| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is pgl [H]
Identifier: 109947042
GI number: 109947042
Start: 383627
End: 384310
Strand: Reverse
Name: pgl [H]
Synonym: Hac_0440
Alternate gene names: 109947042
Gene position: 384310-383627 (Counterclockwise)
Preceding gene: 109947043
Following gene: 109947041
Centisome position: 24.73
GC content: 36.11
Gene sequence:
>684_bases ATGGGTTATCAATTATTTGAATTTGAAAGTTTAGAAGATTGTAATAAGGCTTTAATAGAGCATTTTAAAGAATTTTTTAA CGCTACCTTAAAAAAGCATCATCAAGTTTCTATTGCTTTTTCTGGAGGCCGTTCGCCCATTAGCTTGTTGCAAAAATTGA GCGTTTTAGATCTCAAGTGGCATGAATGTGTAGTCAGTTTAGTAGATGAACGCATTATAGATACAAGCCATAAGGATAGT AATACCAAGTTATTACACGATTATTTGTTGCAAAATAACGCCCTAAAAGCTTCTTTCATTCCGCTTTTACCCAAAGAGAT TTCTTGCAATCAAAACGCGCTTTTAAATTTTGCTAACCAGCACTTCAAACAGCCACATTTAGCCATTCTAGGCATGGGGA CAGATGGGCATACGGCTAGCCTTTTTCCTGAAACGAGCACTTTTTTAAACGAAGAAAAAGAAAATATCGTCTTAACTAAG CCAGCTAACGCTCCTTATGAACGCCTGAGCATGTCTATTAACGCCTTAGAAAATTGCGAAAAACTTTTTTTAAGCATTAG TGGAGCGGAAAAAAGGGGAGTTTTAGAAAAGGCTTTAAAAGAAAACGCCCCTTATTCTCTACCAATTGCTCGGATTTTAC ACTCTAAAAAAGTTACCACGGAGGTTTTTTATGCCAAAAACTGA
Upstream 100 bases:
>100_bases GAGGGTTTTATCAATAACGCCACGCCCTTACATTTCTATGAAAGCCACAACCTAAACGAGTTAGAATTTTTAAAACCACT CTATCAATAAAAGGAATTTC
Downstream 100 bases:
>100_bases AACTTACCCAAGACTATTAGCCGATATTGGCGGCACAAATGCACGCTTTGGTTTGGAAGTCGCCTCACGACAAATTGAAT GCATTGAAGTCTTGCGATGC
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGYQLFEFESLEDCNKALIEHFKEFFNATLKKHHQVSIAFSGGRSPISLLQKLSVLDLKWHECVVSLVDERIIDTSHKDS NTKLLHDYLLQNNALKASFIPLLPKEISCNQNALLNFANQHFKQPHLAILGMGTDGHTASLFPETSTFLNEEKENIVLTK PANAPYERLSMSINALENCEKLFLSISGAEKRGVLEKALKENAPYSLPIARILHSKKVTTEVFYAKN
Sequences:
>Translated_227_residues MGYQLFEFESLEDCNKALIEHFKEFFNATLKKHHQVSIAFSGGRSPISLLQKLSVLDLKWHECVVSLVDERIIDTSHKDS NTKLLHDYLLQNNALKASFIPLLPKEISCNQNALLNFANQHFKQPHLAILGMGTDGHTASLFPETSTFLNEEKENIVLTK PANAPYERLSMSINALENCEKLFLSISGAEKRGVLEKALKENAPYSLPIARILHSKKVTTEVFYAKN >Mature_226_residues GYQLFEFESLEDCNKALIEHFKEFFNATLKKHHQVSIAFSGGRSPISLLQKLSVLDLKWHECVVSLVDERIIDTSHKDSN TKLLHDYLLQNNALKASFIPLLPKEISCNQNALLNFANQHFKQPHLAILGMGTDGHTASLFPETSTFLNEEKENIVLTKP ANAPYERLSMSINALENCEKLFLSISGAEKRGVLEKALKENAPYSLPIARILHSKKVTTEVFYAKN
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=206, Percent_Identity=31.5533980582524, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25626; Mature: 25495
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYQLFEFESLEDCNKALIEHFKEFFNATLKKHHQVSIAFSGGRSPISLLQKLSVLDLKW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCHH HECVVSLVDERIIDTSHKDSNTKLLHDYLLQNNALKASFIPLLPKEISCNQNALLNFANQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHH HFKQPHLAILGMGTDGHTASLFPETSTFLNEEKENIVLTKPANAPYERLSMSINALENCE HCCCCCEEEEEECCCCCCEECCCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH KLFLSISGAEKRGVLEKALKENAPYSLPIARILHSKKVTTEVFYAKN HHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure GYQLFEFESLEDCNKALIEHFKEFFNATLKKHHQVSIAFSGGRSPISLLQKLSVLDLKW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCHH HECVVSLVDERIIDTSHKDSNTKLLHDYLLQNNALKASFIPLLPKEISCNQNALLNFANQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHH HFKQPHLAILGMGTDGHTASLFPETSTFLNEEKENIVLTKPANAPYERLSMSINALENCE HCCCCCEEEEEECCCCCCEECCCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH KLFLSISGAEKRGVLEKALKENAPYSLPIARILHSKKVTTEVFYAKN HHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]