| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is BCGIB
Identifier: 109948198
GI number: 109948198
Start: 1505314
End: 1506510
Strand: Reverse
Name: BCGIB
Synonym: Hac_1731
Alternate gene names: NA
Gene position: 1506510-1505314 (Counterclockwise)
Preceding gene: 109948199
Following gene: 109948197
Centisome position: 96.95
GC content: 39.01
Gene sequence:
>1197_bases GTGACAGACCCCCTTAGCAGCCAACTCAACGCTGTTAAGTGGGGCGAGTTCAGATTAGGGGATTTGTTTGAAGCGAGTAA TGGCGATTTTGACATCCAAAAACGCCACATTAATCATAGGGGCGAATTTGTCATTACCGCAGGGCTTAGCAATAATGGCG TTTTGGGGCAAAGCGATATAAAAGCAAAAGTTTTTGAAAGCCATACCATTACTATAGACATGTTTGGTTGTGCGTTTTAT CGCAGTTTTCCTTACAAAATGGTAACACACGCTAGGGTATTTTCTCTCAAACCTAAATTTGAGATTAGCCATAAAATCGG TTTGTTTTTATCCACGCTATTTTTTGGTTACCCTAAAAAATTCGGCTATGAAAACATGTGTTCATGGGCAAAAATTAAAA ATGATAAAGTCATTCTACCCCTAAAACCCACCGCTAACACTAAAACCCTCGATAGTATTGATTTCAACTTCATGGAAAAT TTTATAGCCGAACTTGAGCAGTGTCGGCTCGCCGAACTTGAGGCTTACTTAAAAGCCACAGGGCTAAAAAACACCACCCT TTCTGGCGACGAACAAAACGCCCTTAAAGCCTTTCACGAAAACGCCTTGAAATGGCAAAGCTTCAAACTGGGGGATTTGT TTGAAGTGTTGTCAAGTAAGAAAATTTATCATGCTAACACGATAAAAATTCATGACACGCAAATAGAAAACAGCTATCCT TATGTCGTGCGCGCTGCAACCAACAATGGTATAAAAGGCTTTATTATGGATGACCCTATATTTACCAATGACAAAAATAC CCTTTCATTCGCACAAGATACTTTCACGGTGTTTTATCAAAAACAACCTTATTTTACAGGCAATAAGGTTAAAGTTTTAA AACCAAAATTTGCTTTCAAAAGCCCTAAAATTTTACATTTTATAAGCGCGATTTTACAATTTATTTTAAAACCCTTGACT TGGGGGCTAGGCTCTACAACAGAAAGTATTGCAGAGTTTAAATTTTCACTACCCCTAAAACCCACCGCTAACACTAAAAC CCTCGATAGTATTGATTTCCATTTCATGCATACCCTCATCAACGCCCTAACGAAACAAATCGTTCAAGGCGTGGTTGCAT ACAGCGGCGCTCAAAAAGAAGCCGCAAAAGCCATCATCAACCAAGAAACACCCGTTCAAAAAGACTCGTTGTTTTGA
Upstream 100 bases:
>100_bases AGAATGAGACCAAACCCGCGCTAGAGGATTTTAAAAGAACGATAGCCGATTACCTTTCTTATGAAGTGGGCTTGATTTTA AAAAACCAAACGCCCCCAAA
Downstream 100 bases:
>100_bases AACCAAAACAAAGGGCTTAAAACGCCGCATTTTCTCTTTTAAACGCTTTTAAAATCAAAAGAGCTTCTTTTTCTTTGCTA TAATCAGCCTAAAAAACCAA
Product: type IIS restriction enzyme protein
Products: NA
Alternate protein names: Type II Restriction Methyltransferase; Type IIS Restriction Protein; Restriction; Type IIS Restriction R Protein; Type IIS R-M System Restriction; R Of Type II Restriction And System; Restriction Beta Subunit
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTDPLSSQLNAVKWGEFRLGDLFEASNGDFDIQKRHINHRGEFVITAGLSNNGVLGQSDIKAKVFESHTITIDMFGCAFY RSFPYKMVTHARVFSLKPKFEISHKIGLFLSTLFFGYPKKFGYENMCSWAKIKNDKVILPLKPTANTKTLDSIDFNFMEN FIAELEQCRLAELEAYLKATGLKNTTLSGDEQNALKAFHENALKWQSFKLGDLFEVLSSKKIYHANTIKIHDTQIENSYP YVVRAATNNGIKGFIMDDPIFTNDKNTLSFAQDTFTVFYQKQPYFTGNKVKVLKPKFAFKSPKILHFISAILQFILKPLT WGLGSTTESIAEFKFSLPLKPTANTKTLDSIDFHFMHTLINALTKQIVQGVVAYSGAQKEAAKAIINQETPVQKDSLF
Sequences:
>Translated_398_residues MTDPLSSQLNAVKWGEFRLGDLFEASNGDFDIQKRHINHRGEFVITAGLSNNGVLGQSDIKAKVFESHTITIDMFGCAFY RSFPYKMVTHARVFSLKPKFEISHKIGLFLSTLFFGYPKKFGYENMCSWAKIKNDKVILPLKPTANTKTLDSIDFNFMEN FIAELEQCRLAELEAYLKATGLKNTTLSGDEQNALKAFHENALKWQSFKLGDLFEVLSSKKIYHANTIKIHDTQIENSYP YVVRAATNNGIKGFIMDDPIFTNDKNTLSFAQDTFTVFYQKQPYFTGNKVKVLKPKFAFKSPKILHFISAILQFILKPLT WGLGSTTESIAEFKFSLPLKPTANTKTLDSIDFHFMHTLINALTKQIVQGVVAYSGAQKEAAKAIINQETPVQKDSLF >Mature_397_residues TDPLSSQLNAVKWGEFRLGDLFEASNGDFDIQKRHINHRGEFVITAGLSNNGVLGQSDIKAKVFESHTITIDMFGCAFYR SFPYKMVTHARVFSLKPKFEISHKIGLFLSTLFFGYPKKFGYENMCSWAKIKNDKVILPLKPTANTKTLDSIDFNFMENF IAELEQCRLAELEAYLKATGLKNTTLSGDEQNALKAFHENALKWQSFKLGDLFEVLSSKKIYHANTIKIHDTQIENSYPY VVRAATNNGIKGFIMDDPIFTNDKNTLSFAQDTFTVFYQKQPYFTGNKVKVLKPKFAFKSPKILHFISAILQFILKPLTW GLGSTTESIAEFKFSLPLKPTANTKTLDSIDFHFMHTLINALTKQIVQGVVAYSGAQKEAAKAIINQETPVQKDSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45046; Mature: 44915
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPLSSQLNAVKWGEFRLGDLFEASNGDFDIQKRHINHRGEFVITAGLSNNGVLGQSDI CCCCCCHHCCCEECCCEECCCCEECCCCCEEEEHHHCCCCCCEEEEECCCCCCCCCCCCC KAKVFESHTITIDMFGCAFYRSFPYKMVTHARVFSLKPKFEISHKIGLFLSTLFFGYPKK CEEEECCEEEEEEEHHHHHHHCCCHHHHHHEEEEECCCCEEHHHHHHHHHHHHHHCCCHH FGYENMCSWAKIKNDKVILPLKPTANTKTLDSIDFNFMENFIAELEQCRLAELEAYLKAT CCCHHHHHHHEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GLKNTTLSGDEQNALKAFHENALKWQSFKLGDLFEVLSSKKIYHANTIKIHDTQIENSYP CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECEEEEEEEEECCCCCC YVVRAATNNGIKGFIMDDPIFTNDKNTLSFAQDTFTVFYQKQPYFTGNKVKVLKPKFAFK EEEEEECCCCEEEEEECCCEEECCCCCEEECCCEEEEEEECCCCCCCCEEEEECCCCCCC SPKILHFISAILQFILKPLTWGLGSTTESIAEFKFSLPLKPTANTKTLDSIDFHFMHTLI CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHH NALTKQIVQGVVAYSGAQKEAAKAIINQETPVQKDSLF HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TDPLSSQLNAVKWGEFRLGDLFEASNGDFDIQKRHINHRGEFVITAGLSNNGVLGQSDI CCCCCHHCCCEECCCEECCCCEECCCCCEEEEHHHCCCCCCEEEEECCCCCCCCCCCCC KAKVFESHTITIDMFGCAFYRSFPYKMVTHARVFSLKPKFEISHKIGLFLSTLFFGYPKK CEEEECCEEEEEEEHHHHHHHCCCHHHHHHEEEEECCCCEEHHHHHHHHHHHHHHCCCHH FGYENMCSWAKIKNDKVILPLKPTANTKTLDSIDFNFMENFIAELEQCRLAELEAYLKAT CCCHHHHHHHEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GLKNTTLSGDEQNALKAFHENALKWQSFKLGDLFEVLSSKKIYHANTIKIHDTQIENSYP CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECEEEEEEEEECCCCCC YVVRAATNNGIKGFIMDDPIFTNDKNTLSFAQDTFTVFYQKQPYFTGNKVKVLKPKFAFK EEEEEECCCCEEEEEECCCEEECCCCCEEECCCEEEEEEECCCCCCCCEEEEECCCCCCC SPKILHFISAILQFILKPLTWGLGSTTESIAEFKFSLPLKPTANTKTLDSIDFHFMHTLI CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHH NALTKQIVQGVVAYSGAQKEAAKAIINQETPVQKDSLF HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA