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The map label for this gene is recR

Identifier: 109947625

GI number: 109947625

Start: 944454

End: 945035

Strand: Reverse

Name: recR

Synonym: Hac_1090

Alternate gene names: 109947625

Gene position: 945035-944454 (Counterclockwise)

Preceding gene: 109947627

Following gene: 109947624

Centisome position: 60.82

GC content: 35.74

Gene sequence:

>582_bases
ATGAATACTTATAAAAATAGCTTGAACCACTTTCTAAATTTAGTGGATTGTTTAGAAAAAATCCCCAATGTGGGTAAAAA
ATCTGCCTTTAAAATGGCGTATCATTTGGGTTTGGAAAACCCATATCTAGCGCTCAAACTCACGCACGCATTAGAAAACG
CCCTAGAAAATCTTAAAACATGCACATCTTGTAATGCACTCAGTGAGAGTGAAATTTGTGAGATTTGCTCTGATGAAAGC
AGGCAAAATTCTCAGCTTTGCATGGTTTTACACCCAAGAGATGTGTTTATTTTAGAAGATTTAAAGGACTTTTTAGGGCG
CTATCATGTGTTAAATTCTATAGAAAATGTGGATTTTAACGCCCTAGAAAAACGCTTGATTAAAGAAAAGATTAAAGAAA
TCATTTTTGCTTTCCCTCCCACTTTAGCTAATGATTCTTTAATGCTCTATATTGAAGATAAATTGCAACATTGCCACCTC
ACTTTCACTAAAATCGCTCAAGGTGTGCCTGCTGGAGTGAATTTTGAAAACATTGACTCAGTCTCCCTTTCAAGGGCGTT
CAATTCAAGGATCAAAGCATGA

Upstream 100 bases:

>100_bases
ATAGTGCATTATAACGCTTTTATCTAAACGCTTCACTAGTTCTTTTCAGTCATAAAAGCCCTTTTAATCTCTTTCAAGTC
AAGTTGGATATACTAACAAA

Downstream 100 bases:

>100_bases
ATTTAAACTTTATGCCCTTATTGCATGCTTATAACCATGCGAGCATTGATTTTCATTTCAATTCTAGCGCAAGGGATTTT
TGCGTGCATGAAGTGCCTTT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKTCTSCNALSESEICEICSDES
RQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNSIENVDFNALEKRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHL
TFTKIAQGVPAGVNFENIDSVSLSRAFNSRIKA

Sequences:

>Translated_193_residues
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKTCTSCNALSESEICEICSDES
RQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNSIENVDFNALEKRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHL
TFTKIAQGVPAGVNFENIDSVSLSRAFNSRIKA
>Mature_193_residues
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKTCTSCNALSESEICEICSDES
RQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNSIENVDFNALEKRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHL
TFTKIAQGVPAGVNFENIDSVSLSRAFNSRIKA

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recR family

Homologues:

Organism=Escherichia coli, GI1786678, Length=190, Percent_Identity=33.6842105263158, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_HELAH (Q17WX2)

Other databases:

- EMBL:   AM260522
- RefSeq:   YP_664853.1
- ProteinModelPortal:   Q17WX2
- SMR:   Q17WX2
- STRING:   Q17WX2
- GeneID:   4177072
- GenomeReviews:   AM260522_GR
- KEGG:   hac:Hac_1090
- NMPDR:   fig|382638.8.peg.1059
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   HACI382638:HAC_1090-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR015967
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21935; Mature: 21935

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKT
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
CTSCNALSESEICEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNSIENVDFN
HHHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
ALEKRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHLTFTKIAQGVPAGVNFENIDS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCH
VSLSRAFNSRIKA
HHHHHHHHHHCCC
>Mature Secondary Structure
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKT
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
CTSCNALSESEICEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYHVLNSIENVDFN
HHHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
ALEKRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHLTFTKIAQGVPAGVNFENIDS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCH
VSLSRAFNSRIKA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA