Click here to switch to the map view.

The map label for this gene is oorB [H]

Identifier: 109947920

GI number: 109947920

Start: 1231901

End: 1232722

Strand: Reverse

Name: oorB [H]

Synonym: Hac_1421

Alternate gene names: 109947920

Gene position: 1232722-1231901 (Counterclockwise)

Preceding gene: 109947921

Following gene: 109947919

Centisome position: 79.33

GC content: 42.7

Gene sequence:

>822_bases
ATGGCGTTTAATTATGATGAATATTTGCGTGTGGATAAAATACCCACTTTGTGGTGTTGGGGCTGTGGCGATGGCGTGAT
TTTGAAATCCATTATCCGCACGATTGATGCGTTAGGTTGGAAAATGGATGATGTGTGCTTGGTGAGTGGGATTGGTTGCA
GTGGGCGCATGAGCTCGTATGTGAATTGCAACACCGTTCATACCACGCATGGCAGAGCCGTAGCGTATGCGACAGGGATT
AAATTAGCTAACCCAAGTAAGCATGTGATCGTGGTTTCTGGCGATGGCGATGGCTTTGCTATTGGGGGTAATCACACCAT
GCATGCATGCAGAAGAAACATTGATTTGAATTTTATTTTAGTGAATAATTTTATTTATGGTTTGACCAACTCTCAAACTT
CACCCACTACGCCTAATGGCATGTGGACGGTTACGGCTCAATGGGGCAATATTGATAACCAATTTGATCCATGCGCTTTA
ACCACGGCTGCTGGGGCGAGTTTTGTGGCTAGAGAGAGCGTTTTAGACCCTCAAAAATTAGAAAGAGTGCTTAAAGAAGG
CTTTTTACACAAAGGCTTTAGCTTTTTTGATATCCATAGTAATTGCCATATCAATTTAGGGCGTAAGAATAAAATGGGCG
AAGCGTCTCAAATGCTCAAATGGATTGAAAGCCGGTTAGTGAGTAAACGCCAATTTGAAGCCATGAGCCCTGAAGAAAGG
GTGGATAAATTCCCTACCGGCATTTTAAAGCATGACACGGACAGGAAAGAATATTGCGAAGCGTATCAAGAAATCATTGG
AAAAGCACAAGGAAAACAATAA

Upstream 100 bases:

>100_bases
ATTGAAAGGGCTATGCAAAGAAAGGTGCATTTCTTTGGGCAAGCCAATGGGCGCACGATTTCGCCCAAACAAATCATCGC
AAAGTTGAAGGAGCTTTAAA

Downstream 100 bases:

>100_bases
TGGAAGTGCAATTACGATTTACGGGTGTTGGAGGGCAAGGCGTGTTGTTAGCAGGGGAAATTTTAGCTGAAGCGAAAATT
GTGAGTGGGGGCTATGGCAC

Product: 2-oxoglutarate-acceptor oxidoreductase subunit OorB

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGI
KLANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCAL
TTAAGASFVARESVLDPQKLERVLKEGFLHKGFSFFDIHSNCHINLGRKNKMGEASQMLKWIESRLVSKRQFEAMSPEER
VDKFPTGILKHDTDRKEYCEAYQEIIGKAQGKQ

Sequences:

>Translated_273_residues
MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGI
KLANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCAL
TTAAGASFVARESVLDPQKLERVLKEGFLHKGFSFFDIHSNCHINLGRKNKMGEASQMLKWIESRLVSKRQFEAMSPEER
VDKFPTGILKHDTDRKEYCEAYQEIIGKAQGKQ
>Mature_272_residues
AFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGIK
LANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALT
TAAGASFVARESVLDPQKLERVLKEGFLHKGFSFFDIHSNCHINLGRKNKMGEASQMLKWIESRLVSKRQFEAMSPEERV
DKFPTGILKHDTDRKEYCEAYQEIIGKAQGKQ

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 30389; Mature: 30258

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSY
CCCCHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
VNCNTVHTTHGRAVAYATGIKLANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFIL
EECCEEEECCCCEEEEEECEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHCCCEEEEE
VNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKL
ECCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHCCCHHHHHHHCCCHHHH
ERVLKEGFLHKGFSFFDIHSNCHINLGRKNKMGEASQMLKWIESRLVSKRQFEAMSPEER
HHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VDKFPTGILKHDTDRKEYCEAYQEIIGKAQGKQ
HHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSY
CCCHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
VNCNTVHTTHGRAVAYATGIKLANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFIL
EECCEEEECCCCEEEEEECEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHCCCEEEEE
VNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKL
ECCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHCCCHHHHHHHCCCHHHH
ERVLKEGFLHKGFSFFDIHSNCHINLGRKNKMGEASQMLKWIESRLVSKRQFEAMSPEER
HHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VDKFPTGILKHDTDRKEYCEAYQEIIGKAQGKQ
HHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9108258 [H]