Click here to switch to the map view.

The map label for this gene is permease fragment 3

Identifier: 109947843

GI number: 109947843

Start: 1151831

End: 1152154

Strand: Reverse

Name: permease fragment 3

Synonym: Hac_1333

Alternate gene names: NA

Gene position: 1152154-1151831 (Counterclockwise)

Preceding gene: 109947845

Following gene: 109947842

Centisome position: 74.14

GC content: 38.58

Gene sequence:

>324_bases
TTGTTAGTGGGGCATTTGATCACGCCTATCTTTTTTATGAGCCATTTTCAAATGTGGCAAGCGTATTTTTTAAATCAAGG
CATCAAAGAGCAATACCTTTTTATGCTTTATACCGCTTTTCAAGTGATTTCTATACCCATTCATTTTTTAAAAGCCTCTA
GTTATAGCCAAAAAATCGCCTTGAGTTTGCTTGCCGTGTTACTGGGCGTTAGCCCCTTCTTGCTTACGAATATCCCTTAT
TTATTCATAGAGGTGTGTGCGCTCATGGTGGCGTTTTTCACTTGCATGAGCTTTGGGGTATCAATTCTCCAAATTTGTTT
CTGA

Upstream 100 bases:

>100_bases
AACTTACCTTATAAAAAAGTTATATACCCTTTCAAAGCTCGTTTTTTAGTATAAATAATCATAACAAATTATAATATCTA
TCAATTCCAGACTCAAAATC

Downstream 100 bases:

>100_bases
AAACAATATTCCATCGCTTTCATCAAGCTGTGTGCGTGTGGTCTCTGTGCTAGTTTTATCCTTAAGCAGTTTGGAGTTGC
GTTACTTTTCGCCCTTGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MLVGHLITPIFFMSHFQMWQAYFLNQGIKEQYLFMLYTAFQVISIPIHFLKASSYSQKIALSLLAVLLGVSPFLLTNIPY
LFIEVCALMVAFFTCMSFGVSILQICF

Sequences:

>Translated_107_residues
MLVGHLITPIFFMSHFQMWQAYFLNQGIKEQYLFMLYTAFQVISIPIHFLKASSYSQKIALSLLAVLLGVSPFLLTNIPY
LFIEVCALMVAFFTCMSFGVSILQICF
>Mature_107_residues
MLVGHLITPIFFMSHFQMWQAYFLNQGIKEQYLFMLYTAFQVISIPIHFLKASSYSQKIALSLLAVLLGVSPFLLTNIPY
LFIEVCALMVAFFTCMSFGVSILQICF

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12261; Mature: 12261

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVGHLITPIFFMSHFQMWQAYFLNQGIKEQYLFMLYTAFQVISIPIHFLKASSYSQKIA
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LSLLAVLLGVSPFLLTNIPYLFIEVCALMVAFFTCMSFGVSILQICF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLVGHLITPIFFMSHFQMWQAYFLNQGIKEQYLFMLYTAFQVISIPIHFLKASSYSQKIA
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LSLLAVLLGVSPFLLTNIPYLFIEVCALMVAFFTCMSFGVSILQICF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA