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The map label for this gene is pabC [C]

Identifier: 109947924

GI number: 109947924

Start: 1234372

End: 1235367

Strand: Reverse

Name: pabC [C]

Synonym: Hac_1424

Alternate gene names: 109947924

Gene position: 1235367-1234372 (Counterclockwise)

Preceding gene: 109947947

Following gene: 109947922

Centisome position: 79.5

GC content: 36.95

Gene sequence:

>996_bases
ATGACGACTAAAAGAGTGAATACTGCCACAAAAAAAATAATGACATTAAATACTTTTTTAGATATGTGTTTTCTTTTATT
CATCGGCGTTCTTTTTTATTTAAGTATACCAATTTATTCTAACAAAGTGGTGGTTGTCCCGCAAGGTTCGCTCAAAAAAG
TGTTTTTCTCTCTAAAAGAGCAGGGAGTGGATATTAACGCTTTGGATTGGCTTTTTTTACGCCTAATGGGCATGCCTAAA
AAAGGTTATATTGACATGGGCGATGGGGCTTTAAGGAAAGGGGATTTTTTAGTCCGTTTGATTAAGGGAAAAGCAGCTCA
TAGAAGCGTGACTTTAATCCCTGGAGAAACCCGCTATTTTTTCACGCAAATTTTGAGCGAGACTTACCAACTAGAAGCAA
GCGATCTTAATCAAGCTTATGAAAGCATCGCACCCCGATTAAACGGCTCTGTGATAGAAGATGGAGTGATACTACCAGAC
ACTTATCATTTGCCTTTAGGAGAGAATGCGTTTAAAATCATGCAAGCTTTGATCGGTCAATCTATGAAAAAACACGAAGC
TTTAAGCAAACAATGGCTTGGATACTACCATAAAGAAGAGTGGTTTGAAAAGATCATTCTCGCTTCTATTGTGCAAAAAG
AAGCCGCCAATATTGAAGAAATGCCCTTGATTGCGAGCGTGATTTTTAACCGCCTAAAAAAAGGCATGCTTTTGCAAATG
GATGGGGCTTTGAATTACCAAGAGTTTTCACATATCAAAGTAACTAAAGATCGCATTAAAAACGATAGCACCCCCTACAA
CACTTATAGGTTTAAGGGCTTGCCTAAAAACCCTGTAGGGAGCGTGAGTATAGAAGCGATTAAGGCTGTGATTTTCCCTA
AAGAAACCAACTTTTTGTATTTTGTGAAAATGCCCAATAAAAAACATGCCTTTAGCACAACTTATAGGGAACATTTGAAA
AATATTAATATTTCTAGTAACCATTTTTATGATTAG

Upstream 100 bases:

>100_bases
TAAAGAAAGTTTGTTATTAAGTTTTAAGTATAATCCAGAAACACTAAACTTTCCGATTTTTAAATTTTGTATATGCACGC
CGTTTGAAAGGGTCTTGTGA

Downstream 100 bases:

>100_bases
GGTTAATGGGGCGTTTTTTCTTCTAAAATGATTAAAAAGTGTTTAATATTTTCTCATTTTAATTTTAAGTTCCTACTATT
GAAACATTTTAGAATTTATT

Product: aminodeoxychorismate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MTTKRVNTATKKIMTLNTFLDMCFLLFIGVLFYLSIPIYSNKVVVVPQGSLKKVFFSLKEQGVDINALDWLFLRLMGMPK
KGYIDMGDGALRKGDFLVRLIKGKAAHRSVTLIPGETRYFFTQILSETYQLEASDLNQAYESIAPRLNGSVIEDGVILPD
TYHLPLGENAFKIMQALIGQSMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANIEEMPLIASVIFNRLKKGMLLQM
DGALNYQEFSHIKVTKDRIKNDSTPYNTYRFKGLPKNPVGSVSIEAIKAVIFPKETNFLYFVKMPNKKHAFSTTYREHLK
NINISSNHFYD

Sequences:

>Translated_331_residues
MTTKRVNTATKKIMTLNTFLDMCFLLFIGVLFYLSIPIYSNKVVVVPQGSLKKVFFSLKEQGVDINALDWLFLRLMGMPK
KGYIDMGDGALRKGDFLVRLIKGKAAHRSVTLIPGETRYFFTQILSETYQLEASDLNQAYESIAPRLNGSVIEDGVILPD
TYHLPLGENAFKIMQALIGQSMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANIEEMPLIASVIFNRLKKGMLLQM
DGALNYQEFSHIKVTKDRIKNDSTPYNTYRFKGLPKNPVGSVSIEAIKAVIFPKETNFLYFVKMPNKKHAFSTTYREHLK
NINISSNHFYD
>Mature_330_residues
TTKRVNTATKKIMTLNTFLDMCFLLFIGVLFYLSIPIYSNKVVVVPQGSLKKVFFSLKEQGVDINALDWLFLRLMGMPKK
GYIDMGDGALRKGDFLVRLIKGKAAHRSVTLIPGETRYFFTQILSETYQLEASDLNQAYESIAPRLNGSVIEDGVILPDT
YHLPLGENAFKIMQALIGQSMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANIEEMPLIASVIFNRLKKGMLLQMD
GALNYQEFSHIKVTKDRIKNDSTPYNTYRFKGLPKNPVGSVSIEAIKAVIFPKETNFLYFVKMPNKKHAFSTTYREHLKN
INISSNHFYD

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=238, Percent_Identity=29.4117647058824, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 37903; Mature: 37772

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKRVNTATKKIMTLNTFLDMCFLLFIGVLFYLSIPIYSNKVVVVPQGSLKKVFFSLKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEEEECCHHHHHHHHHHH
QGVDINALDWLFLRLMGMPKKGYIDMGDGALRKGDFLVRLIKGKAAHRSVTLIPGETRYF
CCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHH
FTQILSETYQLEASDLNQAYESIAPRLNGSVIEDGVILPDTYHLPLGENAFKIMQALIGQ
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECCCEECCCCEECCCCCCHHHHHHHHHHH
SMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANIEEMPLIASVIFNRLKKGMLLQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEE
DGALNYQEFSHIKVTKDRIKNDSTPYNTYRFKGLPKNPVGSVSIEAIKAVIFPKETNFLY
CCCCCHHHHHHEEEEHHHHCCCCCCCCCEEECCCCCCCCCCEEHHHHHEEEEECCCCEEE
FVKMPNKKHAFSTTYREHLKNINISSNHFYD
EEECCCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TTKRVNTATKKIMTLNTFLDMCFLLFIGVLFYLSIPIYSNKVVVVPQGSLKKVFFSLKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEEEECCHHHHHHHHHHH
QGVDINALDWLFLRLMGMPKKGYIDMGDGALRKGDFLVRLIKGKAAHRSVTLIPGETRYF
CCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHH
FTQILSETYQLEASDLNQAYESIAPRLNGSVIEDGVILPDTYHLPLGENAFKIMQALIGQ
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECCCEECCCCEECCCCCCHHHHHHHHHHH
SMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANIEEMPLIASVIFNRLKKGMLLQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEE
DGALNYQEFSHIKVTKDRIKNDSTPYNTYRFKGLPKNPVGSVSIEAIKAVIFPKETNFLY
CCCCCHHHHHHEEEEHHHHCCCCCCCCCEEECCCCCCCCCCEEHHHHHEEEEECCCCEEE
FVKMPNKKHAFSTTYREHLKNINISSNHFYD
EEECCCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]