| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is gsiB [H]
Identifier: 110632436
GI number: 110632436
Start: 99970
End: 101514
Strand: Direct
Name: gsiB [H]
Synonym: Meso_0074
Alternate gene names: 110632436
Gene position: 99970-101514 (Clockwise)
Preceding gene: 110632435
Following gene: 110632437
Centisome position: 2.27
GC content: 60.91
Gene sequence:
>1545_bases ATGTCGAGGCTTCACGCTCTCACGATGTCCCGCCGTGCTTTCCTCGCCGCCGCAGGCGCCGGAATCGCAGCCGTCCAGTT GCCCGGTTCGGCTTCCGCCCAGGCCGATGCCGGTGTTTTGCGCTACGCTCTCTCCGCCTTTCCGCCAAGCCTTAGCCCTT GGCTCAACGCCGGGGCAGCGGCATCCACGGTTAAGACGCTGATCATGCGCGGCCTGCTGGGTTACGATACCGAAGGACAG CTGATCGGCGAGATCGCTGAAAGCTGGGCTGCGGTGGATCCGACCACCTATGATTTCAAGCTCCGCGCCAATGCCGTTTT CAGCAATGGCAAACCCGTGCGGGCTCAGGACGTCATCTGGACCGTCAATCAGATCAGCGCTCCCGAATCGACCGCTCACC TCAGGACAACGCTCAACCAGGTGGAGTCCATGGAGGCGCTTGACGACCACACCGTGCGGTTGATCTTGACCAAGCCCAAT GCGGCATTGCCATTTGCCCTCGCCAGCCCGAACGCTGCCATTCTTGCCGAGGGCAGCACAGAGGATGCACCCATTGCCTG CGGCCCCTTCCGTCTGGCCCAGCAGGAGCGTGGTGTCTTCATCGAGGTCGAGCGCAATCCCGACTACTATAAGAACGGTT CGCCCCAGGTCGACAAAATCCGGCTCACGGCCTATGCCGATGAAAACCTTCGCATGGCTGCGCTGGAATCGGGCGATGTC GACATCATCGAGTATGTGCCCTGGTCTGCCTATTCCCGCTTCGACAATAACGACCGCATGAAACTGTCGGGTTCGCTCGG CCCCTTCCATGTGGTGCTTTTCAACACGAGCAAGCCGCCCTTCGACAATCCGCTGGTGCGCCAGGCGATCGGCTATGCCA TCAACCGCGAGGACATCGTGGCAGCAGCCTTCGCCGGCCAAGGCGAACCGCTTTATGGCTTCCCCAATCCTCCTGGTTCG GCCTACCAGGCCTCCACGCCGGAAAACAGCTATACTTACGATCCGGAAAGGGCCAAAGCGCTGCTGGCCGAGGCTGGCTA TGCCGATGGCTTCAACTGTACGCTTCTGGCAACCTCAACCTATGGCATGCTCCAGGACACGGCCGTGGTCGTTGCTGCCT ATCTCCAGGCTATCGGCATCAATGCCGAACTCAAGCTCCCCGAATGGGCCAGTCGCATCACCGCCGGCAATGAAGGCCAG TATGACATTGCCATCCATGGCACGGTGGGCGAGTACAACGACCCGGACTCGCTCTACCCGCTGCTCCACTCCTCGGTGAA GACGTTCCAGAACTCTTTCGGCTTCGCCAGCGAGCGTATCGATACCCTGCTCGAAAAGGGACGAGGCGAACTGGATCCGG CCAAGCGCGAGGAGATCTACAAACAGCTGGCCCAGGCCTATTTCGAGGAGGTGCCGCAAGCGCCCCTGGTCTGGCGTGTT CAATCCTTCGGCCTTGCCCGCAATGTGGAAGGATTCCAATGCCTGCCAGGTTTCCTCGGGGTGACGAGCACCGCGATCCT GCTCGATCAGGCCAGGTTCGTCTGA
Upstream 100 bases:
>100_bases CCGCCTAAAGAATTTTAAATTTGCCGGTGGGCTGATCGCGTCCGAAAATCTCCGACGAACATGCAAGGCAAAAAAGCCAG CAAATTGGAGGAGATAACTT
Downstream 100 bases:
>100_bases CAAATGTTGCACTCTGCGATCTCCCGGCTGGCGTCGGCCCTGAGCATGCTCTTTGTGGTCGCGACATTGGTCTTCGCCAT CCAAGTCGTCATCCCCGGCG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSRLHALTMSRRAFLAAAGAGIAAVQLPGSASAQADAGVLRYALSAFPPSLSPWLNAGAAASTVKTLIMRGLLGYDTEGQ LIGEIAESWAAVDPTTYDFKLRANAVFSNGKPVRAQDVIWTVNQISAPESTAHLRTTLNQVESMEALDDHTVRLILTKPN AALPFALASPNAAILAEGSTEDAPIACGPFRLAQQERGVFIEVERNPDYYKNGSPQVDKIRLTAYADENLRMAALESGDV DIIEYVPWSAYSRFDNNDRMKLSGSLGPFHVVLFNTSKPPFDNPLVRQAIGYAINREDIVAAAFAGQGEPLYGFPNPPGS AYQASTPENSYTYDPERAKALLAEAGYADGFNCTLLATSTYGMLQDTAVVVAAYLQAIGINAELKLPEWASRITAGNEGQ YDIAIHGTVGEYNDPDSLYPLLHSSVKTFQNSFGFASERIDTLLEKGRGELDPAKREEIYKQLAQAYFEEVPQAPLVWRV QSFGLARNVEGFQCLPGFLGVTSTAILLDQARFV
Sequences:
>Translated_514_residues MSRLHALTMSRRAFLAAAGAGIAAVQLPGSASAQADAGVLRYALSAFPPSLSPWLNAGAAASTVKTLIMRGLLGYDTEGQ LIGEIAESWAAVDPTTYDFKLRANAVFSNGKPVRAQDVIWTVNQISAPESTAHLRTTLNQVESMEALDDHTVRLILTKPN AALPFALASPNAAILAEGSTEDAPIACGPFRLAQQERGVFIEVERNPDYYKNGSPQVDKIRLTAYADENLRMAALESGDV DIIEYVPWSAYSRFDNNDRMKLSGSLGPFHVVLFNTSKPPFDNPLVRQAIGYAINREDIVAAAFAGQGEPLYGFPNPPGS AYQASTPENSYTYDPERAKALLAEAGYADGFNCTLLATSTYGMLQDTAVVVAAYLQAIGINAELKLPEWASRITAGNEGQ YDIAIHGTVGEYNDPDSLYPLLHSSVKTFQNSFGFASERIDTLLEKGRGELDPAKREEIYKQLAQAYFEEVPQAPLVWRV QSFGLARNVEGFQCLPGFLGVTSTAILLDQARFV >Mature_513_residues SRLHALTMSRRAFLAAAGAGIAAVQLPGSASAQADAGVLRYALSAFPPSLSPWLNAGAAASTVKTLIMRGLLGYDTEGQL IGEIAESWAAVDPTTYDFKLRANAVFSNGKPVRAQDVIWTVNQISAPESTAHLRTTLNQVESMEALDDHTVRLILTKPNA ALPFALASPNAAILAEGSTEDAPIACGPFRLAQQERGVFIEVERNPDYYKNGSPQVDKIRLTAYADENLRMAALESGDVD IIEYVPWSAYSRFDNNDRMKLSGSLGPFHVVLFNTSKPPFDNPLVRQAIGYAINREDIVAAAFAGQGEPLYGFPNPPGSA YQASTPENSYTYDPERAKALLAEAGYADGFNCTLLATSTYGMLQDTAVVVAAYLQAIGINAELKLPEWASRITAGNEGQY DIAIHGTVGEYNDPDSLYPLLHSSVKTFQNSFGFASERIDTLLEKGRGELDPAKREEIYKQLAQAYFEEVPQAPLVWRVQ SFGLARNVEGFQCLPGFLGVTSTAILLDQARFV
