Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is yhcG [H]

Identifier: 109948078

GI number: 109948078

Start: 1390829

End: 1391515

Strand: Reverse

Name: yhcG [H]

Synonym: Hac_1596

Alternate gene names: 109948078

Gene position: 1391515-1390829 (Counterclockwise)

Preceding gene: 109948079

Following gene: 109948077

Centisome position: 89.55

GC content: 35.37

Gene sequence:

>687_bases
ATGCTAGTAGAAATAGAAAATTTGACTAAAACCTATGGGAGTTTAAAAGCGTTAGACAATATCCATTTGAAACTACCCAA
ACAGCAATTTATAGGGCTTTTAGGCCCTAATGGGGCAGGCAAAACCACTTTATTAAAAATTTTAGCCGGATTGAATTTAA
ACTATCAGGGAAAAGTGAAAATTTTAGGAAAAAATATTGGCATAGAGACGAAAAAAAGCGTGGCGTTTTTAAGCGATGGC
GATTTTTTAGACCCTAAAATAACGCCCTTAAAAGCGATCGCTTTTTATAAGGATTTTTTTAGCGATTTTGATGAATTAAA
AGCTTTAGATTTATTAAAACGCTTCAGCGTGCCTTTAAAAAGAGAGTTCAAAGCCCTTTCAAAAGGCATGAGAGAAAAGT
TACAGCTGATTTTAACCTTATCACGAAATGCTTCTTTGTATCTTTTTGATGAGCCGGTGGCTGGGATTGACCCTATTGCA
AGAGAAGAGATTTTTGAGTTAATCGCTAATGAATTGAGCCAGAATGCGAGCTTATTAGTCTCTACGCATTTGGTGGTGGA
TGTGGAAAAGTATTTAGACTGCGCAATTTTTTTAAAAGAAGCCAAAGTGGTGGCTTTTGGGAATGTGGGAGAATTAAAAA
AAGGGTATAGCAGTTTGGAAGTGGCGTATAAAGAAAAATTGAAATAA

Upstream 100 bases:

>100_bases
TGTTTTTCACACCGATTTTATGGCCTGATTTCACCCCTAAAGATTTAGAAAACATCATTAGCGATTTTTATAAAAGAGTG
CGCAAATTCGGGGAATTAAA

Downstream 100 bases:

>100_bases
ATAAGTTAGCGCTAAATCGCTTGAATAGTTTTGCATGGAATTTCTTTAAAATTTAAGTATAATTGTTAGCGTCGCCTGGA
TGATTTGCGTTTCTTATTGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLVEIENLTKTYGSLKALDNIHLKLPKQQFIGLLGPNGAGKTTLLKILAGLNLNYQGKVKILGKNIGIETKKSVAFLSDG
DFLDPKITPLKAIAFYKDFFSDFDELKALDLLKRFSVPLKREFKALSKGMREKLQLILTLSRNASLYLFDEPVAGIDPIA
REEIFELIANELSQNASLLVSTHLVVDVEKYLDCAIFLKEAKVVAFGNVGELKKGYSSLEVAYKEKLK

Sequences:

>Translated_228_residues
MLVEIENLTKTYGSLKALDNIHLKLPKQQFIGLLGPNGAGKTTLLKILAGLNLNYQGKVKILGKNIGIETKKSVAFLSDG
DFLDPKITPLKAIAFYKDFFSDFDELKALDLLKRFSVPLKREFKALSKGMREKLQLILTLSRNASLYLFDEPVAGIDPIA
REEIFELIANELSQNASLLVSTHLVVDVEKYLDCAIFLKEAKVVAFGNVGELKKGYSSLEVAYKEKLK
>Mature_228_residues
MLVEIENLTKTYGSLKALDNIHLKLPKQQFIGLLGPNGAGKTTLLKILAGLNLNYQGKVKILGKNIGIETKKSVAFLSDG
DFLDPKITPLKAIAFYKDFFSDFDELKALDLLKRFSVPLKREFKALSKGMREKLQLILTLSRNASLYLFDEPVAGIDPIA
REEIFELIANELSQNASLLVSTHLVVDVEKYLDCAIFLKEAKVVAFGNVGELKKGYSSLEVAYKEKLK

Specific function: Unknown

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27881501, Length=225, Percent_Identity=29.3333333333333, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI30795238, Length=225, Percent_Identity=29.3333333333333, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI21536376, Length=219, Percent_Identity=31.0502283105023, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI47078218, Length=226, Percent_Identity=29.646017699115, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI45446740, Length=226, Percent_Identity=29.646017699115, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI153792144, Length=223, Percent_Identity=26.0089686098655, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI27477115, Length=206, Percent_Identity=27.6699029126214, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI105990541, Length=191, Percent_Identity=29.3193717277487, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI116734710, Length=228, Percent_Identity=25.8771929824561, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI6005701, Length=207, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI27436953, Length=207, Percent_Identity=23.6714975845411, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI27262624, Length=238, Percent_Identity=28.9915966386555, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI27262626, Length=238, Percent_Identity=28.9915966386555, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI31657092, Length=229, Percent_Identity=24.4541484716157, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI48994943, Length=232, Percent_Identity=27.1551724137931, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87081782, Length=223, Percent_Identity=26.0089686098655, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790739, Length=227, Percent_Identity=26.8722466960352, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790162, Length=231, Percent_Identity=27.7056277056277, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1789991, Length=219, Percent_Identity=24.2009132420091, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1789593, Length=217, Percent_Identity=23.963133640553, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=26.6094420600858, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1788761, Length=175, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1786563, Length=205, Percent_Identity=28.780487804878, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787029, Length=219, Percent_Identity=22.3744292237443, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786319, Length=196, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081709, Length=228, Percent_Identity=24.5614035087719, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1789586, Length=227, Percent_Identity=28.1938325991189, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786803, Length=222, Percent_Identity=25.2252252252252, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1789672, Length=216, Percent_Identity=24.0740740740741, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787089, Length=228, Percent_Identity=24.5614035087719, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI48995001, Length=226, Percent_Identity=25.2212389380531, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790544, Length=229, Percent_Identity=23.1441048034935, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082268, Length=214, Percent_Identity=25.7009345794392, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790467, Length=219, Percent_Identity=25.5707762557078, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787712, Length=189, Percent_Identity=25.9259259259259, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786872, Length=217, Percent_Identity=25.3456221198157, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788225, Length=225, Percent_Identity=24.4444444444444, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787164, Length=201, Percent_Identity=25.3731343283582, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788165, Length=172, Percent_Identity=28.4883720930233, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI2367384, Length=160, Percent_Identity=28.75, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1788472, Length=226, Percent_Identity=24.3362831858407, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=233, Percent_Identity=29.6137339055794, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71983516, Length=233, Percent_Identity=29.6137339055794, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71983510, Length=233, Percent_Identity=29.6137339055794, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17565586, Length=236, Percent_Identity=26.271186440678, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17510237, Length=225, Percent_Identity=28, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI115533608, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI221512771, Length=233, Percent_Identity=30.0429184549356, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24666092, Length=224, Percent_Identity=27.6785714285714, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI116007184, Length=214, Percent_Identity=29.4392523364486, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI221500365, Length=214, Percent_Identity=29.4392523364486, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI28574150, Length=216, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI116007328, Length=216, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=6e-15,
Organism=Drosophila melanogaster, GI28573571, Length=225, Percent_Identity=23.5555555555556, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24648314, Length=228, Percent_Identity=23.6842105263158, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24650855, Length=201, Percent_Identity=27.363184079602, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24650853, Length=201, Percent_Identity=27.363184079602, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24582014, Length=237, Percent_Identity=26.5822784810127, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24582012, Length=237, Percent_Identity=26.5822784810127, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28573573, Length=219, Percent_Identity=23.7442922374429, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281362751, Length=201, Percent_Identity=27.363184079602, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24643674, Length=232, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI85725262, Length=195, Percent_Identity=28.2051282051282, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574533, Length=184, Percent_Identity=25.5434782608696, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 25396; Mature: 25396

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MLVEIENLTKTYGSLKALDNIHLKLPKQQFIGLLGPNGAGKTTLLKILAGLNLNYQGKVK
CEEEEHHHHHHHHHHHHHCCCEEECCHHHHCEEECCCCCCHHHHHHHHHCCCCCCCCEEE
ILGKNIGIETKKSVAFLSDGDFLDPKITPLKAIAFYKDFFSDFDELKALDLLKRFSVPLK
EEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHH
REFKALSKGMREKLQLILTLSRNASLYLFDEPVAGIDPIAREEIFELIANELSQNASLLV
HHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
STHLVVDVEKYLDCAIFLKEAKVVAFGNVGELKKGYSSLEVAYKEKLK
EHHHEEEHHHHHHHHHHHHHCCEEEECCHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MLVEIENLTKTYGSLKALDNIHLKLPKQQFIGLLGPNGAGKTTLLKILAGLNLNYQGKVK
CEEEEHHHHHHHHHHHHHCCCEEECCHHHHCEEECCCCCCHHHHHHHHHCCCCCCCCEEE
ILGKNIGIETKKSVAFLSDGDFLDPKITPLKAIAFYKDFFSDFDELKALDLLKRFSVPLK
EEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHH
REFKALSKGMREKLQLILTLSRNASLYLFDEPVAGIDPIAREEIFELIANELSQNASLLV
HHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
STHLVVDVEKYLDCAIFLKEAKVVAFGNVGELKKGYSSLEVAYKEKLK
EHHHEEEHHHHHHHHHHHHHCCEEEECCHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]