTGGGCAACAGCGCGGCAGACCAGATCGTGCATGCGCACATCGCCTTCAACTTGTTGATTCTGATTGCCGGCA TTCCGTTATCTGGCCTGGTGCTCAAGGCCACGGAAGCACTGGTTTCCCTCTCTCCCGGCCTTACGCCCGAGGAGAAGCAG GACGCGCTATTGAGCGAAGTCAGTGCCCTCGATGAAACCGCGCTCGACAATCCCCAGCAGGCGCTCGCCAATGTCACGCG CGAGGCGGTGCGCATGTGCGAAACGGTCGAATTCATGCTCAGCCGCGCGCTCGCGCTTTATGAAGACACGGACAAGCAGG CGATCACAGCTCTCGCCGATCTTGACGATACGCTCGACCGCCGCCATGCGGCGATCAAGCTTTACCTGGCCCGGATCAGC CGAGAGGACATGTCCGCGGAAGACACGCGCCGCTGCCAGGATCTCCTCGGCGCCTGCGTGAAACTGGAGCAAGTGGGGGA CATCATCGTGCGCAACCTGCTTGCACATGCCAGGCGCAAGATGGAGCGCAAGGTGGAATTCACGCCCGAAGGCTGGCTTG AGCTCTCAAACTTCCACGCCGCCGTGCTATCGAACGCGCGACTCGCCTTCAATCTCCTGGTGACAGGTGATCCGGAGACC GCCCGCCGCCTCGTAGCCGAGAAAGATCGAATGCGGGAGATCGAGAAGACACTCAGCCACCATCATTTCGAGCGCCTGCG CATGGGCTCGGAGCAAAGCGTCGAGACAAGCTCTATCCATCTCGACACAATCCGTGACCTGAAGCAGATCAATTCGCTGC TCGCCACGATTGCCTATCCTGTGCTGGAAGCGGAAGGGCTTTTGATGGAGACCCGCCTCAAATCAGCTTGA
Upstream 100 bases:
>100_bases AGCCGCGCAAGCTGCGGAGCCTTCCTTGCCGATCGGCGTTTAAGAGACGGCAAATCATTTCTGCCAGGATGTGGGCTTCC AGCAGCCGGGAACGTGGCAA
Downstream 100 bases:
>100_bases AGGCAAGACCGGACAGAAGCGCCTCCACATAGCGCTTCTTCTGGAAAAAGCCGTTCAGGGAAACGCGGTCGACGGCGGTG GGCCGGCGCAGAACATCCGG
Product: Na+/Pi-cotransporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MSGSVFFLHMAGAVALLLWATHMVRTGVERAYGDVLKRRLRSTLGNPLLATATGLALAVALQSSTAVTLLVGSFAGSGIV TGLSGILAVRGAEVGSALVVKILSFDLRLLVPICLVAGTMIFMATERRAWRQAGRILIGIGLLVLSLEMMGEASQPLRES RIAPLIVGYLSSDPIAAFLLAGIVTYLFHSSIAAVLLLATFAANGILSAELGIAMVLGVNLGSSFIAPMLTRASPPEARV VPLANLLMRGAGSVVALATFLFFKPSAEVLGNSAADQIVHAHIAFNLLILIAGIPLSGLVLKATEALVSLSPGLTPEEKQ DALLSEVSALDETALDNPQQALANVTREAVRMCETVEFMLSRALALYEDTDKQAITALADLDDTLDRRHAAIKLYLARIS REDMSAEDTRRCQDLLGACVKLEQVGDIIVRNLLAHARRKMERKVEFTPEGWLELSNFHAAVLSNARLAFNLLVTGDPET ARRLVAEKDRMREIEKTLSHHHFERLRMGSEQSVETSSIHLDTIRDLKQINSLLATIAYPVLEAEGLLMETRLKSA
Sequences:
>Translated_556_residues MSGSVFFLHMAGAVALLLWATHMVRTGVERAYGDVLKRRLRSTLGNPLLATATGLALAVALQSSTAVTLLVGSFAGSGIV TGLSGILAVRGAEVGSALVVKILSFDLRLLVPICLVAGTMIFMATERRAWRQAGRILIGIGLLVLSLEMMGEASQPLRES RIAPLIVGYLSSDPIAAFLLAGIVTYLFHSSIAAVLLLATFAANGILSAELGIAMVLGVNLGSSFIAPMLTRASPPEARV VPLANLLMRGAGSVVALATFLFFKPSAEVLGNSAADQIVHAHIAFNLLILIAGIPLSGLVLKATEALVSLSPGLTPEEKQ DALLSEVSALDETALDNPQQALANVTREAVRMCETVEFMLSRALALYEDTDKQAITALADLDDTLDRRHAAIKLYLARIS REDMSAEDTRRCQDLLGACVKLEQVGDIIVRNLLAHARRKMERKVEFTPEGWLELSNFHAAVLSNARLAFNLLVTGDPET ARRLVAEKDRMREIEKTLSHHHFERLRMGSEQSVETSSIHLDTIRDLKQINSLLATIAYPVLEAEGLLMETRLKSA >Mature_555_residues SGSVFFLHMAGAVALLLWATHMVRTGVERAYGDVLKRRLRSTLGNPLLATATGLALAVALQSSTAVTLLVGSFAGSGIVT GLSGILAVRGAEVGSALVVKILSFDLRLLVPICLVAGTMIFMATERRAWRQAGRILIGIGLLVLSLEMMGEASQPLRESR IAPLIVGYLSSDPIAAFLLAGIVTYLFHSSIAAVLLLATFAANGILSAELGIAMVLGVNLGSSFIAPMLTRASPPEARVV PLANLLMRGAGSVVALATFLFFKPSAEVLGNSAADQIVHAHIAFNLLILIAGIPLSGLVLKATEALVSLSPGLTPEEKQD ALLSEVSALDETALDNPQQALANVTREAVRMCETVEFMLSRALALYEDTDKQAITALADLDDTLDRRHAAIKLYLARISR EDMSAEDTRRCQDLLGACVKLEQVGDIIVRNLLAHARRKMERKVEFTPEGWLELSNFHAAVLSNARLAFNLLVTGDPETA RRLVAEKDRMREIEKTLSHHHFERLRMGSEQSVETSSIHLDTIRDLKQINSLLATIAYPVLEAEGLLMETRLKSA
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=540, Percent_Identity=33.8888888888889, Blast_Score=272, Evalue=4e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 59819; Mature: 59688
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSVFFLHMAGAVALLLWATHMVRTGVERAYGDVLKRRLRSTLGNPLLATATGLALAVA CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LQSSTAVTLLVGSFAGSGIVTGLSGILAVRGAEVGSALVVKILSFDLRLLVPICLVAGTM HCCCCEEEEEEHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IFMATERRAWRQAGRILIGIGLLVLSLEMMGEASQPLRESRIAPLIVGYLSSDPIAAFLL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHEEECCCCCHHHHHHH AGIVTYLFHSSIAAVLLLATFAANGILSAELGIAMVLGVNLGSSFIAPMLTRASPPEARV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCHH VPLANLLMRGAGSVVALATFLFFKPSAEVLGNSAADQIVHAHIAFNLLILIAGIPLSGLV HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH LKATEALVSLSPGLTPEEKQDALLSEVSALDETALDNPQQALANVTREAVRMCETVEFML HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH SRALALYEDTDKQAITALADLDDTLDRRHAAIKLYLARISREDMSAEDTRRCQDLLGACV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KLEQVGDIIVRNLLAHARRKMERKVEFTPEGWLELSNFHAAVLSNARLAFNLLVTGDPET HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCHHH ARRLVAEKDRMREIEKTLSHHHFERLRMGSEQSVETSSIHLDTIRDLKQINSLLATIAYP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VLEAEGLLMETRLKSA HHHHCCCHHHHHHCCC >Mature Secondary Structure SGSVFFLHMAGAVALLLWATHMVRTGVERAYGDVLKRRLRSTLGNPLLATATGLALAVA CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LQSSTAVTLLVGSFAGSGIVTGLSGILAVRGAEVGSALVVKILSFDLRLLVPICLVAGTM HCCCCEEEEEEHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IFMATERRAWRQAGRILIGIGLLVLSLEMMGEASQPLRESRIAPLIVGYLSSDPIAAFLL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHEEECCCCCHHHHHHH AGIVTYLFHSSIAAVLLLATFAANGILSAELGIAMVLGVNLGSSFIAPMLTRASPPEARV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCHH VPLANLLMRGAGSVVALATFLFFKPSAEVLGNSAADQIVHAHIAFNLLILIAGIPLSGLV HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH LKATEALVSLSPGLTPEEKQDALLSEVSALDETALDNPQQALANVTREAVRMCETVEFML HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH SRALALYEDTDKQAITALADLDDTLDRRHAAIKLYLARISREDMSAEDTRRCQDLLGACV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KLEQVGDIIVRNLLAHARRKMERKVEFTPEGWLELSNFHAAVLSNARLAFNLLVTGDPET HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCHHH ARRLVAEKDRMREIEKTLSHHHFERLRMGSEQSVETSSIHLDTIRDLKQINSLLATIAYP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VLEAEGLLMETRLKSA HHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]