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=493, Percent_Identity=28.1947261663286, Blast_Score=178, Evalue=8e-46, Organism=Escherichia coli, GI1789966, Length=491, Percent_Identity=26.4765784114053, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1787495, Length=527, Percent_Identity=24.8576850094877, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI87081878, Length=516, Percent_Identity=23.2558139534884, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1787551, Length=532, Percent_Identity=24.4360902255639, Blast_Score=118, Evalue=9e-28, Organism=Escherichia coli, GI1789887, Length=452, Percent_Identity=25, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1787762, Length=496, Percent_Identity=24.5967741935484, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1789397, Length=488, Percent_Identity=23.155737704918, Blast_Score=96, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 55632; Mature: 55501
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLHALTMSRRAFLAAAGAGIAAVQLPGSASAQADAGVLRYALSAFPPSLSPWLNAGAA CCCHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCHH ASTVKTLIMRGLLGYDTEGQLIGEIAESWAAVDPTTYDFKLRANAVFSNGKPVRAQDVIW HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCHHHEEE TVNQISAPESTAHLRTTLNQVESMEALDDHTVRLILTKPNAALPFALASPNAAILAEGST EEHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCEEEEECCCC EDAPIACGPFRLAQQERGVFIEVERNPDYYKNGSPQVDKIRLTAYADENLRMAALESGDV CCCCEEECCHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCE DIIEYVPWSAYSRFDNNDRMKLSGSLGPFHVVLFNTSKPPFDNPLVRQAIGYAINREDIV EEEEECCCHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEE AAAFAGQGEPLYGFPNPPGSAYQASTPENSYTYDPERAKALLAEAGYADGFNCTLLATST EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECC YGMLQDTAVVVAAYLQAIGINAELKLPEWASRITAGNEGQYDIAIHGTVGEYNDPDSLYP CCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHH LLHSSVKTFQNSFGFASERIDTLLEKGRGELDPAKREEIYKQLAQAYFEEVPQAPLVWRV HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE QSFGLARNVEGFQCLPGFLGVTSTAILLDQARFV HHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRLHALTMSRRAFLAAAGAGIAAVQLPGSASAQADAGVLRYALSAFPPSLSPWLNAGAA CCHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCHH ASTVKTLIMRGLLGYDTEGQLIGEIAESWAAVDPTTYDFKLRANAVFSNGKPVRAQDVIW HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCHHHEEE TVNQISAPESTAHLRTTLNQVESMEALDDHTVRLILTKPNAALPFALASPNAAILAEGST EEHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCEEEEECCCC EDAPIACGPFRLAQQERGVFIEVERNPDYYKNGSPQVDKIRLTAYADENLRMAALESGDV CCCCEEECCHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCE DIIEYVPWSAYSRFDNNDRMKLSGSLGPFHVVLFNTSKPPFDNPLVRQAIGYAINREDIV EEEEECCCHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEE AAAFAGQGEPLYGFPNPPGSAYQASTPENSYTYDPERAKALLAEAGYADGFNCTLLATST EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECC YGMLQDTAVVVAAYLQAIGINAELKLPEWASRITAGNEGQYDIAIHGTVGEYNDPDSLYP CCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHH LLHSSVKTFQNSFGFASERIDTLLEKGRGELDPAKREEIYKQLAQAYFEEVPQAPLVWRV HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE QSFGLARNVEGFQCLPGFLGVTSTAILLDQARFV HHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA