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The map label for this gene is cbbE [H]

Identifier: 110632367

GI number: 110632367

Start: 4819

End: 5490

Strand: Reverse

Name: cbbE [H]

Synonym: Meso_0005

Alternate gene names: 110632367

Gene position: 5490-4819 (Counterclockwise)

Preceding gene: 110632368

Following gene: NA

Centisome position: 0.12

GC content: 60.57

Gene sequence:

>672_bases
ATGGAAGCCAGCCGGCCCGTCAAGATCGCGCCATCCATCCTCGCCTCCGATTTCTCGCGCTTGGGTGAAGAGGTGACGGC
AGTGGCCGCGGCCGGCGCGGACTGGATTCACCTGGACATCATGGACGGGCATTTCGTTCCGAATATCACATTTGGCCCGC
CCGTCGTGAAGGCCATTCGCGACCGGACAAACAAGGTGTTCGATTGTCATCTGATGATTGCGCCGGCGGACCCTTACCTC
GCCGCCTTCGCGGAAGCGGGATGCGACGTGCTGACGGTCCATGCGGAGGCTGGCCCGCACCTCCACCGGTCGCTGCAGAC
GATCAGGAAACTGGGCAAGAAAGCGGGCGTTTCGCTCAATCCGGCAACACCGGAAAGCGCGATCGAATATGTGCTGGACG
ATGTTGACCTGATCCTGATCATGACCGTCAATCCCGGCTTCGGCGGGCAAGCCTTTATCCCTTCTGCGGTGAAGAAGATC
CGGCGTGTGAGACAGATGGTGGGCAATCGGCCGATCGACATTGAAGTGGACGGGGGCATCACCGCCGAAAATGCGGGGGC
AGTCGTTGCAGCCGGTGCCAATGTGCTTGTGGCTGGCTCCTCGATCTTTAAAGGAAATGGGGAGGACGCCTACCGGCAGA
ACATTGCCGCCATCAGGACGGCCGTTGAATAG

Upstream 100 bases:

>100_bases
CCTCCCAATTTTTCGCTGACTTCAACGCACGCGTGAGCGGCACGAATACTGCCGAAAGCGCCTGACCTAGAAAAATCCTT
GAAGTAAGGGAAAACACCCA

Downstream 100 bases:

>100_bases
CCGCTGTTTCAGGCCTGTTTCGGCCCGTAGCGGACAATCTCGAAGCGGCAGGCCAGCGCGTCGTAGAGGAGCAGGCGCCC
TATCAAGGGTTCACCGATGC

Product: ribulose-5-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MEASRPVKIAPSILASDFSRLGEEVTAVAAAGADWIHLDIMDGHFVPNITFGPPVVKAIRDRTNKVFDCHLMIAPADPYL
AAFAEAGCDVLTVHAEAGPHLHRSLQTIRKLGKKAGVSLNPATPESAIEYVLDDVDLILIMTVNPGFGGQAFIPSAVKKI
RRVRQMVGNRPIDIEVDGGITAENAGAVVAAGANVLVAGSSIFKGNGEDAYRQNIAAIRTAVE

Sequences:

>Translated_223_residues
MEASRPVKIAPSILASDFSRLGEEVTAVAAAGADWIHLDIMDGHFVPNITFGPPVVKAIRDRTNKVFDCHLMIAPADPYL
AAFAEAGCDVLTVHAEAGPHLHRSLQTIRKLGKKAGVSLNPATPESAIEYVLDDVDLILIMTVNPGFGGQAFIPSAVKKI
RRVRQMVGNRPIDIEVDGGITAENAGAVVAAGANVLVAGSSIFKGNGEDAYRQNIAAIRTAVE
>Mature_223_residues
MEASRPVKIAPSILASDFSRLGEEVTAVAAAGADWIHLDIMDGHFVPNITFGPPVVKAIRDRTNKVFDCHLMIAPADPYL
AAFAEAGCDVLTVHAEAGPHLHRSLQTIRKLGKKAGVSLNPATPESAIEYVLDDVDLILIMTVNPGFGGQAFIPSAVKKI
RRVRQMVGNRPIDIEVDGGITAENAGAVVAAGANVLVAGSSIFKGNGEDAYRQNIAAIRTAVE

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=203, Percent_Identity=40.3940886699507, Blast_Score=157, Evalue=5e-39,
Organism=Homo sapiens, GI219879828, Length=203, Percent_Identity=38.423645320197, Blast_Score=148, Evalue=3e-36,
Organism=Homo sapiens, GI24307923, Length=156, Percent_Identity=30.1282051282051, Blast_Score=78, Evalue=7e-15,
Organism=Escherichia coli, GI1789788, Length=217, Percent_Identity=47.926267281106, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1790523, Length=221, Percent_Identity=37.10407239819, Blast_Score=150, Evalue=4e-38,
Organism=Escherichia coli, GI1790754, Length=212, Percent_Identity=34.9056603773585, Blast_Score=110, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17552948, Length=229, Percent_Identity=42.3580786026201, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6322341, Length=212, Percent_Identity=41.0377358490566, Blast_Score=161, Evalue=6e-41,
Organism=Drosophila melanogaster, GI24586301, Length=216, Percent_Identity=37.037037037037, Blast_Score=155, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23543; Mature: 23543

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEASRPVKIAPSILASDFSRLGEEVTAVAAAGADWIHLDIMDGHFVPNITFGPPVVKAIR
CCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
DRTNKVFDCHLMIAPADPYLAAFAEAGCDVLTVHAEAGPHLHRSLQTIRKLGKKAGVSLN
HCCCCEEEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCC
PATPESAIEYVLDDVDLILIMTVNPGFGGQAFIPSAVKKIRRVRQMVGNRPIDIEVDGGI
CCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCE
TAENAGAVVAAGANVLVAGSSIFKGNGEDAYRQNIAAIRTAVE
EECCCCEEEEECCEEEEECCEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEASRPVKIAPSILASDFSRLGEEVTAVAAAGADWIHLDIMDGHFVPNITFGPPVVKAIR
CCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
DRTNKVFDCHLMIAPADPYLAAFAEAGCDVLTVHAEAGPHLHRSLQTIRKLGKKAGVSLN
HCCCCEEEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCC
PATPESAIEYVLDDVDLILIMTVNPGFGGQAFIPSAVKKIRRVRQMVGNRPIDIEVDGGI
CCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCE
TAENAGAVVAAGANVLVAGSSIFKGNGEDAYRQNIAAIRTAVE
EECCCCEEEEECCEEEEECCEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA