Click here to switch to the map view.

The map label for this gene is fragment 2

Identifier: 109948132

GI number: 109948132

Start: 1442172

End: 1443245

Strand: Reverse

Name: fragment 2

Synonym: Hac_1655

Alternate gene names: NA

Gene position: 1443245-1442172 (Counterclockwise)

Preceding gene: 109948133

Following gene: 109948131

Centisome position: 92.88

GC content: 37.24

Gene sequence:

>1074_bases
ATGGCGAGTTTTTCAACGCTCAAATACCTTAACTCCAGCAATTTTAAAAAATTCAGAGAAGCCTTTAAGGCAAAGTTTTT
AAAAGGGTTTATGGTGCCTGCGGATAGCTTTGATAACGTGAAGGGGCAATTCCCTATTGGCTTTTTAGTGTGGGATACTG
CCAAAGCTCCCCTCAAACCAACCAGTGCAATTAATTTAGAAGCGTTTGACTCGTTTGGTGGATTTTTAGGGTATAAATAT
TATTTTGCAGATGATGAAAATCTTAAGCCCATTATCCATTTTTTACGCCCATTTTATGATAAGAAAAATGAACCTATAGC
TTTTTTACGCATGATAGGGGCAGACTTTCAAAATAGCACAGGATGTTTTCTTACCCTAACGCTCACACCAAATGATGTGG
ATAGGGTATTATTTACTCCCATCACTACACAAAATGTTATCCCTATTTTTTTGTATTTAACTATCCGCCATGTGTTCGAA
CACACATGGCAGAATGACAGAGATCAATTTTACGCCCCTTATGATAATGCATGGCAAAATGACAGCGAGTTTAAAAACAA
TTGTTTGGCGTTCATGCTTTTTCATTCGCAAAATAAAATCAGTCTTAATGCTAGTAAAACCCATGCCAAAATAGTGGAAA
TTAACCATTTTATCCCCTTTAGCGAAAAAGAAGTTGATCCTAAGGAAAGATACACCAGCCACGCTTTATTGGACTTTTTA
AAAGGCAAGAAAAATGAGGAGGGCGAAACCCTCTTTTTGAGCACTAAAAAAGAAAACAAACCTCTAGAATTTAGCCCGAG
CGCTTTAAAGGTGTTTGATGCCGGAAGAGAGATCTATCGCTACTACCACGCCCAAGATTTCACTAACACCCCTTATAACG
CTAATGCAAGCCTTTATGATATTAAAGAATTTTTTCAAGGTCGTAACGCGCAAGGCAAATTAAACTTACCCGCTAAAGCT
AAAGATGAGTGTTACAAACAGCTTTACGCTCATTTGCAAGACGCTTTAAAAGATTTAGCCAAAGAAATACAGCCTAAAGT
CTATGAATATGGGTTTTTAAGGGAGTCATTTTAA

Upstream 100 bases:

>100_bases
AAGAATAAAAGTGAATTAGGCAGTGCAGGTCGTGAGCTTTTCGCCCAATTTTTCATGCGCATTTTTCATGCGCATTTACA
AAGAGTTGAACGGCTCTGTC

Downstream 100 bases:

>100_bases
GCTAAACGGCTAACGCCCCAAAAAGTCAAAGACAAACCCACTTGAAAAGGAAACCCCTAAGCTTGAAAGCTTAAGGGAAC
TTTGGCCAGTAAATCCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MASFSTLKYLNSSNFKKFREAFKAKFLKGFMVPADSFDNVKGQFPIGFLVWDTAKAPLKPTSAINLEAFDSFGGFLGYKY
YFADDENLKPIIHFLRPFYDKKNEPIAFLRMIGADFQNSTGCFLTLTLTPNDVDRVLFTPITTQNVIPIFLYLTIRHVFE
HTWQNDRDQFYAPYDNAWQNDSEFKNNCLAFMLFHSQNKISLNASKTHAKIVEINHFIPFSEKEVDPKERYTSHALLDFL
KGKKNEEGETLFLSTKKENKPLEFSPSALKVFDAGREIYRYYHAQDFTNTPYNANASLYDIKEFFQGRNAQGKLNLPAKA
KDECYKQLYAHLQDALKDLAKEIQPKVYEYGFLRESF

Sequences:

>Translated_357_residues
MASFSTLKYLNSSNFKKFREAFKAKFLKGFMVPADSFDNVKGQFPIGFLVWDTAKAPLKPTSAINLEAFDSFGGFLGYKY
YFADDENLKPIIHFLRPFYDKKNEPIAFLRMIGADFQNSTGCFLTLTLTPNDVDRVLFTPITTQNVIPIFLYLTIRHVFE
HTWQNDRDQFYAPYDNAWQNDSEFKNNCLAFMLFHSQNKISLNASKTHAKIVEINHFIPFSEKEVDPKERYTSHALLDFL
KGKKNEEGETLFLSTKKENKPLEFSPSALKVFDAGREIYRYYHAQDFTNTPYNANASLYDIKEFFQGRNAQGKLNLPAKA
KDECYKQLYAHLQDALKDLAKEIQPKVYEYGFLRESF
>Mature_356_residues
ASFSTLKYLNSSNFKKFREAFKAKFLKGFMVPADSFDNVKGQFPIGFLVWDTAKAPLKPTSAINLEAFDSFGGFLGYKYY
FADDENLKPIIHFLRPFYDKKNEPIAFLRMIGADFQNSTGCFLTLTLTPNDVDRVLFTPITTQNVIPIFLYLTIRHVFEH
TWQNDRDQFYAPYDNAWQNDSEFKNNCLAFMLFHSQNKISLNASKTHAKIVEINHFIPFSEKEVDPKERYTSHALLDFLK
GKKNEEGETLFLSTKKENKPLEFSPSALKVFDAGREIYRYYHAQDFTNTPYNANASLYDIKEFFQGRNAQGKLNLPAKAK
DECYKQLYAHLQDALKDLAKEIQPKVYEYGFLRESF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41477; Mature: 41346

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFSTLKYLNSSNFKKFREAFKAKFLKGFMVPADSFDNVKGQFPIGFLVWDTAKAPLKP
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
TSAINLEAFDSFGGFLGYKYYFADDENLKPIIHFLRPFYDKKNEPIAFLRMIGADFQNST
CCEEEHHHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
GCFLTLTLTPNDVDRVLFTPITTQNVIPIFLYLTIRHVFEHTWQNDRDQFYAPYDNAWQN
CEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC
DSEFKNNCLAFMLFHSQNKISLNASKTHAKIVEINHFIPFSEKEVDPKERYTSHALLDFL
CHHHHCCEEEEEEEECCCEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
KGKKNEEGETLFLSTKKENKPLEFSPSALKVFDAGREIYRYYHAQDFTNTPYNANASLYD
CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
IKEFFQGRNAQGKLNLPAKAKDECYKQLYAHLQDALKDLAKEIQPKVYEYGFLRESF
HHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
ASFSTLKYLNSSNFKKFREAFKAKFLKGFMVPADSFDNVKGQFPIGFLVWDTAKAPLKP
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
TSAINLEAFDSFGGFLGYKYYFADDENLKPIIHFLRPFYDKKNEPIAFLRMIGADFQNST
CCEEEHHHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
GCFLTLTLTPNDVDRVLFTPITTQNVIPIFLYLTIRHVFEHTWQNDRDQFYAPYDNAWQN
CEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC
DSEFKNNCLAFMLFHSQNKISLNASKTHAKIVEINHFIPFSEKEVDPKERYTSHALLDFL
CHHHHCCEEEEEEEECCCEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
KGKKNEEGETLFLSTKKENKPLEFSPSALKVFDAGREIYRYYHAQDFTNTPYNANASLYD
CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
IKEFFQGRNAQGKLNLPAKAKDECYKQLYAHLQDALKDLAKEIQPKVYEYGFLRESF
HHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA