| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947288
Identifier: 109947288
GI number: 109947288
Start: 628089
End: 629099
Strand: Reverse
Name: 109947288
Synonym: Hac_0715
Alternate gene names: NA
Gene position: 629099-628089 (Counterclockwise)
Preceding gene: 109947301
Following gene: 109947282
Centisome position: 40.48
GC content: 35.31
Gene sequence:
>1011_bases GTGCGTTCGTTTGGAAACTACATGCAAGAGTGGCTTTATAGCGAAAAAGGGTATTATAGAAAGGCTGTAATCGGTCAAAA AGGGGATTTTTACACTTCGGTGTCTTTGAGCAAGTTTTTTGGGGGTGCTATTGCGTTTTATATTATCAAGCTTTTAGAAA AAGAAAAATTATTTTTGCCTTTAAAAATTGTAGAAATTGGCTCTCATCATGGGCATTTTTTGAGCGATATAGCCAATTTT TTAAAAGCTTTAAGCGTGGGCGTGATAGAAAAATGCGAGTTTGTAAGCTGTGAGCCTTTAATAGAATTACAAAATATCCA ACAAATCACTTTTAAACAAGCCACGCAATTAGATTTAATCGGTTGCGATTTAAAAGAGCTTGATTTTAAAGAAAATGAAA GCGCGTTTGTTGTCTCTAATGAATTGTTTGATGCGTTTGCTTGCGAGATTATCAAAGATAACCAAATGCTTTTTATCACC CATGATCATCAAAGTGTTTGGAGCCATGTTGATGAGCCTACTAAAGAACTTCTAAAAACATTGAATTTAAAAGAAGGGTG TGCACCCTTGTTTTTGAACGCTTTTATCAAGGATTTGTTAGAAAAGTTGGATAAGGCTTCTTCTTGGGTGTTTTTAAGCT TTGATTATGGCGATACAATAGAGAGAAAAGACATGCATTTAAGGGCTTTTAAAAACCATCAAGTGCTGGATTTCAAGGAT ATTTTAAACCATTTAGCTTCTTTGTATCAACAAAGCGACTTGACTTATGATGTCAATTTTTCTTTGGTGCGCTCTTTGTT TGAAAAACACCACGCAGAATTTTCATTCTTTAAATCGCAGGCTAACGCTTTGCTTGATATGGGGCTTATGGAATTGTTAG AGACATTTTCAAAAAGCGTGAGTTATGAAAGGTATTTAAAAGAAGCCGCTAAAATCAAACCCTTGATTAGCCCCGGAGGT TTAGGGGAGCGTTTCAAGGCGTTAGAGTTTGTGAAAAAGAGTGAAATATAA
Upstream 100 bases:
>100_bases AAATCATCATTATTCAATATCATAGCGCAAAAATAAGGCAATTTTGACTAGAATGGTGGTCTCTTATTTTGATTGAGATG AGTTTAATAGAAGGAAAATC
Downstream 100 bases:
>100_bases AAACAATCAAAAAGCGATAAAAAGCGTGTTTTAATGCTTTCTAATGTGTGTAGCGATGAGATAAACGCTCACCACTCTTT TATAATCCAATTTATCCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MRSFGNYMQEWLYSEKGYYRKAVIGQKGDFYTSVSLSKFFGGAIAFYIIKLLEKEKLFLPLKIVEIGSHHGHFLSDIANF LKALSVGVIEKCEFVSCEPLIELQNIQQITFKQATQLDLIGCDLKELDFKENESAFVVSNELFDAFACEIIKDNQMLFIT HDHQSVWSHVDEPTKELLKTLNLKEGCAPLFLNAFIKDLLEKLDKASSWVFLSFDYGDTIERKDMHLRAFKNHQVLDFKD ILNHLASLYQQSDLTYDVNFSLVRSLFEKHHAEFSFFKSQANALLDMGLMELLETFSKSVSYERYLKEAAKIKPLISPGG LGERFKALEFVKKSEI
Sequences:
>Translated_336_residues MRSFGNYMQEWLYSEKGYYRKAVIGQKGDFYTSVSLSKFFGGAIAFYIIKLLEKEKLFLPLKIVEIGSHHGHFLSDIANF LKALSVGVIEKCEFVSCEPLIELQNIQQITFKQATQLDLIGCDLKELDFKENESAFVVSNELFDAFACEIIKDNQMLFIT HDHQSVWSHVDEPTKELLKTLNLKEGCAPLFLNAFIKDLLEKLDKASSWVFLSFDYGDTIERKDMHLRAFKNHQVLDFKD ILNHLASLYQQSDLTYDVNFSLVRSLFEKHHAEFSFFKSQANALLDMGLMELLETFSKSVSYERYLKEAAKIKPLISPGG LGERFKALEFVKKSEI >Mature_336_residues MRSFGNYMQEWLYSEKGYYRKAVIGQKGDFYTSVSLSKFFGGAIAFYIIKLLEKEKLFLPLKIVEIGSHHGHFLSDIANF LKALSVGVIEKCEFVSCEPLIELQNIQQITFKQATQLDLIGCDLKELDFKENESAFVVSNELFDAFACEIIKDNQMLFIT HDHQSVWSHVDEPTKELLKTLNLKEGCAPLFLNAFIKDLLEKLDKASSWVFLSFDYGDTIERKDMHLRAFKNHQVLDFKD ILNHLASLYQQSDLTYDVNFSLVRSLFEKHHAEFSFFKSQANALLDMGLMELLETFSKSVSYERYLKEAAKIKPLISPGG LGERFKALEFVKKSEI
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38716; Mature: 38716
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFGNYMQEWLYSEKGYYRKAVIGQKGDFYTSVSLSKFFGGAIAFYIIKLLEKEKLFLP CCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEE LKIVEIGSHHGHFLSDIANFLKALSVGVIEKCEFVSCEPLIELQNIQQITFKQATQLDLI EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEE GCDLKELDFKENESAFVVSNELFDAFACEIIKDNQMLFITHDHQSVWSHVDEPTKELLKT CCCHHHCCCCCCCCEEEEEHHHHHHHHHHHEECCCEEEEECCHHHHHHHCCHHHHHHHHH LNLKEGCAPLFLNAFIKDLLEKLDKASSWVFLSFDYGDTIERKDMHLRAFKNHQVLDFKD CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHH ILNHLASLYQQSDLTYDVNFSLVRSLFEKHHAEFSFFKSQANALLDMGLMELLETFSKSV HHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SYERYLKEAAKIKPLISPGGLGERFKALEFVKKSEI CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRSFGNYMQEWLYSEKGYYRKAVIGQKGDFYTSVSLSKFFGGAIAFYIIKLLEKEKLFLP CCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEE LKIVEIGSHHGHFLSDIANFLKALSVGVIEKCEFVSCEPLIELQNIQQITFKQATQLDLI EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEE GCDLKELDFKENESAFVVSNELFDAFACEIIKDNQMLFITHDHQSVWSHVDEPTKELLKT CCCHHHCCCCCCCCEEEEEHHHHHHHHHHHEECCCEEEEECCHHHHHHHCCHHHHHHHHH LNLKEGCAPLFLNAFIKDLLEKLDKASSWVFLSFDYGDTIERKDMHLRAFKNHQVLDFKD CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHH ILNHLASLYQQSDLTYDVNFSLVRSLFEKHHAEFSFFKSQANALLDMGLMELLETFSKSV HHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SYERYLKEAAKIKPLISPGGLGERFKALEFVKKSEI CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA