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The map label for this gene is yrkJ [H]

Identifier: 110632388

GI number: 110632388

Start: 31206

End: 32123

Strand: Direct

Name: yrkJ [H]

Synonym: Meso_0026

Alternate gene names: 110632388

Gene position: 31206-32123 (Clockwise)

Preceding gene: 110632387

Following gene: 110632389

Centisome position: 0.71

GC content: 61.0

Gene sequence:

>918_bases
GTGGGCATTTATCTCCCGATCGCGGAAATGTCCGTTAACATGTTGGTCCTGCTCGCCATGGGAGGTGCCGTTGGCTTCCT
CTCGGGCATGTTCGGGGTCGGCGGCGGCTTTCTGATCACTCCATTGCTCATCTTCTACAATGTGCCGCCAGCCATTGCCG
TGGCCACCGGCGCAAATCAGGTCATCGCCTCGTCCTTTTCCGGAACGCTTAGCCACCTAAAGCGTGGCACTTTGGACGTG
AAGCTTGGGCTGGTGCTGCTGGTGGGCGGCATCATTGGCTCCGCCGCTGGCATCTATGTCTTCGCCTATCTGCGGCAGCT
CGGGTTGCTCGACCTCACCGTATCGCTGCTTTATGTGGTGCTGCTGGGCTCCGTCGGCGGGCTTATGCTGGTTGAAAGCG
TGCGTGCGATCCAACGCTCGCGCGCAGGCCAGGCGGCGTCGCTCCGGCGTCCGGGCCAGCACAATTGGATCCACCGCCTG
CCGCTCAAGATGCGCTTCCGCGCGTCAAAACTGTTTGTCAGCGTGATTCCGATTTTGGCGCTTGGCGCAATGATCGGATT
TCTCGCGTCGTTGATGGGCGTTGGTGGCGGCTTCATCATGGTGCCTGCCATGATTTACCTGCTCAAGGTGCCGACCAACG
TGGTCGTGGGAACGTCGCTTTTCCAGATCATCTTCGTCGCGGCATTCACCACCGTTTCACACGCGTATACGAACCAAACG
GTGGACGTCGTGCTTGCCTTCCTGCTCATGGTAGGCGGGGTCGCGGGCGCGCAATACGGCACGCGGGTTGGCCAAAAGCT
GCGCGGCGAACAGCTCCGGGCATTGCTCGCCCTCCTGGTCCTTGCGGTCGCGATCAGGCTCGCATTCGATCTTTTCGTGC
GGCCGTCCAGCGTCTTTTCGCTCGCGGGAGGAGTCTGA

Upstream 100 bases:

>100_bases
TTGACTTCGCTCGATTGTGGGCGCAAGAACGAAACAGTCGATTGATCATGCGCGGCGGTCCCGTCGCTTATCGTGCCTTT
TGCTTTTATTGGTGTCGCGG

Downstream 100 bases:

>100_bases
TGCCTTCTCCCCGCGTTGCCGTCCTTATCGTCGGGCTTTGCTTGGGTGGCCAAGCATTCGCGCAGCAGGAGGAACCCCAG
CCGGAAGGGATTCAGATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MGIYLPIAEMSVNMLVLLAMGGAVGFLSGMFGVGGGFLITPLLIFYNVPPAIAVATGANQVIASSFSGTLSHLKRGTLDV
KLGLVLLVGGIIGSAAGIYVFAYLRQLGLLDLTVSLLYVVLLGSVGGLMLVESVRAIQRSRAGQAASLRRPGQHNWIHRL
PLKMRFRASKLFVSVIPILALGAMIGFLASLMGVGGGFIMVPAMIYLLKVPTNVVVGTSLFQIIFVAAFTTVSHAYTNQT
VDVVLAFLLMVGGVAGAQYGTRVGQKLRGEQLRALLALLVLAVAIRLAFDLFVRPSSVFSLAGGV

Sequences:

>Translated_305_residues
MGIYLPIAEMSVNMLVLLAMGGAVGFLSGMFGVGGGFLITPLLIFYNVPPAIAVATGANQVIASSFSGTLSHLKRGTLDV
KLGLVLLVGGIIGSAAGIYVFAYLRQLGLLDLTVSLLYVVLLGSVGGLMLVESVRAIQRSRAGQAASLRRPGQHNWIHRL
PLKMRFRASKLFVSVIPILALGAMIGFLASLMGVGGGFIMVPAMIYLLKVPTNVVVGTSLFQIIFVAAFTTVSHAYTNQT
VDVVLAFLLMVGGVAGAQYGTRVGQKLRGEQLRALLALLVLAVAIRLAFDLFVRPSSVFSLAGGV
>Mature_304_residues
GIYLPIAEMSVNMLVLLAMGGAVGFLSGMFGVGGGFLITPLLIFYNVPPAIAVATGANQVIASSFSGTLSHLKRGTLDVK
LGLVLLVGGIIGSAAGIYVFAYLRQLGLLDLTVSLLYVVLLGSVGGLMLVESVRAIQRSRAGQAASLRRPGQHNWIHRLP
LKMRFRASKLFVSVIPILALGAMIGFLASLMGVGGGFIMVPAMIYLLKVPTNVVVGTSLFQIIFVAAFTTVSHAYTNQTV
DVVLAFLLMVGGVAGAQYGTRVGQKLRGEQLRALLALLVLAVAIRLAFDLFVRPSSVFSLAGGV

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 32004; Mature: 31873

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIYLPIAEMSVNMLVLLAMGGAVGFLSGMFGVGGGFLITPLLIFYNVPPAIAVATGANQ
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEEECCCHH
VIASSFSGTLSHLKRGTLDVKLGLVLLVGGIIGSAAGIYVFAYLRQLGLLDLTVSLLYVV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGSVGGLMLVESVRAIQRSRAGQAASLRRPGQHNWIHRLPLKMRFRASKLFVSVIPILA
HHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
LGAMIGFLASLMGVGGGFIMVPAMIYLLKVPTNVVVGTSLFQIIFVAAFTTVSHAYTNQT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VDVVLAFLLMVGGVAGAQYGTRVGQKLRGEQLRALLALLVLAVAIRLAFDLFVRPSSVFS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LAGGV
HCCCC
>Mature Secondary Structure 
GIYLPIAEMSVNMLVLLAMGGAVGFLSGMFGVGGGFLITPLLIFYNVPPAIAVATGANQ
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEEECCCHH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HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]