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The map label for this gene is hpaA

Identifier: 109947366

GI number: 109947366

Start: 702775

End: 703608

Strand: Reverse

Name: hpaA

Synonym: Hac_0810

Alternate gene names: NA

Gene position: 703608-702775 (Counterclockwise)

Preceding gene: 109947369

Following gene: 109947365

Centisome position: 45.28

GC content: 35.49

Gene sequence:

>834_bases
ATGGAGCGTTTATTTTTTTCTCAAAAACTCTGTTTTAAAACGCTAATTATTTTAGGGCTTTCAATCGCATTAATGAGTTG
TGCAAAAAAACCAGTCATTGAAACAACGCCGCAAAACGAGCAAGAAAAACCAATTCAAGTTACTAAAACCATTCAAACCA
CTCAAAAGGTAACGCCAATCAATTTTAACTACCCTGTGCATGTTGCAAAAGCCGCACCAAATCATCGTTTGATTGGTATT
TTAGCACCCAATATTCAAATGAGCGCCAATCTAAAATCTTATAGCGCCTTGTTCCAAAACGCCCTACTTGATCAAATCCA
AAGTATTTTTGAAAAAAGAGGCTATCAAACGCTTTCTTTTAAAGATGAAAACGCTCTAACTTCGCAAGATAAAAAGAAGC
TTTTTGCACTTTTAGATGTGAAAGGGTGGGTAGGCGTTTTAGAAGATCTAAAAATCCATTTAAAAGACCCTAACAAGCCT
AATTCAAACGCTCTCATCAATCAAAGTTCAGGCTCTGTGTTATTTAGTCTTTATGAGCCAGAGAGTTATCGCGTGATTTA
TGATTTTAAGGTAGGGTTGGGGGATTTTCAAGCAATCGTGCAAGCCTATAATAATCTTTCTTTAGGGTTTAATCTTAAAA
ACAATCTTTTCGCCGGTTTAGAAAAGAATAAGCAGGATGCGATACACCAGATTTTAAACAAAATCTACGCTTTAATCATG
AAAAAAGCCATAACAGAATTGACAGAAAAAAATATTTCTGCATACAAAGAGGCGATTGATAAGATGAAAGGTTTCAAAAC
CCCTACCCCTAAAAAACGAGCTTTGGATGAGTGA

Upstream 100 bases:

>100_bases
AAATTAGACAAAAAAGAAAATTGTAGCGCAAATTGATGCCCTCAAATCCGCATGCGTTAAAGTATAATCAACGAAATATT
TTAATCTTTGGGAGAGTGTT

Downstream 100 bases:

>100_bases
TTGAAAAATTTGTTTTAAAATCAGTCTTTTTTAAGGATTTTTTAAGTACAATGCTAAATTTATTTTAATATTTAAGGATA
CACAATGGCAAGAAGGTGCA

Product: neuraminyllactose-binding hemagglutinin precursor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MERLFFSQKLCFKTLIILGLSIALMSCAKKPVIETTPQNEQEKPIQVTKTIQTTQKVTPINFNYPVHVAKAAPNHRLIGI
LAPNIQMSANLKSYSALFQNALLDQIQSIFEKRGYQTLSFKDENALTSQDKKKLFALLDVKGWVGVLEDLKIHLKDPNKP
NSNALINQSSGSVLFSLYEPESYRVIYDFKVGLGDFQAIVQAYNNLSLGFNLKNNLFAGLEKNKQDAIHQILNKIYALIM
KKAITELTEKNISAYKEAIDKMKGFKTPTPKKRALDE

Sequences:

>Translated_277_residues
MERLFFSQKLCFKTLIILGLSIALMSCAKKPVIETTPQNEQEKPIQVTKTIQTTQKVTPINFNYPVHVAKAAPNHRLIGI
LAPNIQMSANLKSYSALFQNALLDQIQSIFEKRGYQTLSFKDENALTSQDKKKLFALLDVKGWVGVLEDLKIHLKDPNKP
NSNALINQSSGSVLFSLYEPESYRVIYDFKVGLGDFQAIVQAYNNLSLGFNLKNNLFAGLEKNKQDAIHQILNKIYALIM
KKAITELTEKNISAYKEAIDKMKGFKTPTPKKRALDE
>Mature_277_residues
MERLFFSQKLCFKTLIILGLSIALMSCAKKPVIETTPQNEQEKPIQVTKTIQTTQKVTPINFNYPVHVAKAAPNHRLIGI
LAPNIQMSANLKSYSALFQNALLDQIQSIFEKRGYQTLSFKDENALTSQDKKKLFALLDVKGWVGVLEDLKIHLKDPNKP
NSNALINQSSGSVLFSLYEPESYRVIYDFKVGLGDFQAIVQAYNNLSLGFNLKNNLFAGLEKNKQDAIHQILNKIYALIM
KKAITELTEKNISAYKEAIDKMKGFKTPTPKKRALDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31269; Mature: 31269

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLFFSQKLCFKTLIILGLSIALMSCAKKPVIETTPQNEQEKPIQVTKTIQTTQKVTPI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
NFNYPVHVAKAAPNHRLIGILAPNIQMSANLKSYSALFQNALLDQIQSIFEKRGYQTLSF
CCCCCEEEEECCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
KDENALTSQDKKKLFALLDVKGWVGVLEDLKIHLKDPNKPNSNALINQSSGSVLFSLYEP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEECCCCCEEEEEECC
ESYRVIYDFKVGLGDFQAIVQAYNNLSLGFNLKNNLFAGLEKNKQDAIHQILNKIYALIM
CCEEEEEEEECCCHHHHHHHHHHCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHH
KKAITELTEKNISAYKEAIDKMKGFKTPTPKKRALDE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MERLFFSQKLCFKTLIILGLSIALMSCAKKPVIETTPQNEQEKPIQVTKTIQTTQKVTPI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
NFNYPVHVAKAAPNHRLIGILAPNIQMSANLKSYSALFQNALLDQIQSIFEKRGYQTLSF
CCCCCEEEEECCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
KDENALTSQDKKKLFALLDVKGWVGVLEDLKIHLKDPNKPNSNALINQSSGSVLFSLYEP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEECCCCCEEEEEECC
ESYRVIYDFKVGLGDFQAIVQAYNNLSLGFNLKNNLFAGLEKNKQDAIHQILNKIYALIM
CCEEEEEEEECCCHHHHHHHHHHCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHH
KKAITELTEKNISAYKEAIDKMKGFKTPTPKKRALDE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA