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The map label for this gene is mcp [H]

Identifier: 109947973

GI number: 109947973

Start: 1286086

End: 1288113

Strand: Reverse

Name: mcp [H]

Synonym: Hac_1478

Alternate gene names: 109947973

Gene position: 1288113-1286086 (Counterclockwise)

Preceding gene: 109947976

Following gene: 109947972

Centisome position: 82.89

GC content: 39.25

Gene sequence:

>2028_bases
TTGTCTAAAGGTTTGAGTATCGGTAATAAAATTATAGTGTGGGTGGCGTTGATCGTGATCGTGTGCGTGAGCATTTTAGG
GGTGTCCTTAAACAACAAGGTGAAAGAGATTTTAAAAGAAAACGCCTTGCATTCCATGCAAGATAGCTTGCATTTCAAGG
TTAAGGAAGTGCAATCGGTTCTTGAAAATATTTATACGAGCCTAGGCGTCGTTAAAAACATGCTCCCTCAAGACACCAAG
AGAGAAGTCAAAATCAAATTGTTAAAAAACTTCATTTGGGCTAATTCGCATGTCGCTGGGGTGAGCATGTTTTTTAAAGA
CAGAGAAGATTTGAGATTGACGCTTTTACGAGACAGTGATGCGATTAAGCTAGTGGAAAATCAAACATTAGGGAATAACC
CTTTAGTGCAAAAAGTAATGAAAACTAAAGAAATCGCTAAAAGCTTGCCTTTTTATAGGAAAATGCCTGATGGCAAGGAA
GTTTATGGGCTTCATGTACTTTTGCCTTTATTGAGCGAAAACACGCAAGAAGTGGTGGGGGCTTTGATGATTTTCCTTTC
CATTGACAGCTTCAATAATGAAATCACTAAAAATAGGAGCGATTTGTTTTTAATTGGCGTCAAGGGTAAAGTGCTTTTGA
GCGCCAATAAGAGTTTGCAAGACAAATCCATCACCGAAATTTATAAAAGCGTGCCTAAAGCCACTGACGAAGTGATGGCT
ATTTTAGAAAATGGCTCTAAAGCGACTTTAGAATACTTAGATCCTTTCACTCATAAAGACAATTATTTAGCCGTTGAAAC
CTTTAAAATGCTAGGGAATAAGATAACTGGGGATAATGTGAATTGGATGGTGGCTTTAGTTATTGAAAAAGATAAGGTCT
ATGATCAAGTGGGATCGGTGCGTTTTGTGGTGGTTATAGCGAGCGTGATCATGGTTTTAGCTTTAATCGTGGCGATCACT
TTCTTAATGCGAGCGATTGTGAGCAATCGTTTAGAAATCGTTTCTAGCACCTTGTCTCATTTCTTTAAATTATTGAACAA
TCAAGCCAATTCCAACGATATTAAATTGATTGAAGCCAAGTCCAACGATGAATTAGGGCGCATGCAAACAGCGATCAATA
AAAATATCTTGCAAACCCAAAAAATCATGCAAGAAGACAGGCAAGCCGTCCAAGACACCATTAAAGTGGTTTCAGATGTG
AAAGCAGGGAATTTTGCGGTGCGCATCAATGCTGAGCCAGCAAGCCCTGATTTAAAAGAATTGAGAGACGCTTTAAATGG
GATCATGGATTATTTGCAAGAAAGCGTAGGGACTCACATGCCAAGCATTTTTAAAATCTTTGAAAGCTATTCTGGTTTGG
ATTTTAGAGGGCGGATCCAAAACGCTTCGGGTAGGGTGGAATTGGTCACTAACGCTTTAGGGCAAGAAATCCAAAAAATG
CTAGAAACCTCGTCTAATTTTGCAAAAGATTTGGCGAACGACAGCGTGAATTTGAAAGAATGCGTGCAAAATTTAGAAAA
GGCTTCAAACTCCCAACACAAAAGCTTGATGGAAACTTCCAAAACGATAGAAAATATCACCACTTCCATTCAAGGCGTGA
GCTCTCAAAGTGAAGCCATGATCGAGCAAGGGCATGACATTAAAAGCATTGTAGAAATCATTAGAGACATTGCTGATCAA
ACGAATTTATTAGCCCTAAACGCTGCTATTGAAGCCGCAAGAGCCGGCGAGCATGGGAGAGGCTTTGCGGTGGTGGCTGA
TGAAGTGCGAAAGCTCGCTGAAAGGACGCAAAAATCGCTCAGTGAAATTGAAGCGAATATTAATATTCTTGTTCAAAGTA
TTTCAGACACGAGCGAGAGCATTAAAAACCAGGTTAAAGAAGTAGAAGAGATCAACGCTTCTATTGAAGCCTTAAGATCG
GTTACTGAGGGCAATCTAAAAATCGCTAGCGATTCTTTAGAAATCAGTCAAGAAATTGACAAGGTCTCTAACGATATTTT
AGAAGATGTGAATAAAAAGCAGTTTTAA

Upstream 100 bases:

>100_bases
TTATTTTAATCTTTGTTTTACGATTATAAGACTATAATAATGGAGATTAGAATTTTGCCCAATGAACGGGCAAAAAATTT
TATTATAGTGAGGTTGTGTT

Downstream 100 bases:

>100_bases
TGCTCATTCATATTTGCTGCTCGGTGGATAACCTTTATTTTTTAAAAAAAGCCAAAGAGGCTTTTGTGGGTGAAAAAATT
ATAGGGTTTTTTTATAACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 675; Mature: 674

Protein sequence:

>675_residues
MSKGLSIGNKIIVWVALIVIVCVSILGVSLNNKVKEILKENALHSMQDSLHFKVKEVQSVLENIYTSLGVVKNMLPQDTK
REVKIKLLKNFIWANSHVAGVSMFFKDREDLRLTLLRDSDAIKLVENQTLGNNPLVQKVMKTKEIAKSLPFYRKMPDGKE
VYGLHVLLPLLSENTQEVVGALMIFLSIDSFNNEITKNRSDLFLIGVKGKVLLSANKSLQDKSITEIYKSVPKATDEVMA
ILENGSKATLEYLDPFTHKDNYLAVETFKMLGNKITGDNVNWMVALVIEKDKVYDQVGSVRFVVVIASVIMVLALIVAIT
FLMRAIVSNRLEIVSSTLSHFFKLLNNQANSNDIKLIEAKSNDELGRMQTAINKNILQTQKIMQEDRQAVQDTIKVVSDV
KAGNFAVRINAEPASPDLKELRDALNGIMDYLQESVGTHMPSIFKIFESYSGLDFRGRIQNASGRVELVTNALGQEIQKM
LETSSNFAKDLANDSVNLKECVQNLEKASNSQHKSLMETSKTIENITTSIQGVSSQSEAMIEQGHDIKSIVEIIRDIADQ
TNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSISDTSESIKNQVKEVEEINASIEALRS
VTEGNLKIASDSLEISQEIDKVSNDILEDVNKKQF

Sequences:

>Translated_675_residues
MSKGLSIGNKIIVWVALIVIVCVSILGVSLNNKVKEILKENALHSMQDSLHFKVKEVQSVLENIYTSLGVVKNMLPQDTK
REVKIKLLKNFIWANSHVAGVSMFFKDREDLRLTLLRDSDAIKLVENQTLGNNPLVQKVMKTKEIAKSLPFYRKMPDGKE
VYGLHVLLPLLSENTQEVVGALMIFLSIDSFNNEITKNRSDLFLIGVKGKVLLSANKSLQDKSITEIYKSVPKATDEVMA
ILENGSKATLEYLDPFTHKDNYLAVETFKMLGNKITGDNVNWMVALVIEKDKVYDQVGSVRFVVVIASVIMVLALIVAIT
FLMRAIVSNRLEIVSSTLSHFFKLLNNQANSNDIKLIEAKSNDELGRMQTAINKNILQTQKIMQEDRQAVQDTIKVVSDV
KAGNFAVRINAEPASPDLKELRDALNGIMDYLQESVGTHMPSIFKIFESYSGLDFRGRIQNASGRVELVTNALGQEIQKM
LETSSNFAKDLANDSVNLKECVQNLEKASNSQHKSLMETSKTIENITTSIQGVSSQSEAMIEQGHDIKSIVEIIRDIADQ
TNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSISDTSESIKNQVKEVEEINASIEALRS
VTEGNLKIASDSLEISQEIDKVSNDILEDVNKKQF
>Mature_674_residues
SKGLSIGNKIIVWVALIVIVCVSILGVSLNNKVKEILKENALHSMQDSLHFKVKEVQSVLENIYTSLGVVKNMLPQDTKR
EVKIKLLKNFIWANSHVAGVSMFFKDREDLRLTLLRDSDAIKLVENQTLGNNPLVQKVMKTKEIAKSLPFYRKMPDGKEV
YGLHVLLPLLSENTQEVVGALMIFLSIDSFNNEITKNRSDLFLIGVKGKVLLSANKSLQDKSITEIYKSVPKATDEVMAI
LENGSKATLEYLDPFTHKDNYLAVETFKMLGNKITGDNVNWMVALVIEKDKVYDQVGSVRFVVVIASVIMVLALIVAITF
LMRAIVSNRLEIVSSTLSHFFKLLNNQANSNDIKLIEAKSNDELGRMQTAINKNILQTQKIMQEDRQAVQDTIKVVSDVK
AGNFAVRINAEPASPDLKELRDALNGIMDYLQESVGTHMPSIFKIFESYSGLDFRGRIQNASGRVELVTNALGQEIQKML
ETSSNFAKDLANDSVNLKECVQNLEKASNSQHKSLMETSKTIENITTSIQGVSSQSEAMIEQGHDIKSIVEIIRDIADQT
NLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSISDTSESIKNQVKEVEEINASIEALRSV
TEGNLKIASDSLEISQEIDKVSNDILEDVNKKQF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=211, Percent_Identity=33.6492890995261, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1787690, Length=165, Percent_Identity=40.6060606060606, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788195, Length=170, Percent_Identity=37.6470588235294, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI1789453, Length=108, Percent_Identity=42.5925925925926, Blast_Score=80, Evalue=6e-16,
Organism=Escherichia coli, GI1788194, Length=204, Percent_Identity=31.3725490196078, Blast_Score=80, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 75021; Mature: 74890

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGLSIGNKIIVWVALIVIVCVSILGVSLNNKVKEILKENALHSMQDSLHFKVKEVQSV
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LENIYTSLGVVKNMLPQDTKREVKIKLLKNFIWANSHVAGVSMFFKDREDLRLTLLRDSD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCC
AIKLVENQTLGNNPLVQKVMKTKEIAKSLPFYRKMPDGKEVYGLHVLLPLLSENTQEVVG
CEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCHHHHHH
ALMIFLSIDSFNNEITKNRSDLFLIGVKGKVLLSANKSLQDKSITEIYKSVPKATDEVMA
HHHHHHHHHHHCCHHHCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHH
ILENGSKATLEYLDPFTHKDNYLAVETFKMLGNKITGDNVNWMVALVIEKDKVYDQVGSV
HHHCCCCHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEEEEHHHHHHHHCCH
RFVVVIASVIMVLALIVAITFLMRAIVSNRLEIVSSTLSHFFKLLNNQANSNDIKLIEAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
SNDELGRMQTAINKNILQTQKIMQEDRQAVQDTIKVVSDVKAGNFAVRINAEPASPDLKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH
LRDALNGIMDYLQESVGTHMPSIFKIFESYSGLDFRGRIQNASGRVELVTNALGQEIQKM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LETSSNFAKDLANDSVNLKECVQNLEKASNSQHKSLMETSKTIENITTSIQGVSSQSEAM
HHCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IEQGHDIKSIVEIIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSL
HHCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SEIEANINILVQSISDTSESIKNQVKEVEEINASIEALRSVTEGNLKIASDSLEISQEID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH
KVSNDILEDVNKKQF
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKGLSIGNKIIVWVALIVIVCVSILGVSLNNKVKEILKENALHSMQDSLHFKVKEVQSV
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LENIYTSLGVVKNMLPQDTKREVKIKLLKNFIWANSHVAGVSMFFKDREDLRLTLLRDSD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCC
AIKLVENQTLGNNPLVQKVMKTKEIAKSLPFYRKMPDGKEVYGLHVLLPLLSENTQEVVG
CEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCHHHHHH
ALMIFLSIDSFNNEITKNRSDLFLIGVKGKVLLSANKSLQDKSITEIYKSVPKATDEVMA
HHHHHHHHHHHCCHHHCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHH
ILENGSKATLEYLDPFTHKDNYLAVETFKMLGNKITGDNVNWMVALVIEKDKVYDQVGSV
HHHCCCCHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEEEEHHHHHHHHCCH
RFVVVIASVIMVLALIVAITFLMRAIVSNRLEIVSSTLSHFFKLLNNQANSNDIKLIEAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
SNDELGRMQTAINKNILQTQKIMQEDRQAVQDTIKVVSDVKAGNFAVRINAEPASPDLKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH
LRDALNGIMDYLQESVGTHMPSIFKIFESYSGLDFRGRIQNASGRVELVTNALGQEIQKM
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LETSSNFAKDLANDSVNLKECVQNLEKASNSQHKSLMETSKTIENITTSIQGVSSQSEAM
HHCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IEQGHDIKSIVEIIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSL
HHCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SEIEANINILVQSISDTSESIKNQVKEVEEINASIEALRSVTEGNLKIASDSLEISQEID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH
KVSNDILEDVNKKQF
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]