Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is fragment 2

Identifier: 109948035

GI number: 109948035

Start: 1341910

End: 1342173

Strand: Reverse

Name: fragment 2

Synonym: Hac_1548

Alternate gene names: NA

Gene position: 1342173-1341910 (Counterclockwise)

Preceding gene: 109948036

Following gene: 109948034

Centisome position: 86.37

GC content: 37.5

Gene sequence:

>264_bases
GTGCTTTATGAAGTTTATAAGCAACGAGCGTTGGACTATGGCGAGTTTTTAGAAAGCCAAAAAGAGAGCTTTATTGTAGA
TGAGCAAAATCCTTATCCGCAAAAAGTCGCATTCAATGATCGGCGTTTAACGGAGTTTGATAGCGTTTTTAGCACGATTG
TGCCTTTAGAAAATTTAAATAAAACCGCATGCACTCATCATGCCTTAAAGGCTTTACAAGCTACGAATAAGGATTTGGGC
TTTGATGTAATAGAATTGGAGTAA

Upstream 100 bases:

>100_bases
ATGAGTACCGAGCGATTTGAGCGTGCATTCTTTGATAATTTAGAAATAGAGTTAGAGCGATCCACACAAAATTTGAACCA
AAAAATAGAGCCTGTTTTTA

Downstream 100 bases:

>100_bases
ATCGTGCAAGGACTCATTCCTAGGGGCTATTTGTGGTATTTTGACGCAAATATTTTAGGGAATTTGGCGTTAGTGAGAGA
AGAGTTGCTATTAGGGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MLYEVYKQRALDYGEFLESQKESFIVDEQNPYPQKVAFNDRRLTEFDSVFSTIVPLENLNKTACTHHALKALQATNKDLG
FDVIELE

Sequences:

>Translated_87_residues
MLYEVYKQRALDYGEFLESQKESFIVDEQNPYPQKVAFNDRRLTEFDSVFSTIVPLENLNKTACTHHALKALQATNKDLG
FDVIELE
>Mature_87_residues
MLYEVYKQRALDYGEFLESQKESFIVDEQNPYPQKVAFNDRRLTEFDSVFSTIVPLENLNKTACTHHALKALQATNKDLG
FDVIELE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10115; Mature: 10115

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYEVYKQRALDYGEFLESQKESFIVDEQNPYPQKVAFNDRRLTEFDSVFSTIVPLENLN
CCHHHHHHHCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHCCC
KTACTHHALKALQATNKDLGFDVIELE
HHHHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MLYEVYKQRALDYGEFLESQKESFIVDEQNPYPQKVAFNDRRLTEFDSVFSTIVPLENLN
CCHHHHHHHCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHCCC
KTACTHHALKALQATNKDLGFDVIELE
HHHHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA