| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is fucT fragment 3
Identifier: 109947079
GI number: 109947079
Start: 424990
End: 426219
Strand: Reverse
Name: fucT fragment 3
Synonym: Hac_0481
Alternate gene names: NA
Gene position: 426219-424990 (Counterclockwise)
Preceding gene: 109947080
Following gene: 109947078
Centisome position: 27.43
GC content: 36.26
Gene sequence:
>1230_bases ATGACACCACTTGCGCCCTACACTCTTAAATCTGATAGCCTTTATGCTTTAAAAAAGCCTGCCCATCGTTTTAAAGAAGA CCACCCTAAATTATGCTCTGTAGTGAAAGGCGAGAGTGACCCTTTTAAAAGAGGGTTTGCAAGTTTTGTGGCGGGTAACG CTAACGCCCCTATGAGGAACGCTTTCTGTGAGGCTTTAAATTCTGTTGAGCCAGTTACTGGGGGAGGAGCAGTGAAAAAC ACTCTAGGCTATAATGTCACAAACAAGAGCGAGTTTTTAAGCCAATACAAGTTCAATCTCTGTTTTGAAAACGCTCAAGG CTATGGCTATGTGACTGAAAAAATCATTGACGCTTACTTTAGCCACACTATCCCTATTTATTGGGGGAGTCCTAGCGTGG CGCAAGACTTTAACCCTAAAAGTTTTGTGAATGTGCATGATTTTAAAGATTTTGATGGAGCGATTGATTATATAAGATAC TTGCACACCCACGAAAACGCGTATTTAGACATGCTTTATGAAAACCCTTTAAATGTGATTGATGGGAAAGCTTGTTTTTA CCAAGATTTGAGTTTTAAAAAAATCTTAGATTTTTTTAAAACGATTTTAGAAAATGACACGATTTACCACAATAACCCTT TTGTTTTTGATCGCGATTTGCATGAGCCATTAGTGTCAATTGATAATTTGAGAGCGGATTTATTGCTGCTAAAGGATAAT TATGATGGTTTGAAAACAGACTATGATGGTTTGAAAACAGACTATGATGGTTTGAAAACAGACTATGATGGTTTGAAAAC AGACTATGATGGTTTGAAAACAGACTATGATGGTTTGAAAACAGACTATGATGGTTTGAAAACAGACTATGATGGTTTGA AAACAGACTATGATGGTTTGAAAACAGACTATGATGGTTTGAAAACAGACTATGATGGTTTGAAAACAGACTATGATGGT TTGAAAACAGACTATGATGGTTTGAAAACAGACTATGATGGTTTGAAAACAGACTATGATGGTTTGAAAACAGACTATGA TGGTTTGAAAACAGACTATGATGGTTTGAAAACAGACTATGATGGTTTGAAAACAGACTATGACCATCTCTTCAAGAGTG CCTTACCTTTATTGGAATTGTCTCAAACCACCTCTTTTAAAATCTATCACAAAATCTACCAAAAAACCTTACCCTTACTG TGCATGGCAAGAAAGTTAGTTAAAAAGTAA
Upstream 100 bases:
>100_bases TTTGATTACGCCATAGGCTTTGATGGATTGGATTTTAAAGAGCGTTATTTAAGGATGCCTTTATATTATGCCCATTTGCA TGATAAGGCTCAAAGCGTGA
Downstream 100 bases:
>100_bases ATTTATTTTATAATTTATTTTATAACATCAGTTATTAACTCAAAACAAAGGATAGCCGCATGCAAAATGGTCAAACCACC CTAAAAAATGTCTTTTTAGA
Product: alpha (1,3)-fucosyltransferase fragment 3
Products: NA
Alternate protein names: Alpha-1 3-Fucosyltransferase; Fucosyltransferase; Alpha1 3-Fucosyltransferase; LPS Biosynthesis Related Glycosyltransferase; 2 Domain Protein; Alpha1 3-Fucosyl Transferase; Cell Surface Protein; Alpha 1 3-Fucosyltransferase; Transglutaminase Domain-Containing Protein; Glycosyl Transferase
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MTPLAPYTLKSDSLYALKKPAHRFKEDHPKLCSVVKGESDPFKRGFASFVAGNANAPMRNAFCEALNSVEPVTGGGAVKN TLGYNVTNKSEFLSQYKFNLCFENAQGYGYVTEKIIDAYFSHTIPIYWGSPSVAQDFNPKSFVNVHDFKDFDGAIDYIRY LHTHENAYLDMLYENPLNVIDGKACFYQDLSFKKILDFFKTILENDTIYHNNPFVFDRDLHEPLVSIDNLRADLLLLKDN YDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDG LKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDHLFKSALPLLELSQTTSFKIYHKIYQKTLPLL CMARKLVKK
Sequences:
>Translated_409_residues MTPLAPYTLKSDSLYALKKPAHRFKEDHPKLCSVVKGESDPFKRGFASFVAGNANAPMRNAFCEALNSVEPVTGGGAVKN TLGYNVTNKSEFLSQYKFNLCFENAQGYGYVTEKIIDAYFSHTIPIYWGSPSVAQDFNPKSFVNVHDFKDFDGAIDYIRY LHTHENAYLDMLYENPLNVIDGKACFYQDLSFKKILDFFKTILENDTIYHNNPFVFDRDLHEPLVSIDNLRADLLLLKDN YDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDG LKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDHLFKSALPLLELSQTTSFKIYHKIYQKTLPLL CMARKLVKK >Mature_408_residues TPLAPYTLKSDSLYALKKPAHRFKEDHPKLCSVVKGESDPFKRGFASFVAGNANAPMRNAFCEALNSVEPVTGGGAVKNT LGYNVTNKSEFLSQYKFNLCFENAQGYGYVTEKIIDAYFSHTIPIYWGSPSVAQDFNPKSFVNVHDFKDFDGAIDYIRYL HTHENAYLDMLYENPLNVIDGKACFYQDLSFKKILDFFKTILENDTIYHNNPFVFDRDLHEPLVSIDNLRADLLLLKDNY DGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGL KTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDHLFKSALPLLELSQTTSFKIYHKIYQKTLPLLC MARKLVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46704; Mature: 46572
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLAPYTLKSDSLYALKKPAHRFKEDHPKLCSVVKGESDPFKRGFASFVAGNANAPMRN CCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH AFCEALNSVEPVTGGGAVKNTLGYNVTNKSEFLSQYKFNLCFENAQGYGYVTEKIIDAYF HHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHH SHTIPIYWGSPSVAQDFNPKSFVNVHDFKDFDGAIDYIRYLHTHENAYLDMLYENPLNVI HCCEEEEECCCCHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHCCCCCCC DGKACFYQDLSFKKILDFFKTILENDTIYHNNPFVFDRDLHEPLVSIDNLRADLLLLKDN CCCHHHHHCCCHHHHHHHHHHHHCCCCEECCCCEEECCHHHHHHHHHHCCCEEEEEEECC YDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGLKTDYDHLFKSALPLLELSQTTSFKIYHKIYQKTLPLLCMARKLVKK CCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPLAPYTLKSDSLYALKKPAHRFKEDHPKLCSVVKGESDPFKRGFASFVAGNANAPMRN CCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH AFCEALNSVEPVTGGGAVKNTLGYNVTNKSEFLSQYKFNLCFENAQGYGYVTEKIIDAYF HHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHH SHTIPIYWGSPSVAQDFNPKSFVNVHDFKDFDGAIDYIRYLHTHENAYLDMLYENPLNVI HCCEEEEECCCCHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHCCCCCCC DGKACFYQDLSFKKILDFFKTILENDTIYHNNPFVFDRDLHEPLVSIDNLRADLLLLKDN CCCHHHHHCCCHHHHHHHHHHHHCCCCEECCCCEEECCHHHHHHHHHHCCCEEEEEEECC YDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDYDGLKTDY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGLKTDYDHLFKSALPLLELSQTTSFKIYHKIYQKTLPLLCMARKLVKK CCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA