Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109948015

Identifier: 109948015

GI number: 109948015

Start: 1327075

End: 1328844

Strand: Reverse

Name: 109948015

Synonym: Hac_1525

Alternate gene names: NA

Gene position: 1328844-1327075 (Counterclockwise)

Preceding gene: 109948016

Following gene: 109948005

Centisome position: 85.52

GC content: 40.79

Gene sequence:

>1770_bases
ATGAAGATTATAAAAATATTTTTGATGATAACCATTAGCCTAAACGCTATAAGCGTGAATAAGGCGTTGTTTGATTTAAA
AGATGCGCAATTAAAAGGGGATTTAGTCTCTAAAGCGGTGGATATTGGGGGGTATCAAAGCAACACTAAAGAGTGGGGGG
CTACCGCTTTAAATTATATTAATGCGGCTAATGGCGATGCGAAAAAATTCAGTGCATTGGTGGAAAAAATGCGTTTTGGC
TCTAATTTATTGGGGACTTTAGGAATGCATGCACGTTTAAAACAGGCTTTAAAATTGCAAAAAGATTTGCAATACTACCT
TAAGATCATCGCTAGGGATTCTTTTTACAGTTACCGCACCGGTATTTATATCCCTTTAGGCGTTTCTTTAAAAGATCAAA
AAACGGCTCAAAAAATGCTCGCTAATTTGAGTGTGGTCACGGCGTATCTCAAAAAGCAACAAGAAAGCCAAAAAGTCCAA
AGCCCTTATTACAGGAATAATTATTACAACCCCATGAATTACTATAACCCTTATTATGGCATGTATGGGATGGGCATGTA
TGGAATGTATGGCGGTTTGTATGGGGGATTTTTTGATGGATTGTATGGCTTTTACCCTAGCATGTTTTTCATGGCACAGG
TTCAAGATTACTTGATGTTAGAAGATTACATGTATGCAATAGACAACGAAGAAAGCTTGGAGCATGAGGATGACAACCAG
TTGAATGCACCTACTGATGATAAATCCCAACAACCAACCGATCTCATGAGCTTTTATCGTGATCCTAAATTCAGTAAAGA
TATTCAAACCAACCGCTTAAACCATGCCCTAATCAATTTAGACAATGGCCATACGCTCAAAGACAACGCGCTTTTTAAAA
CTAATGCCATGCCCGCTAAAAGCGTCAATGCGATCACTTCTCAAGCCAAAGAGCTGGACCATTTAGTGGGGCAAATCAGA
GAAATGAAGCAAGATGGGGCGAGCCCTAGCAAGATTGATGCAGTTGTTAATAAAGCTATGGAAGTTAGAGACAAGCTGGA
TAATAACCTTAATCAACTAGATAGCAGCTTAAAAGACTCTCAAAAAGGGCTTTCAAGCGAGCAACAAGCTCAAGTGGATA
AAGCGCTAGACAGTGTGCAACAATTAAGCCATAGCAGCGATGTGGTAGGAAACTATTTAGATGGGAGTTTGAAAATTGAT
GGCGATGATAGAGACAATGCAGACGATTTGGCGAATAACCCCATTCAAACGCCCATCAATGATGCAGACAATATGCACAC
AGATGATGACAAAGACAAGGGAAATAACGCGCTCATAAACCCTAACAACCCCACGGATATTAAAACCGATGGCGCCGCTG
ACACAAAGGGGAGCGACACTGACAATAAAGATGATAACACTAACATTGATGCTAACGATAACAGCAACGCTAACGACACC
GACGATAAAAACACCAACGGCATGGATAATACCGACGATACCAATAACACTGATGCGAACGACATGAACGATAATAACGC
TGATGATTCGAATAACATGAACGATAATAACGCTGATGATTCGAATAACATGAACGATAGCTCCAATGATACCAACGACG
ATTCAAGCAACATGAACGATGACATGAATGACGACATGAGTGGCACAAACGACATGGGTAATGGCGATTCTGGTGATATG
GGGGACAACGATGATATGGGTGGTAGCGATGATATGGGTGGTAGCGATGATATGGGTGACATGGGCGATATGGGCGATAT
GGGGAATTGA

Upstream 100 bases:

>100_bases
AAGATAATCAAATAAAGTTAAAAAACCCATTTTTTTAAAATCCCGTTTAGGTTTCTAAAAATAGTCTATAATGCTCATAA
GAGATATTTTAAGGTTATAG

Downstream 100 bases:

