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The map label for this gene is rpmB

Identifier: 109947365

GI number: 109947365

Start: 702502

End: 702690

Strand: Reverse

Name: rpmB

Synonym: Hac_0809

Alternate gene names: 109947365

Gene position: 702690-702502 (Counterclockwise)

Preceding gene: 109947366

Following gene: 109947364

Centisome position: 45.22

GC content: 42.86

Gene sequence:

>189_bases
ATGGCAAGAAGGTGCACTTTAACTTTCAAAGGGTCTATGATAGGCAATCATGTAAGTCATGCAAACAATAAAAACAAGCG
TCGCTTACTCCCTAATTTACGCTCTATTAAGATCCAATTAGACGACGGCACGACTAGACGCATTAAGGTGGCTGCTTCCA
CTTTAAGGACCATGCGTAAAGGGGCTTAG

Upstream 100 bases:

>100_bases
AGCTTTGGATGAGTGATTGAAAAATTTGTTTTAAAATCAGTCTTTTTTAAGGATTTTTTAAGTACAATGCTAAATTTATT
TTAATATTTAAGGATACACA

Downstream 100 bases:

>100_bases
CCGCTTAGGGTTTTATAACGAATTTTAAAACCCCTTGAATTGGAACTTCTTTTTAAATATCAATCCGGCTTATTTAGGCT
TGGTTTTGAATGATATTTTA

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MARRCTLTFKGSMIGNHVSHANNKNKRRLLPNLRSIKIQLDDGTTRRIKVAASTLRTMRKGA

Sequences:

>Translated_62_residues
MARRCTLTFKGSMIGNHVSHANNKNKRRLLPNLRSIKIQLDDGTTRRIKVAASTLRTMRKGA
>Mature_61_residues
ARRCTLTFKGSMIGNHVSHANNKNKRRLLPNLRSIKIQLDDGTTRRIKVAASTLRTMRKGA

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_HELAH (Q17XN2)

Other databases:

- EMBL:   AM260522
- RefSeq:   YP_664593.1
- ProteinModelPortal:   Q17XN2
- SMR:   Q17XN2
- STRING:   Q17XN2
- GeneID:   4176857
- GenomeReviews:   AM260522_GR
- KEGG:   hac:Hac_0809
- NMPDR:   fig|382638.8.peg.785
- eggNOG:   COG0227
- HOGENOM:   HBG597003
- OMA:   RCAITGK
- ProtClustDB:   PRK00359
- BioCyc:   HACI382638:HAC_0809-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 7005; Mature: 6874

Theoretical pI: Translated: 12.61; Mature: 12.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRCTLTFKGSMIGNHVSHANNKNKRRLLPNLRSIKIQLDDGTTRRIKVAASTLRTMRK
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHC
GA
CC
>Mature Secondary Structure 
ARRCTLTFKGSMIGNHVSHANNKNKRRLLPNLRSIKIQLDDGTTRRIKVAASTLRTMRK
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHC
GA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA