| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is cheA [H]
Identifier: 109947052
GI number: 109947052
Start: 395383
End: 397806
Strand: Reverse
Name: cheA [H]
Synonym: Hac_0450
Alternate gene names: 109947052
Gene position: 397806-395383 (Counterclockwise)
Preceding gene: 109947053
Following gene: 109947051
Centisome position: 25.6
GC content: 41.54
Gene sequence:
>2424_bases ATGGATGATTTGCAAGAAATAATGGAAGACTTCTTGATTGAAGCCTTTGAAATGAATGAGCAGTTGGATCAGGATTTAGT GGAATTAGAGCATAATCCTGAAGATTTGGAATTACTCAATCGCATTTTTAGAGTCGCCCACACCATTAAAGGCTCTAGCT CGTTTTTGAATCTTAACATTCTCACGCACCTCACGCACAACATGGAAGATGTCTTAAATCGTGCCAGAAAAGGCGAGATC AAGATCACGCCTGATATTATGGATGTCGTGTTGCGCTCCATTGATTTGATGAAAACTTTGCTCGTAACGATTAGAGATAC CGGCTCTGATAACAATAACGGCAAGGAAAATGAGATTGAAGAAGTGGTCAAACAACTTCAAGCCATTACAAGCCAAAATG CAGAGAGCGCTCAGGAAACTTTAGGAACTAAAGAAGCCCCCCAACAAGAAAATAAAGAAGAAATTAAAAAAGAAGCTCAA CAAGAAACCAAAGAAAATAAAACCCCTACCACACAAAACCCCACAAGCGATAACCCATTAGCGGATGAGCCGGATTTGGA TTACGCTAACATGAGCGCTGAAGAAGTGGAAGCCGAAATTGAACGGTTGCTTAACAAACGCCAAGAGGCCGATAAAGAAC GAAGAGCCCAAAAAAAACAAGCTAACCCCAAACAAGAAGTTACACCAGCAAAAGAACCCCAAAAAACAGAAACTCCCAAA GCCCCTAAAACAGAAACTAAAGCCAAGGTTAAAACAGATAGAGAAGAAAATAAAGCCCCCTCTATTGGCGTGGAGCAAAC CGTTAGGGTGGATGTGCGCCGATTAGATCATTTGATGAATCTAATTGGTGAGCTTGTTTTAGGTAAAAACCGCTTGATTA GGATTTATAGCGATGTGGAAGAGCGGTATGATGGGGAGAAATTTTTAGAGGAATTAAACCAGGTGGTTTCTTCTATTTCA GCAGTAACGACAGACTTGCAGCTTGCAGTGATGAAAACACGAATGCAACCGGTGGGTAAGGTGTTTAACAAATTCCCTCG CATGGTAAGGGATTTGAGCCGAGAGTTAGGCAAGAGCATTGAATTAATCATTGAAGGCGAAGAAACCGAATTGGACAAAT CTATTGTGGAAGAAATTGGCGATCCGCTCATTCATATTATCCGCAACTCATGCGATCATGGGATCGAGCCTTTGGAAGAA AGAAAAAGGCTTAACAAACCTGAAACCGGTAAAGTGCAATTGAGCGCGTATAATGAGGGTAACCACATTGTGATTAAAAT CTCTGATGATGGTAAGGGGTTAGATCCTGCAATGCTTAAAGAAAAAGCGGTTGAAAAAGGGGTGATTAGCGAAAGAGATG CTGAAAGCATGAGCGATAGGGAAGCGTTTAACCTTATTTTCAAGCCAGGCTTTTCTACCGCAAAAGCCGTTTCTAATGTT TCAGGCAGAGGCGTGGGCATGGATGTGGTGAAAACCAATATTGAAAAGCTTAATGGGATCATTGAAATTGATTCAGAAGT GGGGGTAGGCACGACTCAAAAGCTTAAAATCCCTCTCACTCTAGCTATCATTCAAGCTTTACTCGTGGGCGTTCAAGAAG AATATTACGCTATCCCACTTTCTTCAGTTTTAGAAACCGTGCGCATCATTCAGGATGAAATTTACACCGTTGATGGCAAG AGTGTGTTGCGCTTAAGAAATGAGGTGCTTTCTTTGGTGCGCCTTTCTGATATTTTTAAAGTGGATGCTATTTTTGAATC CAGTGCTGATGTGTATGTGGTCATCATTGGCTTGGCTGATCAAAAAATTGGCGTGATCGTGGATTATTTGATCGGTCAAG AAGAAGTGGTCATCAAATCTTTAGGCTATTATCTTAAAAACACCAAAGGTATTGCCGGTGCTACGGTGAGAGGTGATGGG AAAATCACTCTCATTGTAGATGTAGGGGCGATGATGGATATGGCAAAAAGCATCAAAGTCAATATCACTAATTTGATGAA TGAATCAGAAAACACGAAAAACAAAAATTCTCCTAGCGACTATGTCGTCTTAGCGATTGATGACAGCAGCACGGACAGAG CGATTATCCGCAAATGTTTAAAACCATTAGGTATCACGCTTTTAGAGGCCACCAATGGGTTAGAGGGATTAGAAATGCTT AAAAGTGGCGATAAGATTCCGGACGCTATTTTAGTGGATATTGAGATGCCCAAAATGGATGGCTACACTTTCGCTTCTGA AGTGCGCAAATACAATAAATTCAAAAACTTGCCTTTGATTGCGGTCACTAGTCGGGTGACTAAAACCGACAGGATGCGTG GCGTTGAATCGGGCATGACTGAATACATCACTAAACCTTATAGCGGTGAGTATTTAGCGAGCGTAGTGAAGCGCAGCATT AAATTAGAAGGAGGCCAATCATGA
Upstream 100 bases:
>100_bases AAATTCACCGAAGAAATTTCTAAGATTTTAGACAAGAATGCGTAATTCTTTTTATAAAATTGTAGAATACTCTTATCTCA AACGCTAAAAGGGGTTTTAA
Downstream 100 bases:
>100_bases GCGATCCATTGAAAGATTTATTTGAAAAACAAAAAGAAGCCAACACCAACCCCAAGCAAGAAGATAATGAAGAAGTCTTG CAATTCATTGGCTTTATTAT
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MDDLQEIMEDFLIEAFEMNEQLDQDLVELEHNPEDLELLNRIFRVAHTIKGSSSFLNLNILTHLTHNMEDVLNRARKGEI KITPDIMDVVLRSIDLMKTLLVTIRDTGSDNNNGKENEIEEVVKQLQAITSQNAESAQETLGTKEAPQQENKEEIKKEAQ QETKENKTPTTQNPTSDNPLADEPDLDYANMSAEEVEAEIERLLNKRQEADKERRAQKKQANPKQEVTPAKEPQKTETPK APKTETKAKVKTDREENKAPSIGVEQTVRVDVRRLDHLMNLIGELVLGKNRLIRIYSDVEERYDGEKFLEELNQVVSSIS AVTTDLQLAVMKTRMQPVGKVFNKFPRMVRDLSRELGKSIELIIEGEETELDKSIVEEIGDPLIHIIRNSCDHGIEPLEE RKRLNKPETGKVQLSAYNEGNHIVIKISDDGKGLDPAMLKEKAVEKGVISERDAESMSDREAFNLIFKPGFSTAKAVSNV SGRGVGMDVVKTNIEKLNGIIEIDSEVGVGTTQKLKIPLTLAIIQALLVGVQEEYYAIPLSSVLETVRIIQDEIYTVDGK SVLRLRNEVLSLVRLSDIFKVDAIFESSADVYVVIIGLADQKIGVIVDYLIGQEEVVIKSLGYYLKNTKGIAGATVRGDG KITLIVDVGAMMDMAKSIKVNITNLMNESENTKNKNSPSDYVVLAIDDSSTDRAIIRKCLKPLGITLLEATNGLEGLEML KSGDKIPDAILVDIEMPKMDGYTFASEVRKYNKFKNLPLIAVTSRVTKTDRMRGVESGMTEYITKPYSGEYLASVVKRSI KLEGGQS
Sequences:
>Translated_807_residues MDDLQEIMEDFLIEAFEMNEQLDQDLVELEHNPEDLELLNRIFRVAHTIKGSSSFLNLNILTHLTHNMEDVLNRARKGEI KITPDIMDVVLRSIDLMKTLLVTIRDTGSDNNNGKENEIEEVVKQLQAITSQNAESAQETLGTKEAPQQENKEEIKKEAQ QETKENKTPTTQNPTSDNPLADEPDLDYANMSAEEVEAEIERLLNKRQEADKERRAQKKQANPKQEVTPAKEPQKTETPK APKTETKAKVKTDREENKAPSIGVEQTVRVDVRRLDHLMNLIGELVLGKNRLIRIYSDVEERYDGEKFLEELNQVVSSIS AVTTDLQLAVMKTRMQPVGKVFNKFPRMVRDLSRELGKSIELIIEGEETELDKSIVEEIGDPLIHIIRNSCDHGIEPLEE RKRLNKPETGKVQLSAYNEGNHIVIKISDDGKGLDPAMLKEKAVEKGVISERDAESMSDREAFNLIFKPGFSTAKAVSNV SGRGVGMDVVKTNIEKLNGIIEIDSEVGVGTTQKLKIPLTLAIIQALLVGVQEEYYAIPLSSVLETVRIIQDEIYTVDGK SVLRLRNEVLSLVRLSDIFKVDAIFESSADVYVVIIGLADQKIGVIVDYLIGQEEVVIKSLGYYLKNTKGIAGATVRGDG KITLIVDVGAMMDMAKSIKVNITNLMNESENTKNKNSPSDYVVLAIDDSSTDRAIIRKCLKPLGITLLEATNGLEGLEML KSGDKIPDAILVDIEMPKMDGYTFASEVRKYNKFKNLPLIAVTSRVTKTDRMRGVESGMTEYITKPYSGEYLASVVKRSI KLEGGQS >Mature_807_residues MDDLQEIMEDFLIEAFEMNEQLDQDLVELEHNPEDLELLNRIFRVAHTIKGSSSFLNLNILTHLTHNMEDVLNRARKGEI KITPDIMDVVLRSIDLMKTLLVTIRDTGSDNNNGKENEIEEVVKQLQAITSQNAESAQETLGTKEAPQQENKEEIKKEAQ QETKENKTPTTQNPTSDNPLADEPDLDYANMSAEEVEAEIERLLNKRQEADKERRAQKKQANPKQEVTPAKEPQKTETPK APKTETKAKVKTDREENKAPSIGVEQTVRVDVRRLDHLMNLIGELVLGKNRLIRIYSDVEERYDGEKFLEELNQVVSSIS AVTTDLQLAVMKTRMQPVGKVFNKFPRMVRDLSRELGKSIELIIEGEETELDKSIVEEIGDPLIHIIRNSCDHGIEPLEE RKRLNKPETGKVQLSAYNEGNHIVIKISDDGKGLDPAMLKEKAVEKGVISERDAESMSDREAFNLIFKPGFSTAKAVSNV SGRGVGMDVVKTNIEKLNGIIEIDSEVGVGTTQKLKIPLTLAIIQALLVGVQEEYYAIPLSSVLETVRIIQDEIYTVDGK SVLRLRNEVLSLVRLSDIFKVDAIFESSADVYVVIIGLADQKIGVIVDYLIGQEEVVIKSLGYYLKNTKGIAGATVRGDG KITLIVDVGAMMDMAKSIKVNITNLMNESENTKNKNSPSDYVVLAIDDSSTDRAIIRKCLKPLGITLLEATNGLEGLEML KSGDKIPDAILVDIEMPKMDGYTFASEVRKYNKFKNLPLIAVTSRVTKTDRMRGVESGMTEYITKPYSGEYLASVVKRSI KLEGGQS
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Membrane (Potential). Note=It is not known whether CheA is actually membrane bound although CheA has two regions at the C-terminal end with the potential to be transmembrane regions [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=658, Percent_Identity=34.9544072948328, Blast_Score=343, Evalue=2e-95, Organism=Escherichia coli, GI1790299, Length=119, Percent_Identity=31.0924369747899, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI145693157, Length=123, Percent_Identity=31.7073170731707, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR010808 [H]
Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt; PF07194 P2 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 90151; Mature: 90151
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLQEIMEDFLIEAFEMNEQLDQDLVELEHNPEDLELLNRIFRVAHTIKGSSSFLNLNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHH LTHLTHNMEDVLNRARKGEIKITPDIMDVVLRSIDLMKTLLVTIRDTGSDNNNGKENEIE HHHHHCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH EVVKQLQAITSQNAESAQETLGTKEAPQQENKEEIKKEAQQETKENKTPTTQNPTSDNPL HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ADEPDLDYANMSAEEVEAEIERLLNKRQEADKERRAQKKQANPKQEVTPAKEPQKTETPK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC APKTETKAKVKTDREENKAPSIGVEQTVRVDVRRLDHLMNLIGELVLGKNRLIRIYSDVE CCCCCCHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH ERYDGEKFLEELNQVVSSISAVTTDLQLAVMKTRMQPVGKVFNKFPRMVRDLSRELGKSI HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE ELIIEGEETELDKSIVEEIGDPLIHIIRNSCDHGIEPLEERKRLNKPETGKVQLSAYNEG EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEECCC NHIVIKISDDGKGLDPAMLKEKAVEKGVISERDAESMSDREAFNLIFKPGFSTAKAVSNV CEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHCC SGRGVGMDVVKTNIEKLNGIIEIDSEVGVGTTQKLKIPLTLAIIQALLVGVQEEYYAIPL CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCH SSVLETVRIIQDEIYTVDGKSVLRLRNEVLSLVRLSDIFKVDAIFESSADVYVVIIGLAD HHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC QKIGVIVDYLIGQEEVVIKSLGYYLKNTKGIAGATVRGDGKITLIVDVGAMMDMAKSIKV CCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECHHHHHHHHHHHH NITNLMNESENTKNKNSPSDYVVLAIDDSSTDRAIIRKCLKPLGITLLEATNGLEGLEML HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEHHCCCHHHHHHH KSGDKIPDAILVDIEMPKMDGYTFASEVRKYNKFKNLPLIAVTSRVTKTDRMRGVESGMT HCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH EYITKPYSGEYLASVVKRSIKLEGGQS HHHCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDDLQEIMEDFLIEAFEMNEQLDQDLVELEHNPEDLELLNRIFRVAHTIKGSSSFLNLNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHH LTHLTHNMEDVLNRARKGEIKITPDIMDVVLRSIDLMKTLLVTIRDTGSDNNNGKENEIE HHHHHCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH EVVKQLQAITSQNAESAQETLGTKEAPQQENKEEIKKEAQQETKENKTPTTQNPTSDNPL HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ADEPDLDYANMSAEEVEAEIERLLNKRQEADKERRAQKKQANPKQEVTPAKEPQKTETPK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC APKTETKAKVKTDREENKAPSIGVEQTVRVDVRRLDHLMNLIGELVLGKNRLIRIYSDVE CCCCCCHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH ERYDGEKFLEELNQVVSSISAVTTDLQLAVMKTRMQPVGKVFNKFPRMVRDLSRELGKSI HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE ELIIEGEETELDKSIVEEIGDPLIHIIRNSCDHGIEPLEERKRLNKPETGKVQLSAYNEG EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEECCC NHIVIKISDDGKGLDPAMLKEKAVEKGVISERDAESMSDREAFNLIFKPGFSTAKAVSNV CEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHCC SGRGVGMDVVKTNIEKLNGIIEIDSEVGVGTTQKLKIPLTLAIIQALLVGVQEEYYAIPL CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCH SSVLETVRIIQDEIYTVDGKSVLRLRNEVLSLVRLSDIFKVDAIFESSADVYVVIIGLAD HHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC QKIGVIVDYLIGQEEVVIKSLGYYLKNTKGIAGATVRGDGKITLIVDVGAMMDMAKSIKV CCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECHHHHHHHHHHHH NITNLMNESENTKNKNSPSDYVVLAIDDSSTDRAIIRKCLKPLGITLLEATNGLEGLEML HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEHHCCCHHHHHHH KSGDKIPDAILVDIEMPKMDGYTFASEVRKYNKFKNLPLIAVTSRVTKTDRMRGVESGMT HCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH EYITKPYSGEYLASVVKRSIKLEGGQS HHHCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1938941; 9384377 [H]