>100_bases
TAACAAAATTTAAAAAACGCTAGAAAAAGCGTTTTTTATAATCTTATAAAAGGGCTTGATTTGAATCCAAGCGATAACCG
CTTTTAAAAGAGGTTTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MKIIKIFLMITISLNAISVNKALFDLKDAQLKGDLVSKAVDIGGYQSNTKEWGATALNYINAANGDAKKFSALVEKMRFG
SNLLGTLGMHARLKQALKLQKDLQYYLKIIARDSFYSYRTGIYIPLGVSLKDQKTAQKMLANLSVVTAYLKKQQESQKVQ
SPYYRNNYYNPMNYYNPYYGMYGMGMYGMYGGLYGGFFDGLYGFYPSMFFMAQVQDYLMLEDYMYAIDNEESLEHEDDNQ
LNAPTDDKSQQPTDLMSFYRDPKFSKDIQTNRLNHALINLDNGHTLKDNALFKTNAMPAKSVNAITSQAKELDHLVGQIR
EMKQDGASPSKIDAVVNKAMEVRDKLDNNLNQLDSSLKDSQKGLSSEQQAQVDKALDSVQQLSHSSDVVGNYLDGSLKID
GDDRDNADDLANNPIQTPINDADNMHTDDDKDKGNNALINPNNPTDIKTDGAADTKGSDTDNKDDNTNIDANDNSNANDT
DDKNTNGMDNTDDTNNTDANDMNDNNADDSNNMNDNNADDSNNMNDSSNDTNDDSSNMNDDMNDDMSGTNDMGNGDSGDM
GDNDDMGGSDDMGGSDDMGDMGDMGDMGN

Sequences:

>Translated_589_residues
MKIIKIFLMITISLNAISVNKALFDLKDAQLKGDLVSKAVDIGGYQSNTKEWGATALNYINAANGDAKKFSALVEKMRFG
SNLLGTLGMHARLKQALKLQKDLQYYLKIIARDSFYSYRTGIYIPLGVSLKDQKTAQKMLANLSVVTAYLKKQQESQKVQ
SPYYRNNYYNPMNYYNPYYGMYGMGMYGMYGGLYGGFFDGLYGFYPSMFFMAQVQDYLMLEDYMYAIDNEESLEHEDDNQ
LNAPTDDKSQQPTDLMSFYRDPKFSKDIQTNRLNHALINLDNGHTLKDNALFKTNAMPAKSVNAITSQAKELDHLVGQIR
EMKQDGASPSKIDAVVNKAMEVRDKLDNNLNQLDSSLKDSQKGLSSEQQAQVDKALDSVQQLSHSSDVVGNYLDGSLKID
GDDRDNADDLANNPIQTPINDADNMHTDDDKDKGNNALINPNNPTDIKTDGAADTKGSDTDNKDDNTNIDANDNSNANDT
DDKNTNGMDNTDDTNNTDANDMNDNNADDSNNMNDNNADDSNNMNDSSNDTNDDSSNMNDDMNDDMSGTNDMGNGDSGDM
GDNDDMGGSDDMGGSDDMGDMGDMGDMGN
>Mature_589_residues
MKIIKIFLMITISLNAISVNKALFDLKDAQLKGDLVSKAVDIGGYQSNTKEWGATALNYINAANGDAKKFSALVEKMRFG
SNLLGTLGMHARLKQALKLQKDLQYYLKIIARDSFYSYRTGIYIPLGVSLKDQKTAQKMLANLSVVTAYLKKQQESQKVQ
SPYYRNNYYNPMNYYNPYYGMYGMGMYGMYGGLYGGFFDGLYGFYPSMFFMAQVQDYLMLEDYMYAIDNEESLEHEDDNQ
LNAPTDDKSQQPTDLMSFYRDPKFSKDIQTNRLNHALINLDNGHTLKDNALFKTNAMPAKSVNAITSQAKELDHLVGQIR
EMKQDGASPSKIDAVVNKAMEVRDKLDNNLNQLDSSLKDSQKGLSSEQQAQVDKALDSVQQLSHSSDVVGNYLDGSLKID
GDDRDNADDLANNPIQTPINDADNMHTDDDKDKGNNALINPNNPTDIKTDGAADTKGSDTDNKDDNTNIDANDNSNANDT
DDKNTNGMDNTDDTNNTDANDMNDNNADDSNNMNDNNADDSNNMNDSSNDTNDDSSNMNDDMNDDMSGTNDMGNGDSGDM
GDNDDMGGSDDMGGSDDMGDMGDMGDMGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65092; Mature: 65092

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA