| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is 109948071
Identifier: 109948071
GI number: 109948071
Start: 1382076
End: 1382744
Strand: Reverse
Name: 109948071
Synonym: Hac_1588
Alternate gene names: NA
Gene position: 1382744-1382076 (Counterclockwise)
Preceding gene: 109948072
Following gene: 109948069
Centisome position: 88.98
GC content: 36.17
Gene sequence:
>669_bases ATGGCGCTTGAAGTGGTTCTATGGGATTTTGATGGCGTGATTTTTGATAGCATGCATTTAAAATATGAAGGATTTAAGGC GTTGTTCCAAAAGCATGGAAACGATGATAAAGAGAGTTTGAATCAATTTGAAGTTTATCATTATCAAAGTGGGGGGATTT CAAGGAATGAAAAGATCCAATACTTTTATAACGAGATTTTAAAAACCTCTATTACTCAAGAAGAAGTGGAACGATTAGCC CTAGAGTTTGGCGCTATTATAGAGCAAAAGCTTTTTGATAGGGGGCATTTGAATAGTGAAGTGATGGCGTTTATTGATAA GCACTATCAAAATTATACTTTTCATATCGCTTCAGCGGCCTTGCATAGTGAATTACAAGTGTTGTGTGAGTTTTTAGGGA TTGTTGAGTATTTTAAGAGTATTGAAGGGAGTCCGCCCCATAAACCTAAAATCATTGATAATATCATTCAAGAATACGCC TATAACCCAAGCCGCATGCTAATGATAGGCGATAGCATCAATGACTATGAAAGCGCTAAAGCTAATGAAGTGGCGTTTTT AGGTTATAACAGCAAGGTTTTGAAAAATTTAGTGGGTCAAAATGGCTACCAAGGGAAGTATTTAGAGAGCTTTAAGGGGT TTGATTTGCAAAACCTTATAAAAGAGTGA
Upstream 100 bases:
>100_bases CCAATACCCAAAACAAATCCAAATATTCCAATGATGACAAAAATAATCGCTTAAATAAGATAAAATGAAACCAAATAAAC CTATAAGAAAGGGAAAGTTA
Downstream 100 bases:
>100_bases AGCTAATCAGCCAAGTTGTTCTTTGTGCTTGCTCATATCAATGATGACTTCACAGCGTTCAATCGTGCTTAAGCGGTGGG CGATAACAATTAGGGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Haloacid Dehalogenase Domain Protein Hydrolase; HAD Family Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase Family Protein; Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MALEVVLWDFDGVIFDSMHLKYEGFKALFQKHGNDDKESLNQFEVYHYQSGGISRNEKIQYFYNEILKTSITQEEVERLA LEFGAIIEQKLFDRGHLNSEVMAFIDKHYQNYTFHIASAALHSELQVLCEFLGIVEYFKSIEGSPPHKPKIIDNIIQEYA YNPSRMLMIGDSINDYESAKANEVAFLGYNSKVLKNLVGQNGYQGKYLESFKGFDLQNLIKE
Sequences:
>Translated_222_residues MALEVVLWDFDGVIFDSMHLKYEGFKALFQKHGNDDKESLNQFEVYHYQSGGISRNEKIQYFYNEILKTSITQEEVERLA LEFGAIIEQKLFDRGHLNSEVMAFIDKHYQNYTFHIASAALHSELQVLCEFLGIVEYFKSIEGSPPHKPKIIDNIIQEYA YNPSRMLMIGDSINDYESAKANEVAFLGYNSKVLKNLVGQNGYQGKYLESFKGFDLQNLIKE >Mature_221_residues ALEVVLWDFDGVIFDSMHLKYEGFKALFQKHGNDDKESLNQFEVYHYQSGGISRNEKIQYFYNEILKTSITQEEVERLAL EFGAIIEQKLFDRGHLNSEVMAFIDKHYQNYTFHIASAALHSELQVLCEFLGIVEYFKSIEGSPPHKPKIIDNIIQEYAY NPSRMLMIGDSINDYESAKANEVAFLGYNSKVLKNLVGQNGYQGKYLESFKGFDLQNLIKE
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25679; Mature: 25548
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEVVLWDFDGVIFDSMHLKYEGFKALFQKHGNDDKESLNQFEVYHYQSGGISRNEKIQ CCEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCCCCCHHHH YFYNEILKTSITQEEVERLALEFGAIIEQKLFDRGHLNSEVMAFIDKHYQNYTFHIASAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEHHHHHH LHSELQVLCEFLGIVEYFKSIEGSPPHKPKIIDNIIQEYAYNPSRMLMIGDSINDYESAK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHCCC ANEVAFLGYNSKVLKNLVGQNGYQGKYLESFKGFDLQNLIKE CCCEEEECCCHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHCC >Mature Secondary Structure ALEVVLWDFDGVIFDSMHLKYEGFKALFQKHGNDDKESLNQFEVYHYQSGGISRNEKIQ CEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCCCCCHHHH YFYNEILKTSITQEEVERLALEFGAIIEQKLFDRGHLNSEVMAFIDKHYQNYTFHIASAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEHHHHHH LHSELQVLCEFLGIVEYFKSIEGSPPHKPKIIDNIIQEYAYNPSRMLMIGDSINDYESAK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHCCC ANEVAFLGYNSKVLKNLVGQNGYQGKYLESFKGFDLQNLIKE CCCEEEECCCHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA