| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is porB [H]
Identifier: 109947033
GI number: 109947033
Start: 374436
End: 375380
Strand: Reverse
Name: porB [H]
Synonym: Hac_0430
Alternate gene names: 109947033
Gene position: 375380-374436 (Counterclockwise)
Preceding gene: 109947034
Following gene: 109947032
Centisome position: 24.16
GC content: 41.27
Gene sequence:
>945_bases ATGGTAAAAGAAGTCAAAACACTCAAAGGTTTTAGCCAAAGTGCTGAAAAATTCCAAGGCTCGCACTTGCTTTGTCCAGG TTGTGGGCATGGCATTATCGTGCGTGAAGTTCTAAACGCCGTAGATGGGCCTATTGTTTTAGGTAATTCTACCGGTTGTT TAGAAGTATGCTCGGCTGTGTATCCGCACACTTCATGGGATGTGCCTTGGATTCATATTGGTTTTGAAAATGGCTCTACG GCTATTTCAGGGGTAGAGGCTATGTATAAGGCACTAGTGAATAAGGGTCGTTATAATGGTCAAAAGCCCAAATTCGTGGC GTTTGGAGGCGATGGGGCTAGTTATGATATTGGTTTTCAATTTATCAGCGGTTGCATGGAGAGAGGGCATGACATGACTT ATATTTGCTTAGATAATGAAAACTACGCCAATACCGGTGGTCAAAGAAGCGGTTCTACGCCATTAGGGGCAAGCACTTCC ACCACGCCAGCGGGATCAGTTAGCTTTGGCAAAAAAGAAAAGAAAAAAGACATTGTCAATATCATGGCAAGCCACGGAAT TCCTTATGTGGCACAACTCTCTCCTAACAAATGGAAAGACATGAACAAAAAGATTAAAACTGCACTAGACACTGAAGGGC CTTGCTTTATTAACGCTCTTAGCCCATGCACAACTGAATGGAAATTTGAATCCAATAAAACCATTGAATTAGCGGATATG GCTGTGGATAGCTTGATGTTCCCCTTATTTGAAATTTTTAATGGCAGAGAATTAAAAATCACTTACCGCCCAAGAAATAT CATTCCTGTAAGGGATTATTTAGGGGCACAAAAACGCTTCAAACACCTTTTCAAAAAGGAAAACGAGCATGTCATTGAAG AATTGCAAAAAGATGTGAATGAGCGTTGGGAATACTTGCAACGCAGAGAAGAAGCTAAAGTATAA
Upstream 100 bases:
>100_bases AATCAATGAAGACGCTCTTAAAAGCACGCTCACGCACCCTACCCAACAATTCGTAGGCTTGCGCGGTCCTAAAATAAGCT TTTTTTAAAAAGGAAATATC
Downstream 100 bases:
>100_bases CTCTTCAATCAAATCAAGGGGCTTTTTGGGTGCATCTTTTATCCCCTTGATTTTACCCCTTTCGAATAAATTCTAGATTT TAAGGATTGTTGGTGTTAGA
Product: pyruvate ferredoxin oxidoreductase, beta subunit
Products: NA
Alternate protein names: Pyruvate oxidoreductase beta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MVKEVKTLKGFSQSAEKFQGSHLLCPGCGHGIIVREVLNAVDGPIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGFENGST AISGVEAMYKALVNKGRYNGQKPKFVAFGGDGASYDIGFQFISGCMERGHDMTYICLDNENYANTGGQRSGSTPLGASTS TTPAGSVSFGKKEKKKDIVNIMASHGIPYVAQLSPNKWKDMNKKIKTALDTEGPCFINALSPCTTEWKFESNKTIELADM AVDSLMFPLFEIFNGRELKITYRPRNIIPVRDYLGAQKRFKHLFKKENEHVIEELQKDVNERWEYLQRREEAKV
Sequences:
>Translated_314_residues MVKEVKTLKGFSQSAEKFQGSHLLCPGCGHGIIVREVLNAVDGPIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGFENGST AISGVEAMYKALVNKGRYNGQKPKFVAFGGDGASYDIGFQFISGCMERGHDMTYICLDNENYANTGGQRSGSTPLGASTS TTPAGSVSFGKKEKKKDIVNIMASHGIPYVAQLSPNKWKDMNKKIKTALDTEGPCFINALSPCTTEWKFESNKTIELADM AVDSLMFPLFEIFNGRELKITYRPRNIIPVRDYLGAQKRFKHLFKKENEHVIEELQKDVNERWEYLQRREEAKV >Mature_314_residues MVKEVKTLKGFSQSAEKFQGSHLLCPGCGHGIIVREVLNAVDGPIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGFENGST AISGVEAMYKALVNKGRYNGQKPKFVAFGGDGASYDIGFQFISGCMERGHDMTYICLDNENYANTGGQRSGSTPLGASTS TTPAGSVSFGKKEKKKDIVNIMASHGIPYVAQLSPNKWKDMNKKIKTALDTEGPCFINALSPCTTEWKFESNKTIELADM AVDSLMFPLFEIFNGRELKITYRPRNIIPVRDYLGAQKRFKHLFKKENEHVIEELQKDVNERWEYLQRREEAKV
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=215, Percent_Identity=30.6976744186047, Blast_Score=81, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 34974; Mature: 34974
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKEVKTLKGFSQSAEKFQGSHLLCPGCGHGIIVREVLNAVDGPIVLGNSTGCLEVCSAV CCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHH YPHTSWDVPWIHIGFENGSTAISGVEAMYKALVNKGRYNGQKPKFVAFGGDGASYDIGFQ CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHH FISGCMERGHDMTYICLDNENYANTGGQRSGSTPLGASTSTTPAGSVSFGKKEKKKDIVN HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IMASHGIPYVAQLSPNKWKDMNKKIKTALDTEGPCFINALSPCTTEWKFESNKTIELADM HHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCEEEHHHH AVDSLMFPLFEIFNGRELKITYRPRNIIPVRDYLGAQKRFKHLFKKENEHVIEELQKDVN HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHH ERWEYLQRREEAKV HHHHHHHHHHHCCC >Mature Secondary Structure MVKEVKTLKGFSQSAEKFQGSHLLCPGCGHGIIVREVLNAVDGPIVLGNSTGCLEVCSAV CCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHH YPHTSWDVPWIHIGFENGSTAISGVEAMYKALVNKGRYNGQKPKFVAFGGDGASYDIGFQ CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHH FISGCMERGHDMTYICLDNENYANTGGQRSGSTPLGASTSTTPAGSVSFGKKEKKKDIVN HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IMASHGIPYVAQLSPNKWKDMNKKIKTALDTEGPCFINALSPCTTEWKFESNKTIELADM HHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCEEEHHHH AVDSLMFPLFEIFNGRELKITYRPRNIIPVRDYLGAQKRFKHLFKKENEHVIEELQKDVN HHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHH ERWEYLQRREEAKV HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]