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The map label for this gene is omp27

Identifier: 109947864

GI number: 109947864

Start: 1175034

End: 1176449

Strand: Reverse

Name: omp27

Synonym: Hac_1355

Alternate gene names: NA

Gene position: 1176449-1175034 (Counterclockwise)

Preceding gene: 109947874

Following gene: 109947863

Centisome position: 75.71

GC content: 41.53

Gene sequence:

>1416_bases
ATGATCACCCTTTCTTTATTATTGGCGAGCATGTGTTTGTGTAACGCTGAAGAAGATGGGGTGTTTTTTGTCATTGATTA
CCAGACGAGTTTGGCCAGACAGGAATTGAAAAATCCAGGCTATATCCAAGCGCAAAATTTAAAACAATCGCTAAAAGATG
GGGCTTTGAGATTGCAAACCGCTGCCGTTCCTTTAGCTTTCTACTTGGACATGCTAGCGAATAAGGCTAAAACTCTTGTT
GCAGGTGCAAACGGCACGATGCAAGCAGGGCGGTCGCAAAGTGCACAAACTGAAACAAATCCAGCCCTAGAACAATTGGC
AACATCCATAGGCATTTTAGGGGGATTATTAAATTTGTCTCAACAATATGCCGATCAAAATATCGTTAAACCTTTAGCGA
TAGATGTAGGGGGTCAAGAGGTCAATATCACAGACGGCATGCTTTTAGCGGCTAAAAGCGTTGTTTTTGCGTTAGGGCAG
GTGGGTTTGAAGCAAAACACTAACAACAATCTATACCAAAATTTGATGGAAACCATGCTCTTAGGCACGAATGGGACAAA
TGGCGAATACAACGGTGTGAGCGTGGGCGATATTGCTACAGGTATGCAAAAATTCACTTCGCAAGCGAGCTTGATAGGAG
CGGATTCTACCATCAGCCAGCTTGACGCTTTAGTGAATAACGGCGTTTCTTTAGCCAAAGATACTTTAGGGTTAGGGGAT
TTTGTTGAACAAAATATTTGTAACAATAATGTATCATCGTGCTTGACCAATTCAAATTACCAGCAAGGGCTAGAGCGATC
AAAAGCTTTGGTTAGGTATAATTTAGCCCAGTTTGAAAATGCGTCTAAATCCCTTTATAAAATTTCTTATATCCCTAATC
TTTCTTCCACTAAAGATTATCGATCAGCGAGCATGAACGGCTTTGGAGCCAAAATTGGCTATAAGCAATTTTTCACTGAA
AAGAAAAATATTGGCTTAAGGTATTATGGGTTTGTGGATTATGGCTATGCGAGTTTTGGCGATACGAGTTTAAAGGTGGG
AACCAATTTGGTGACTTATGGGGTAGGGACGGACTTTTTATACAATTTCTTTGAACGCTCTAGAAGAAGAGAAAAAACCT
CAATCGGTCTTTTTGTGGGTGCACAAATCGCTGGGCAAACTTGGGATTCTAATGTGGTGCACTTGTTGGATGGGGCAAAG
CCTAAAATCAATTCCACTTCGTTTCAGTTTTTATTCGATCTAGGCGTGCGCACCAACTTTGCAAAAAGGAAGATTCGTAA
GAAAAGGGTCGATCAGGGGTTGGAATTTGGGGTGAAAATCCCTGTCATCGCCCATCAGTATTTTAAGGCTCAAGGCTCAA
GCGCGAGCTATATGCGTAATTTTAGCTTCTATGTGGGCTATGCAGTGGGTTTTTAA

Upstream 100 bases:

>100_bases
ATTATTTTACAATTTAAAAGATTTTTGTATTGCATTGAGTTAAAATCGTCCATTAACTACAAGTAAAAGGATCTTTTTGA
AAAACCACTCCTTTAAGAAA

Downstream 100 bases:

>100_bases
GGAGGGCTCTTGATGAAAAAAGCGAATACAAAAGAGATAGAGAATACAAGAATGAAAAAGGGTCAATACCAAACACTCAA
AAAAGGGCTTTTAAAAACCG

Product: outer membrane protein 27

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Adhesin; Outer Membrane Protein HopB; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MITLSLLLASMCLCNAEEDGVFFVIDYQTSLARQELKNPGYIQAQNLKQSLKDGALRLQTAAVPLAFYLDMLANKAKTLV
AGANGTMQAGRSQSAQTETNPALEQLATSIGILGGLLNLSQQYADQNIVKPLAIDVGGQEVNITDGMLLAAKSVVFALGQ
VGLKQNTNNNLYQNLMETMLLGTNGTNGEYNGVSVGDIATGMQKFTSQASLIGADSTISQLDALVNNGVSLAKDTLGLGD
FVEQNICNNNVSSCLTNSNYQQGLERSKALVRYNLAQFENASKSLYKISYIPNLSSTKDYRSASMNGFGAKIGYKQFFTE
KKNIGLRYYGFVDYGYASFGDTSLKVGTNLVTYGVGTDFLYNFFERSRRREKTSIGLFVGAQIAGQTWDSNVVHLLDGAK
PKINSTSFQFLFDLGVRTNFAKRKIRKKRVDQGLEFGVKIPVIAHQYFKAQGSSASYMRNFSFYVGYAVGF

Sequences:

>Translated_471_residues
MITLSLLLASMCLCNAEEDGVFFVIDYQTSLARQELKNPGYIQAQNLKQSLKDGALRLQTAAVPLAFYLDMLANKAKTLV
AGANGTMQAGRSQSAQTETNPALEQLATSIGILGGLLNLSQQYADQNIVKPLAIDVGGQEVNITDGMLLAAKSVVFALGQ
VGLKQNTNNNLYQNLMETMLLGTNGTNGEYNGVSVGDIATGMQKFTSQASLIGADSTISQLDALVNNGVSLAKDTLGLGD
FVEQNICNNNVSSCLTNSNYQQGLERSKALVRYNLAQFENASKSLYKISYIPNLSSTKDYRSASMNGFGAKIGYKQFFTE
KKNIGLRYYGFVDYGYASFGDTSLKVGTNLVTYGVGTDFLYNFFERSRRREKTSIGLFVGAQIAGQTWDSNVVHLLDGAK
PKINSTSFQFLFDLGVRTNFAKRKIRKKRVDQGLEFGVKIPVIAHQYFKAQGSSASYMRNFSFYVGYAVGF
>Mature_471_residues
MITLSLLLASMCLCNAEEDGVFFVIDYQTSLARQELKNPGYIQAQNLKQSLKDGALRLQTAAVPLAFYLDMLANKAKTLV
AGANGTMQAGRSQSAQTETNPALEQLATSIGILGGLLNLSQQYADQNIVKPLAIDVGGQEVNITDGMLLAAKSVVFALGQ
VGLKQNTNNNLYQNLMETMLLGTNGTNGEYNGVSVGDIATGMQKFTSQASLIGADSTISQLDALVNNGVSLAKDTLGLGD
FVEQNICNNNVSSCLTNSNYQQGLERSKALVRYNLAQFENASKSLYKISYIPNLSSTKDYRSASMNGFGAKIGYKQFFTE
KKNIGLRYYGFVDYGYASFGDTSLKVGTNLVTYGVGTDFLYNFFERSRRREKTSIGLFVGAQIAGQTWDSNVVHLLDGAK
PKINSTSFQFLFDLGVRTNFAKRKIRKKRVDQGLEFGVKIPVIAHQYFKAQGSSASYMRNFSFYVGYAVGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51370; Mature: 51370

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLSLLLASMCLCNAEEDGVFFVIDYQTSLARQELKNPGYIQAQNLKQSLKDGALRLQT
CEEHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCEEHHHHHHHHHCCCEEEHH
AAVPLAFYLDMLANKAKTLVAGANGTMQAGRSQSAQTETNPALEQLATSIGILGGLLNLS
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QQYADQNIVKPLAIDVGGQEVNITDGMLLAAKSVVFALGQVGLKQNTNNNLYQNLMETML
HHHHHCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LGTNGTNGEYNGVSVGDIATGMQKFTSQASLIGADSTISQLDALVNNGVSLAKDTLGLGD
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCHH
FVEQNICNNNVSSCLTNSNYQQGLERSKALVRYNLAQFENASKSLYKISYIPNLSSTKDY
HHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH
RSASMNGFGAKIGYKQFFTEKKNIGLRYYGFVDYGYASFGDTSLKVGTNLVTYGVGTDFL
HHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEECCCEEEECCCHHHH
YNFFERSRRREKTSIGLFVGAQIAGQTWDSNVVHLLDGAKPKINSTSFQFLFDLGVRTNF
HHHHHHHHHHHHHHEEEEEECEECCCCCCCCEEEEECCCCCCCCCCHHEEEEECCCCCHH
AKRKIRKKRVDQGLEFGVKIPVIAHQYFKAQGSSASYMRNFSFYVGYAVGF
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHEEEEEEECC
>Mature Secondary Structure
MITLSLLLASMCLCNAEEDGVFFVIDYQTSLARQELKNPGYIQAQNLKQSLKDGALRLQT
CEEHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCEEHHHHHHHHHCCCEEEHH
AAVPLAFYLDMLANKAKTLVAGANGTMQAGRSQSAQTETNPALEQLATSIGILGGLLNLS
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QQYADQNIVKPLAIDVGGQEVNITDGMLLAAKSVVFALGQVGLKQNTNNNLYQNLMETML
HHHHHCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LGTNGTNGEYNGVSVGDIATGMQKFTSQASLIGADSTISQLDALVNNGVSLAKDTLGLGD
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCHH
FVEQNICNNNVSSCLTNSNYQQGLERSKALVRYNLAQFENASKSLYKISYIPNLSSTKDY
HHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH
RSASMNGFGAKIGYKQFFTEKKNIGLRYYGFVDYGYASFGDTSLKVGTNLVTYGVGTDFL
HHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEECCCEEEECCCHHHH
YNFFERSRRREKTSIGLFVGAQIAGQTWDSNVVHLLDGAKPKINSTSFQFLFDLGVRTNF
HHHHHHHHHHHHHHEEEEEECEECCCCCCCCEEEEECCCCCCCCCCHHEEEEECCCCCHH
AKRKIRKKRVDQGLEFGVKIPVIAHQYFKAQGSSASYMRNFSFYVGYAVGF
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA