| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947344
Identifier: 109947344
GI number: 109947344
Start: 677621
End: 678868
Strand: Reverse
Name: 109947344
Synonym: Hac_0783
Alternate gene names: NA
Gene position: 678868-677621 (Counterclockwise)
Preceding gene: 109947346
Following gene: 109947343
Centisome position: 43.69
GC content: 38.78
Gene sequence:
>1248_bases GTGGCAAACACCTTTTTAAAACATGCTTTTTTAGTCGGTTCGCTAGTGGCTAATTCTCACGCTTTTGATTGGAATATTTT TAAATACAATCTGGGTTTTAACATGTTTATCATGGATCATGAAGGTTCAACGCCCTATTGGATCAACACTAACACCAACC TTAAAAGCCGTTTGACCCCAGAGTTTGGGATCCAATTTCACACCAAAAAAATAGAGCAAAGCCTGATTGTGGGGGCGTAT TTCTTTCAAAATTTCCATAATTACAATACCAATTTTCCCTACGCTTGGGGGCCTACGATGTATTACAAGGCTAGAGGGGA TCGTTTCACCTTTTATGGCGGGATTTTCCCTAGAAAAAACCTTTTAGGAAGCTATGGTTTGAATGTTTTCGCCCCTTATT ATTGGTTTATAGATCCGAACGCTAGAGGGTTTTTATTGCAATTTCAAAACCATTATTCACCCCTAAAACCCTATTATGGG CATGCGGAATTCATGCTGGATTGGTTTGGGGGGAATTGTTACAACACTTGCAAATTCGGGAGAAACCCTTATGGGAATGC AATGGACAGATTTCAAATGAACGGCTCTGTTGGTTATAACTTTTTTAAGGATTTCTTGATTTTGGGAGGGAATTTTGTCT TGTTTCATAATGAAGACAAATACCTTTTAAATGGCGCTGACGGCATGCATTTTAATGAAAAAAAAGCCATTGATAACAGT GCGATTTATTTGTTAGATCGCCTTTATTACAACGCTTACATAGGGACAAGCCTTTTAGACATCGCCCCTTTTATGGAAAA ACTCAACGCCAGATTTGGCATGGTTTCTGAAGCGAGCCGATTGAGAAATAGAGAAAAAGATGTGCCCTTTATCAATAGCG TTGGGGGGCAATTTGATATAGAGCTCCAATACAAAGGCTTTGGTATCCACAATTTATTTTATTTTGCAAAAACCCCTGAA ATGCCTTTTTACAACCAATACCAGTATGTGAGTATGTATTGCACGCCCTCTTATTGCCCCACGCCCATTTATCGTGGCGT GCCCTTTTTTCAAGCGAACATGTATAATCGTTTTGATTTGTATTATAATTGGAAAAACGACTTCGCGTCCGTTCGGGTCA ACTTCGTGTTAAATTCTATGCATGAGGGTTTTAAAAGCCATTCGCCTTGGATGGAATCTTACCAAGTGTATATGACGGTT GCCTTTGATCCTTACAACCTTATCAATAAAATCGCTAGAAAAAAATAA
Upstream 100 bases:
>100_bases GCGCTAAAATAACCCATTTTCTAAAAACATGCGCTAAAATAACCCATTCTCTAAAAAATAAACCTTTTGATTGAAAACGA TATATGGTATGAGGTAACAA
Downstream 100 bases:
>100_bases AAATTCTTGACAATAAGTTAATCCCTTTTATATAATATCGTCTCATTTGTAGCCATTGCTTGAGCAATGATTTTAAGCTA TAGAAAAGAGGTGATAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MANTFLKHAFLVGSLVANSHAFDWNIFKYNLGFNMFIMDHEGSTPYWINTNTNLKSRLTPEFGIQFHTKKIEQSLIVGAY FFQNFHNYNTNFPYAWGPTMYYKARGDRFTFYGGIFPRKNLLGSYGLNVFAPYYWFIDPNARGFLLQFQNHYSPLKPYYG HAEFMLDWFGGNCYNTCKFGRNPYGNAMDRFQMNGSVGYNFFKDFLILGGNFVLFHNEDKYLLNGADGMHFNEKKAIDNS AIYLLDRLYYNAYIGTSLLDIAPFMEKLNARFGMVSEASRLRNREKDVPFINSVGGQFDIELQYKGFGIHNLFYFAKTPE MPFYNQYQYVSMYCTPSYCPTPIYRGVPFFQANMYNRFDLYYNWKNDFASVRVNFVLNSMHEGFKSHSPWMESYQVYMTV AFDPYNLINKIARKK
Sequences:
>Translated_415_residues MANTFLKHAFLVGSLVANSHAFDWNIFKYNLGFNMFIMDHEGSTPYWINTNTNLKSRLTPEFGIQFHTKKIEQSLIVGAY FFQNFHNYNTNFPYAWGPTMYYKARGDRFTFYGGIFPRKNLLGSYGLNVFAPYYWFIDPNARGFLLQFQNHYSPLKPYYG HAEFMLDWFGGNCYNTCKFGRNPYGNAMDRFQMNGSVGYNFFKDFLILGGNFVLFHNEDKYLLNGADGMHFNEKKAIDNS AIYLLDRLYYNAYIGTSLLDIAPFMEKLNARFGMVSEASRLRNREKDVPFINSVGGQFDIELQYKGFGIHNLFYFAKTPE MPFYNQYQYVSMYCTPSYCPTPIYRGVPFFQANMYNRFDLYYNWKNDFASVRVNFVLNSMHEGFKSHSPWMESYQVYMTV AFDPYNLINKIARKK >Mature_414_residues ANTFLKHAFLVGSLVANSHAFDWNIFKYNLGFNMFIMDHEGSTPYWINTNTNLKSRLTPEFGIQFHTKKIEQSLIVGAYF FQNFHNYNTNFPYAWGPTMYYKARGDRFTFYGGIFPRKNLLGSYGLNVFAPYYWFIDPNARGFLLQFQNHYSPLKPYYGH AEFMLDWFGGNCYNTCKFGRNPYGNAMDRFQMNGSVGYNFFKDFLILGGNFVLFHNEDKYLLNGADGMHFNEKKAIDNSA IYLLDRLYYNAYIGTSLLDIAPFMEKLNARFGMVSEASRLRNREKDVPFINSVGGQFDIELQYKGFGIHNLFYFAKTPEM PFYNQYQYVSMYCTPSYCPTPIYRGVPFFQANMYNRFDLYYNWKNDFASVRVNFVLNSMHEGFKSHSPWMESYQVYMTVA FDPYNLINKIARKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48847; Mature: 48716
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTFLKHAFLVGSLVANSHAFDWNIFKYNLGFNMFIMDHEGSTPYWINTNTNLKSRLTP CCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEECCCCCCEEEECCCCCHHCCCH EFGIQFHTKKIEQSLIVGAYFFQNFHNYNTNFPYAWGPTMYYKARGDRFTFYGGIFPRKN HHCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCHH LLGSYGLNVFAPYYWFIDPNARGFLLQFQNHYSPLKPYYGHAEFMLDWFGGNCYNTCKFG HHHHCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEHHCCC RNPYGNAMDRFQMNGSVGYNFFKDFLILGGNFVLFHNEDKYLLNGADGMHFNEKKAIDNS CCCCCCCHHHEEECCCCCHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCHHHCCCCC AIYLLDRLYYNAYIGTSLLDIAPFMEKLNARFGMVSEASRLRNREKDVPFINSVGGQFDI HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCCEEEE ELQYKGFGIHNLFYFAKTPEMPFYNQYQYVSMYCTPSYCPTPIYRGVPFFQANMYNRFDL EEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHCCCCEEECCCCEEEEE YYNWKNDFASVRVNFVLNSMHEGFKSHSPWMESYQVYMTVAFDPYNLINKIARKK EEECCCCCEEEEEEEEHHHHHHHHHCCCCCCCCEEEEEEEEECHHHHHHHHHHCC >Mature Secondary Structure ANTFLKHAFLVGSLVANSHAFDWNIFKYNLGFNMFIMDHEGSTPYWINTNTNLKSRLTP CCHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEECCCCCCEEEECCCCCHHCCCH EFGIQFHTKKIEQSLIVGAYFFQNFHNYNTNFPYAWGPTMYYKARGDRFTFYGGIFPRKN HHCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCHH LLGSYGLNVFAPYYWFIDPNARGFLLQFQNHYSPLKPYYGHAEFMLDWFGGNCYNTCKFG HHHHCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEHHCCC RNPYGNAMDRFQMNGSVGYNFFKDFLILGGNFVLFHNEDKYLLNGADGMHFNEKKAIDNS CCCCCCCHHHEEECCCCCHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCHHHCCCCC AIYLLDRLYYNAYIGTSLLDIAPFMEKLNARFGMVSEASRLRNREKDVPFINSVGGQFDI HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCCEEEE ELQYKGFGIHNLFYFAKTPEMPFYNQYQYVSMYCTPSYCPTPIYRGVPFFQANMYNRFDL EEEEECCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHCCCCEEECCCCEEEEE YYNWKNDFASVRVNFVLNSMHEGFKSHSPWMESYQVYMTVAFDPYNLINKIARKK EEECCCCCEEEEEEEEHHHHHHHHHCCCCCCCCEEEEEEEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA