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The map label for this gene is Hac prophage I orf2

Identifier: 109947845

GI number: 109947845

Start: 1153745

End: 1155343

Strand: Reverse

Name: Hac prophage I orf2

Synonym: Hac_1335

Alternate gene names: NA

Gene position: 1155343-1153745 (Counterclockwise)

Preceding gene: 109947846

Following gene: 109947843

Centisome position: 74.35

GC content: 35.65

Gene sequence:

>1599_bases
TTGGAAAGAGAGTTTAGTCATATCTATGTTTTGAATTTGCGTGGCAATGCTAGAACACAAGGCGAAGAAAGAAGACAAGA
GGGCGACGGAGTTTTTGATAGTGGCTCAAGAACTCCAGTGGCTATAACACTCTTAATTAGAGATGATAAACATAAGCAAG
GCGACAAGGCAAAAATCTACTACTACGACATAGGCGACTATCTGAGCAGAGAACAAAAGCTAGGATATTTGTATCAGTGG
AAAGATATATCAAGAGTTAATTTTACCAAGCTAGAACCAAACAGATTTAACGACTGGATAAATCCAAGAGATGAGAGCTT
TGAGAGGTATGTAGAAATAGCAAACAAAGATACCAAATTCAAGGATGGATTAGATATTTTTAAAGTATTTTCAATGGGTG
TGGTAACAGCGAGAGATGTTTGGGCTTATAATTTTTCTAAAGATAATTTACTTAAAAACATACAATCTTGTATAACTTTT
TATAACATTGAAAGAGCAAGGTATGCTAAAGACAAAACATATAATATAGATATGAACCCTAAAAAAATATCGTGGAGCAG
AAAGGCTTTAAACTACTGCAAGAAAGATAAAAAAGTTGAATTTGATGCTAATAAGGCAAGACTTTGTTTGTATAGACCAT
ATAGTAAAGCTTGGCTTTACTATGACACTGCATTTAACGAAATGCAGTATCAGCTGGATAATATATATCCAGCTGATACT
AGCGTCCGCGATGCGTCCGCCGATTCTGCTTCGCAGATTTTAGGTAATTTAAGCATTTCTTTAAACGATAAAGGTGGCGG
AGAGTTTGGTGCTTTAATCGCAAATCAAATTAGCGATTTGCATTTATTTCCTCAAACACAAATCTTCCCACTCTACTACT
ACGAAAAAGCAGACCCAAATTCAATACTAGACAATGGCAATACAGACACCTACGAAAGAAAAGATGCTATCCGTGATTGG
GCGTTAGCAGAATTTCAAAAAGCATACAAGGATGACAAGATAACAAAAGAGGACATATTCTATTACATTTACGGGCTTTT
TCACAGCAAAGAATATGTAAATAAATTTAAAAACAATCTATCCAAAATGCTCCCACGAATTCCGTTTTGTAAAGACTTTT
GGGGCTTTTCTAAAGCTGGTAGAGAGTTAGCTAGCTTACACCTTAATTATGAAACAATAGAGATAAAACAAAGCACAGCA
AAATACAACACAACAGTATCTAAAACAGAGCAGACTGCACTATTTGATGAGCCTGAATACTTGGCAGAGAGCGATTACAA
AGTAAGCAAAATGAAGTTCGCAAAAAACGTGAAAATAGCCCACAAACCAAGCACCATAATCTACAACACAAAGATAAACA
TAACCAACATACCAGCTAAAGCCTATGATTATGTAGTCAATGGCAAACCAGCCCTGTCTTGGATAATGGAACGCTACCAA
GTCAAAACAGATGATGCTAGCGGCATCACAAACGACCCAAATCTATACAGCGAAGACCCACGCTATATTTTGGATTTGAT
GTTAAAAGTTATTGAAGTAAGCGTTCGTAGCGTGGATTTAATAAACAACTTACCAAAATTAGAAATTATAGAAAACTAA

Upstream 100 bases:

>100_bases
CATACGCTGGGCTAGTGATAGAATAAAAACAGGTATTATAGGCTATGTAACAAATGGTAGCTTTATAGATGGTAATAGCG
ATGATGGATTGAGGGCTTGT

Downstream 100 bases:

>100_bases
ACAACCTCTACCGTTCGGCTCTTGACCGAACGATAGAGCTATTGCTGTTTAAAGGTAACTAATGAAACGCATACCATTAC
CGAGCATAGCAGATGTTGGC

Product: helicase

Products: NA

Alternate protein names: Helicase; Adenine Specific DNA Methyltransferase; Superfamily II DNA/RNA Helicase; Type III Restriction Protein Res Subunit; Type III Restriction Res Subunit; Helicase Domain Protein; N-6 DNA Methylase; Helicase Domain-Containing Protein; Endonuclease And Methylase LlaGI; II DNA/RNA Helicase; ATP-Dependent RNA Helicase; Type II R-M System Protein; D12 Class N6 Adenine-Specific DNA Methyltransferase; Restriction- System LlaBIII; Restriction/; DNA Helicase Restriction Type III R Subunit

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MEREFSHIYVLNLRGNARTQGEERRQEGDGVFDSGSRTPVAITLLIRDDKHKQGDKAKIYYYDIGDYLSREQKLGYLYQW
KDISRVNFTKLEPNRFNDWINPRDESFERYVEIANKDTKFKDGLDIFKVFSMGVVTARDVWAYNFSKDNLLKNIQSCITF
YNIERARYAKDKTYNIDMNPKKISWSRKALNYCKKDKKVEFDANKARLCLYRPYSKAWLYYDTAFNEMQYQLDNIYPADT
SVRDASADSASQILGNLSISLNDKGGGEFGALIANQISDLHLFPQTQIFPLYYYEKADPNSILDNGNTDTYERKDAIRDW
ALAEFQKAYKDDKITKEDIFYYIYGLFHSKEYVNKFKNNLSKMLPRIPFCKDFWGFSKAGRELASLHLNYETIEIKQSTA
KYNTTVSKTEQTALFDEPEYLAESDYKVSKMKFAKNVKIAHKPSTIIYNTKINITNIPAKAYDYVVNGKPALSWIMERYQ
VKTDDASGITNDPNLYSEDPRYILDLMLKVIEVSVRSVDLINNLPKLEIIEN

Sequences:

>Translated_532_residues
MEREFSHIYVLNLRGNARTQGEERRQEGDGVFDSGSRTPVAITLLIRDDKHKQGDKAKIYYYDIGDYLSREQKLGYLYQW
KDISRVNFTKLEPNRFNDWINPRDESFERYVEIANKDTKFKDGLDIFKVFSMGVVTARDVWAYNFSKDNLLKNIQSCITF
YNIERARYAKDKTYNIDMNPKKISWSRKALNYCKKDKKVEFDANKARLCLYRPYSKAWLYYDTAFNEMQYQLDNIYPADT
SVRDASADSASQILGNLSISLNDKGGGEFGALIANQISDLHLFPQTQIFPLYYYEKADPNSILDNGNTDTYERKDAIRDW
ALAEFQKAYKDDKITKEDIFYYIYGLFHSKEYVNKFKNNLSKMLPRIPFCKDFWGFSKAGRELASLHLNYETIEIKQSTA
KYNTTVSKTEQTALFDEPEYLAESDYKVSKMKFAKNVKIAHKPSTIIYNTKINITNIPAKAYDYVVNGKPALSWIMERYQ
VKTDDASGITNDPNLYSEDPRYILDLMLKVIEVSVRSVDLINNLPKLEIIEN
>Mature_532_residues
MEREFSHIYVLNLRGNARTQGEERRQEGDGVFDSGSRTPVAITLLIRDDKHKQGDKAKIYYYDIGDYLSREQKLGYLYQW
KDISRVNFTKLEPNRFNDWINPRDESFERYVEIANKDTKFKDGLDIFKVFSMGVVTARDVWAYNFSKDNLLKNIQSCITF
YNIERARYAKDKTYNIDMNPKKISWSRKALNYCKKDKKVEFDANKARLCLYRPYSKAWLYYDTAFNEMQYQLDNIYPADT
SVRDASADSASQILGNLSISLNDKGGGEFGALIANQISDLHLFPQTQIFPLYYYEKADPNSILDNGNTDTYERKDAIRDW
ALAEFQKAYKDDKITKEDIFYYIYGLFHSKEYVNKFKNNLSKMLPRIPFCKDFWGFSKAGRELASLHLNYETIEIKQSTA
KYNTTVSKTEQTALFDEPEYLAESDYKVSKMKFAKNVKIAHKPSTIIYNTKINITNIPAKAYDYVVNGKPALSWIMERYQ
VKTDDASGITNDPNLYSEDPRYILDLMLKVIEVSVRSVDLINNLPKLEIIEN

Specific function: Unknown

COG id: COG4889

COG function: function code R; Predicted helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62087; Mature: 62087

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEREFSHIYVLNLRGNARTQGEERRQEGDGVFDSGSRTPVAITLLIRDDKHKQGDKAKIY
CCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE
YYDIGDYLSREQKLGYLYQWKDISRVNFTKLEPNRFNDWINPRDESFERYVEIANKDTKF
EEECHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCC
KDGLDIFKVFSMGVVTARDVWAYNFSKDNLLKNIQSCITFYNIERARYAKDKTYNIDMNP
CCCHHHHHHHHCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
KKISWSRKALNYCKKDKKVEFDANKARLCLYRPYSKAWLYYDTAFNEMQYQLDNIYPADT
CCCCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCEEEEEECHHHHHHHHHHCCCCCCC
SVRDASADSASQILGNLSISLNDKGGGEFGALIANQISDLHLFPQTQIFPLYYYEKADPN
CCCCCCCCHHHHHHHCEEEEEECCCCCHHHHHHHHHHHCEEECCCCEEEEEEEEECCCCC
SILDNGNTDTYERKDAIRDWALAEFQKAYKDDKITKEDIFYYIYGLFHSKEYVNKFKNNL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SKMLPRIPFCKDFWGFSKAGRELASLHLNYETIEIKQSTAKYNTTVSKTEQTALFDEPEY
HHHCCCCCCHHHHCCHHHHHHHHHHEEECEEEEEEECCCCCCCCCCCCCHHHHCCCCCHH
LAESDYKVSKMKFAKNVKIAHKPSTIIYNTKINITNIPAKAYDYVVNGKPALSWIMERYQ
HHCCCCCHHHHHHHHCCEEEECCCEEEEEEEEEEEECCHHHHEEEECCCHHHHHHHHHHE
VKTDDASGITNDPNLYSEDPRYILDLMLKVIEVSVRSVDLINNLPKLEIIEN
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MEREFSHIYVLNLRGNARTQGEERRQEGDGVFDSGSRTPVAITLLIRDDKHKQGDKAKIY
CCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEE
YYDIGDYLSREQKLGYLYQWKDISRVNFTKLEPNRFNDWINPRDESFERYVEIANKDTKF
EEECHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCC
KDGLDIFKVFSMGVVTARDVWAYNFSKDNLLKNIQSCITFYNIERARYAKDKTYNIDMNP
CCCHHHHHHHHCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
KKISWSRKALNYCKKDKKVEFDANKARLCLYRPYSKAWLYYDTAFNEMQYQLDNIYPADT
CCCCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCEEEEEECHHHHHHHHHHCCCCCCC
SVRDASADSASQILGNLSISLNDKGGGEFGALIANQISDLHLFPQTQIFPLYYYEKADPN
CCCCCCCCHHHHHHHCEEEEEECCCCCHHHHHHHHHHHCEEECCCCEEEEEEEEECCCCC
SILDNGNTDTYERKDAIRDWALAEFQKAYKDDKITKEDIFYYIYGLFHSKEYVNKFKNNL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SKMLPRIPFCKDFWGFSKAGRELASLHLNYETIEIKQSTAKYNTTVSKTEQTALFDEPEY
HHHCCCCCCHHHHCCHHHHHHHHHHEEECEEEEEEECCCCCCCCCCCCCHHHHCCCCCHH
LAESDYKVSKMKFAKNVKIAHKPSTIIYNTKINITNIPAKAYDYVVNGKPALSWIMERYQ
HHCCCCCHHHHHHHHCCEEEECCCEEEEEEEEEEEECCHHHHEEEECCCHHHHHHHHHHE
VKTDDASGITNDPNLYSEDPRYILDLMLKVIEVSVRSVDLINNLPKLEIIEN
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA