| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632395
Identifier: 110632395
GI number: 110632395
Start: 39955
End: 40980
Strand: Reverse
Name: 110632395
Synonym: Meso_0033
Alternate gene names: NA
Gene position: 40980-39955 (Counterclockwise)
Preceding gene: 110632397
Following gene: 110632392
Centisome position: 0.93
GC content: 61.7
Gene sequence:
>1026_bases TTGGAAGTCGTAAAAAAGGCGATCAGAACCGCCCTGGAAAAGGGCGACGCGAACGACCGCGCTTTTCGCGAGAAGGTGTA CCGGCAGGCCTTTGCCGCCCTCGAGCGTTCGTTCCAGGCGCGCCGTGACCTGCCGGAGGAGGACATGCACCGCCGCCGCG AGCAGATGAAGGCGGCGATCATTGATGTGGAGCGAGAATATGTCGCGGCGGAGTCGAACCAGACGCAGCCATTCCCGACG GCGCCCTCCCCCACCGACCGGCCTTCAGGCCAGACGCCGGAAGAGGCGGTATTTGAACCCGACTTCGTGCCCCGTATCGA GCGCGAGGAGCGACTGGAGAGACGCGGCGGCACAAGACCAGACTATTCTCCGCTCAATGAAGTGCGAACGCCTGTTGCCG GCGAGCGGAAGAGGCGGCGCCCGCTCGCTTTTTCTTTGTTCATCCTCGTCCTGCTGGCGATGATCATGCTTGGCCTCTGG TGGACCATAGGCGGGATCCCAACGCCCCCCACTGCGTCAGGCGACGATACGGCAAGCTTCGGGGAAAACAGCAATGCGCC GCCCCGTCTTGCCAAAAGCTCCGCGGAAGATCAGGATTGGATCACAATTTTCTCTCCCGCCGACCCGACCACGGTGGAAG CACCGGCAGGCGGCAGCGCGGAAGCGTTGCAGCAGGGCGAGGAAGCCTATCTCCAGATCGGCGCGGAAAATCCGGGGACG GCAATTGGCTTCGATATCGGGCAGGGAGTGCTGGAGCAACTTGCCGGAAAACGTGCCGTCTTCAGCTTGAACGCGCAGGC GGCGGAAGGCGAGACGGAAATCTCCATTTCCTGCGATTTCGGCCCATTGGGCGGCTGTGGACGAACGCGCTATCAGGTCG GGAATACTTCCTCCGAATACCTTTTCGAAGTCGAGTTGCCGGACCAGCAGCCAAGCGGCGGCGGCCGGATTTCGATTTCG CCGGATGTCAGTGGGCAACGCAGGATGTTGAATGTTTTCTCATTAAGGGTGCGGGAAGCGGAGTAA
Upstream 100 bases:
>100_bases TCCACCGCACCGCCCCTATTGCGCTACTGCCGCAATCTGCGTTGATTGCATCGGCGGGTAGGGTTAACCATGGGTTAACG ACAATGCGAGGGAACCGGAT
Downstream 100 bases:
>100_bases AAAGCGAGTAGCGAATGGAATGAAAGGAGCGGAGGTCATCAAGCACCTGCGCCCTTTGGTATCATCGCCTCCAGCGTTTC GATCCGGTCCGCCTCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; BirS-Like Protein Incolved In Biotin Regulatory Network
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MEVVKKAIRTALEKGDANDRAFREKVYRQAFAALERSFQARRDLPEEDMHRRREQMKAAIIDVEREYVAAESNQTQPFPT APSPTDRPSGQTPEEAVFEPDFVPRIEREERLERRGGTRPDYSPLNEVRTPVAGERKRRRPLAFSLFILVLLAMIMLGLW WTIGGIPTPPTASGDDTASFGENSNAPPRLAKSSAEDQDWITIFSPADPTTVEAPAGGSAEALQQGEEAYLQIGAENPGT AIGFDIGQGVLEQLAGKRAVFSLNAQAAEGETEISISCDFGPLGGCGRTRYQVGNTSSEYLFEVELPDQQPSGGGRISIS PDVSGQRRMLNVFSLRVREAE
Sequences:
>Translated_341_residues MEVVKKAIRTALEKGDANDRAFREKVYRQAFAALERSFQARRDLPEEDMHRRREQMKAAIIDVEREYVAAESNQTQPFPT APSPTDRPSGQTPEEAVFEPDFVPRIEREERLERRGGTRPDYSPLNEVRTPVAGERKRRRPLAFSLFILVLLAMIMLGLW WTIGGIPTPPTASGDDTASFGENSNAPPRLAKSSAEDQDWITIFSPADPTTVEAPAGGSAEALQQGEEAYLQIGAENPGT AIGFDIGQGVLEQLAGKRAVFSLNAQAAEGETEISISCDFGPLGGCGRTRYQVGNTSSEYLFEVELPDQQPSGGGRISIS PDVSGQRRMLNVFSLRVREAE >Mature_341_residues MEVVKKAIRTALEKGDANDRAFREKVYRQAFAALERSFQARRDLPEEDMHRRREQMKAAIIDVEREYVAAESNQTQPFPT APSPTDRPSGQTPEEAVFEPDFVPRIEREERLERRGGTRPDYSPLNEVRTPVAGERKRRRPLAFSLFILVLLAMIMLGLW WTIGGIPTPPTASGDDTASFGENSNAPPRLAKSSAEDQDWITIFSPADPTTVEAPAGGSAEALQQGEEAYLQIGAENPGT AIGFDIGQGVLEQLAGKRAVFSLNAQAAEGETEISISCDFGPLGGCGRTRYQVGNTSSEYLFEVELPDQQPSGGGRISIS PDVSGQRRMLNVFSLRVREAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37470; Mature: 37470
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVVKKAIRTALEKGDANDRAFREKVYRQAFAALERSFQARRDLPEEDMHRRREQMKAAI CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IDVEREYVAAESNQTQPFPTAPSPTDRPSGQTPEEAVFEPDFVPRIEREERLERRGGTRP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCC DYSPLNEVRTPVAGERKRRRPLAFSLFILVLLAMIMLGLWWTIGGIPTPPTASGDDTASF CCCCHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GENSNAPPRLAKSSAEDQDWITIFSPADPTTVEAPAGGSAEALQQGEEAYLQIGAENPGT CCCCCCCCHHHHCCCCCCCCEEEECCCCCCEEECCCCCCHHHHHCCCCEEEEECCCCCCC AIGFDIGQGVLEQLAGKRAVFSLNAQAAEGETEISISCDFGPLGGCGRTRYQVGNTSSEY EECHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCE LFEVELPDQQPSGGGRISISPDVSGQRRMLNVFSLRVREAE EEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHEEECCC >Mature Secondary Structure MEVVKKAIRTALEKGDANDRAFREKVYRQAFAALERSFQARRDLPEEDMHRRREQMKAAI CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IDVEREYVAAESNQTQPFPTAPSPTDRPSGQTPEEAVFEPDFVPRIEREERLERRGGTRP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCC DYSPLNEVRTPVAGERKRRRPLAFSLFILVLLAMIMLGLWWTIGGIPTPPTASGDDTASF CCCCHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GENSNAPPRLAKSSAEDQDWITIFSPADPTTVEAPAGGSAEALQQGEEAYLQIGAENPGT CCCCCCCCHHHHCCCCCCCCEEEECCCCCCEEECCCCCCHHHHHCCCCEEEEECCCCCCC AIGFDIGQGVLEQLAGKRAVFSLNAQAAEGETEISISCDFGPLGGCGRTRYQVGNTSSEY EECHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCE LFEVELPDQQPSGGGRISISPDVSGQRRMLNVFSLRVREAE EEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA