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The map label for this gene is ISHa1152 tnpB fragment 2

Identifier: 109947979

GI number: 109947979

Start: 1292800

End: 1292901

Strand: Reverse

Name: ISHa1152 tnpB fragment 2

Synonym: Hac_1485

Alternate gene names: NA

Gene position: 1292901-1292800 (Counterclockwise)

Preceding gene: 109947980

Following gene: 109947978

Centisome position: 83.2

GC content: 32.35

Gene sequence:

>102_bases
TTGCACAAACGCTATTATAGACTTTTTAAAAAGCATTTAAAGCTCTACGATTTGCAAAAACACACCACCAAATTAAAAAA
GGCCCATCGTTATGCTTTTTGA

Upstream 100 bases:

>100_bases
ACCATGTTGATAGCCTACAAACAAAAGCTCTACACTAACAATAAGAATAGGCGTATAGACACACTATTAAGGCGTTATGG
CGTGCTGTATAATCATTGCA

Downstream 100 bases:

>100_bases
AAAACGCTAGGCTCACAAACCTTGCAAGACTTAACTGAAAGGGCAGATAAGGCGTATAAAAAATTCTTTAAGAAACAAGC
CAAATTGCCACGATTTAAAA

Product: ISHa1152 transposase B fragment 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 33; Mature: 33

Protein sequence:

>33_residues
MHKRYYRLFKKHLKLYDLQKHTTKLKKAHRYAF

Sequences:

>Translated_33_residues
MHKRYYRLFKKHLKLYDLQKHTTKLKKAHRYAF
>Mature_33_residues
MHKRYYRLFKKHLKLYDLQKHTTKLKKAHRYAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4292; Mature: 4292

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKRYYRLFKKHLKLYDLQKHTTKLKKAHRYAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHKRYYRLFKKHLKLYDLQKHTTKLKKAHRYAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA