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The map label for this gene is rocE fragment 2 [H]

Identifier: 109948229

GI number: 109948229

Start: 1536162

End: 1536605

Strand: Reverse

Name: rocE fragment 2 [H]

Synonym: Hac_1763

Alternate gene names: 109948229

Gene position: 1536605-1536162 (Counterclockwise)

Preceding gene: 109948230

Following gene: 109948228

Centisome position: 98.89

GC content: 43.02

Gene sequence:

>444_bases
TTGGGGGAATTAGCGAGCGTGTATCCTACCACAGGGAGTTTTGGGGGTTATGCGAGCCGGTTTATCAACCCTAGTGCAGG
GTATATGGTCTTTTGGATGTATTGGTTGAGCTGGGTTTTAACCGTGGCAGTGCAATATATCGCTATTGGCTTGCTTATGC
AACGATGGTTTCTTGGCATTTCTGTGTATGTGTGGGTCATTGCATGTGTTGTGCTTTTATTTTTATTGAATTTCTTTTCG
GTCAAAATTTTTGCGACAAGCGAATTTTTACTCAGCACCATCAAAGTTTTAGCGGTCTTTGTGTTTACCATGCTTGGGAG
CGTTGGCATTATTTATTCGTTTTATCTGCATGGCTTTGAAGGGGTGTTTGCTAATTTCTATTTTAGTGGGGAGGTTCAAG
GGCTAGAGAAGGGCTTTTCCCTAAAGGCGTGGGGGCGATTTTAA

Upstream 100 bases:

>100_bases
TTTTTGTAGGTGCAAGAGGGAATAGCGCTAGCGTAGGTCATTTAGCCATGCTTTTAGCGTATTTAATTGGGGGGTTATCG
TTTATTCTATTGTTTTATTT

Downstream 100 bases:

>100_bases
CGGTGATTTTTGCTTACATGGGCACAGAGATTATGGGCGTTGCCGCAAGGAGAGACTAAAGACGCTAAAAAGTCATGCCC
AAAGCGGTTAAAGCGACTTT

Product: amino acid permease fragment 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MGELASVYPTTGSFGGYASRFINPSAGYMVFWMYWLSWVLTVAVQYIAIGLLMQRWFLGISVYVWVIACVVLLFLLNFFS
VKIFATSEFLLSTIKVLAVFVFTMLGSVGIIYSFYLHGFEGVFANFYFSGEVQGLEKGFSLKAWGRF

Sequences:

>Translated_147_residues
MGELASVYPTTGSFGGYASRFINPSAGYMVFWMYWLSWVLTVAVQYIAIGLLMQRWFLGISVYVWVIACVVLLFLLNFFS
VKIFATSEFLLSTIKVLAVFVFTMLGSVGIIYSFYLHGFEGVFANFYFSGEVQGLEKGFSLKAWGRF
>Mature_146_residues
GELASVYPTTGSFGGYASRFINPSAGYMVFWMYWLSWVLTVAVQYIAIGLLMQRWFLGISVYVWVIACVVLLFLLNFFSV
KIFATSEFLLSTIKVLAVFVFTMLGSVGIIYSFYLHGFEGVFANFYFSGEVQGLEKGFSLKAWGRF

Specific function: Transporter For The Intake Of S-Methylmethionine. [C]

COG id: COG0833

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081708, Length=110, Percent_Identity=39.0909090909091, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1788480, Length=111, Percent_Identity=36.9369369369369, Blast_Score=77, Evalue=5e-16,
Organism=Escherichia coli, GI87081915, Length=110, Percent_Identity=37.2727272727273, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1790653, Length=131, Percent_Identity=35.8778625954198, Blast_Score=71, Evalue=3e-14,
Organism=Escherichia coli, GI1789017, Length=137, Percent_Identity=31.3868613138686, Blast_Score=70, Evalue=5e-14,
Organism=Escherichia coli, GI1786789, Length=99, Percent_Identity=32.3232323232323, Blast_Score=65, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324059, Length=114, Percent_Identity=35.0877192982456, Blast_Score=72, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6324061, Length=99, Percent_Identity=34.3434343434343, Blast_Score=70, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6320772, Length=115, Percent_Identity=32.1739130434783, Blast_Score=69, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6321629, Length=106, Percent_Identity=33.9622641509434, Blast_Score=69, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322967, Length=97, Percent_Identity=36.0824742268041, Blast_Score=69, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6324553, Length=121, Percent_Identity=32.2314049586777, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324981, Length=91, Percent_Identity=35.1648351648352, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 16630; Mature: 16499

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGELASVYPTTGSFGGYASRFINPSAGYMVFWMYWLSWVLTVAVQYIAIGLLMQRWFLGI
CCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVYVWVIACVVLLFLLNFFSVKIFATSEFLLSTIKVLAVFVFTMLGSVGIIYSFYLHGFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFANFYFSGEVQGLEKGFSLKAWGRF
HHHHHHEECCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GELASVYPTTGSFGGYASRFINPSAGYMVFWMYWLSWVLTVAVQYIAIGLLMQRWFLGI
CCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVYVWVIACVVLLFLLNFFSVKIFATSEFLLSTIKVLAVFVFTMLGSVGIIYSFYLHGFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFANFYFSGEVQGLEKGFSLKAWGRF
HHHHHHEECCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]