| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946980
Identifier: 109946980
GI number: 109946980
Start: 317639
End: 319765
Strand: Direct
Name: 109946980
Synonym: Hac_0372
Alternate gene names: NA
Gene position: 317639-319765 (Clockwise)
Preceding gene: 109946979
Following gene: 109946981
Centisome position: 20.44
GC content: 42.36
Gene sequence:
>2127_bases TTGATTTTTATTCAAATAGAAATTTTGAAAAGTTTGATAGGAGCAATGGCGTTTATAGTCCTGAACTACCTAACGCCACA GATAAGGGAAGCAGACCACAGCCTACAACCCTTAAACCTAATCCTACACAAAAAACCCTTAACCAGTCAAGAGTCTTTAT TAAAAAAACCAGAAAACCCTAACGAATTGACACCAGAAACTCCAAATTTATCCCCCCACAAACAAGCTAACGCCGAAAAG CTTGCGAAGTTAGAACGAGAAGCACAAGAAAGCGAACAGGAATTTTTAAAAGCCAAAGAACAAGAAGCTAAAAGGAAAGA AGCCTTAAAACGCAAATTAGAACACGAGCGCGGCAACGCCGGTAACCTTGAAAGCCAGACTAAGATAGAAGTGGGAGAGG ATATCCCCACACAGATTTTAGCGAGCATCCCTAAGAGTCGGGTGCGCTTGAACGAAAGAGAGATTTACGACTTAGACTAC GCGATCGTGAATGCAAAAGATCTAAAGCCCAGTTTCACTACAGGAGGCACGCAAAAGCGCACCGCCATGAACGAAGAACA GATCCAAAGCATCGCGCGGAATTTTGACCCTAAAAAGATATTCGGGAGCGGAGGGTTTGAAGACTTGCCCATCATCTTGC ATGACGGGCAGGTGATCGCGCCCAACCACTGGGTAGAAGGCATGCTCAACTTCACGCCTAAAAGCCGATACGCTTACGAT AAAGCGATCAAAGAATACTACCGCGTCCACCTGAAGCCGGATGAATTGTTAGTGAGAATCCCCCACAAACGCTTGAACCA CACCGAGATCAACCATTTAGCGGCCGCGTCCAATCAAGGGCACTTTAACAGCGAAAGCGATCACGCGTTAGCGGTTTTGA GCCATTACGAAGCGAAATTAAAAGAATTAGAAAAGAAATTAGACGCTGATAGCATCTACTCATTAAAAAACATCGTAGCT AAAAACCTGAATTTTGATAAGGCCTCCCACCCTATCGTAACCGACAGCAATTTAGCGTTGCTGATGTTCAACATGCCAAG GACCAAAACCCAAGGCATAGAATTACTGAACCGATGGCAGAAAGAATTTTCTAACGACATTAAAAGCTATGAAAAGGTGA AAAAAATGTTTGCAGACAACGCTGGGAGTTTCCATAACCTCATTCATGACATGAACCTCCCTAAAGTGAGCCTGAACGCT TATTTGAGCGGCATCATGGATCGCGCTTTCGCGAACATGAAGAAATACCCGACCACGAGCGAGGGCTTGAAGGATTTGAG CGAGAGATTCTACCAAACAAGCTCCTTAGGGGTGTTTGAAAAATCCGATCAAGCCGTCAGCGATATCAGCGAGATCTTAG GCGCTGGGTTTGCCCGGTTTGCACGCTTGGATGATCCGAGCAAGGCGTTGTTTGAAGCCTTAAAGAGCGATAACATCAAG AAAGGCTTGAAAGAATTCAAGATCGCTGATGAGGCTAAGGACATGTTTGATCCCAACAGCAAGGAATTCAAGGACATTGA CATTTACGACTTCACGCGTTACCTTTTGATGGTCAATAGGGAGCCGAATGAAAATAATCCCGTATTGAATCGTTTGATCC AAGCCGTTAAGGACATGCAAAAAGAAAGCGAGAAAGGGATAAAAAAACAAAAACTTGAAACGCCTAGCGAGTGGGGACAC AATTATAGTGAGTTTAAGGGTGATGGCTTAGGCACGATCAACAAGCTATTAGAAACTAAAAAAGGTTTTGTAGCAGGAGC GTTTTATAAGGAAGGTTTAGGCGATATTGATTTAGTTTGGGGAAATTCTAAATACGGACTACAACATATATTCACTCGTA GGGAAAGCGATGCGATAGACAAAGGCATGAGCAAAGAAGAAGCTAAAAAATACGCATTAGAAATCATTAACAATATCCCT AATATCATAAGCAATGGAAAACTATCAAAAGATGATTTAGGGCGTTTAAGTATTGAATTCACAAATCAAAGAGTCGGTTT GAATGATAGTTGGAAAGGTGAAACTTTAAATAATAGATGGGTTATTACAAGCTATGAAGTGAATCAATCAAGGAACGGAC TAATTGAGTCGCCTTTAGCACCAAATTACAAGGGGAAAAGATACTAA
Upstream 100 bases:
>100_bases GAAAAGCTTGCAGATGGGTTTAGGTATGGCTACGAATGGGACAATAACGGCGTGAAGCTCGGGTTAGTGGTAGACGATTT AAACGATGGGAATAAGATTT
Downstream 100 bases:
>100_bases TCCCCTAAACCTTGATATACCTAATCCTACCACAAAAAAGTGAATAAGGAATAAAATGAATTATCCTAATCTACCTAACA GCGCTTTAGAAATCACAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 708; Mature: 708
Protein sequence:
>708_residues MIFIQIEILKSLIGAMAFIVLNYLTPQIREADHSLQPLNLILHKKPLTSQESLLKKPENPNELTPETPNLSPHKQANAEK LAKLEREAQESEQEFLKAKEQEAKRKEALKRKLEHERGNAGNLESQTKIEVGEDIPTQILASIPKSRVRLNEREIYDLDY AIVNAKDLKPSFTTGGTQKRTAMNEEQIQSIARNFDPKKIFGSGGFEDLPIILHDGQVIAPNHWVEGMLNFTPKSRYAYD KAIKEYYRVHLKPDELLVRIPHKRLNHTEINHLAAASNQGHFNSESDHALAVLSHYEAKLKELEKKLDADSIYSLKNIVA KNLNFDKASHPIVTDSNLALLMFNMPRTKTQGIELLNRWQKEFSNDIKSYEKVKKMFADNAGSFHNLIHDMNLPKVSLNA YLSGIMDRAFANMKKYPTTSEGLKDLSERFYQTSSLGVFEKSDQAVSDISEILGAGFARFARLDDPSKALFEALKSDNIK KGLKEFKIADEAKDMFDPNSKEFKDIDIYDFTRYLLMVNREPNENNPVLNRLIQAVKDMQKESEKGIKKQKLETPSEWGH NYSEFKGDGLGTINKLLETKKGFVAGAFYKEGLGDIDLVWGNSKYGLQHIFTRRESDAIDKGMSKEEAKKYALEIINNIP NIISNGKLSKDDLGRLSIEFTNQRVGLNDSWKGETLNNRWVITSYEVNQSRNGLIESPLAPNYKGKRY
Sequences:
>Translated_708_residues MIFIQIEILKSLIGAMAFIVLNYLTPQIREADHSLQPLNLILHKKPLTSQESLLKKPENPNELTPETPNLSPHKQANAEK LAKLEREAQESEQEFLKAKEQEAKRKEALKRKLEHERGNAGNLESQTKIEVGEDIPTQILASIPKSRVRLNEREIYDLDY AIVNAKDLKPSFTTGGTQKRTAMNEEQIQSIARNFDPKKIFGSGGFEDLPIILHDGQVIAPNHWVEGMLNFTPKSRYAYD KAIKEYYRVHLKPDELLVRIPHKRLNHTEINHLAAASNQGHFNSESDHALAVLSHYEAKLKELEKKLDADSIYSLKNIVA KNLNFDKASHPIVTDSNLALLMFNMPRTKTQGIELLNRWQKEFSNDIKSYEKVKKMFADNAGSFHNLIHDMNLPKVSLNA YLSGIMDRAFANMKKYPTTSEGLKDLSERFYQTSSLGVFEKSDQAVSDISEILGAGFARFARLDDPSKALFEALKSDNIK KGLKEFKIADEAKDMFDPNSKEFKDIDIYDFTRYLLMVNREPNENNPVLNRLIQAVKDMQKESEKGIKKQKLETPSEWGH NYSEFKGDGLGTINKLLETKKGFVAGAFYKEGLGDIDLVWGNSKYGLQHIFTRRESDAIDKGMSKEEAKKYALEIINNIP NIISNGKLSKDDLGRLSIEFTNQRVGLNDSWKGETLNNRWVITSYEVNQSRNGLIESPLAPNYKGKRY >Mature_708_residues MIFIQIEILKSLIGAMAFIVLNYLTPQIREADHSLQPLNLILHKKPLTSQESLLKKPENPNELTPETPNLSPHKQANAEK LAKLEREAQESEQEFLKAKEQEAKRKEALKRKLEHERGNAGNLESQTKIEVGEDIPTQILASIPKSRVRLNEREIYDLDY AIVNAKDLKPSFTTGGTQKRTAMNEEQIQSIARNFDPKKIFGSGGFEDLPIILHDGQVIAPNHWVEGMLNFTPKSRYAYD KAIKEYYRVHLKPDELLVRIPHKRLNHTEINHLAAASNQGHFNSESDHALAVLSHYEAKLKELEKKLDADSIYSLKNIVA KNLNFDKASHPIVTDSNLALLMFNMPRTKTQGIELLNRWQKEFSNDIKSYEKVKKMFADNAGSFHNLIHDMNLPKVSLNA YLSGIMDRAFANMKKYPTTSEGLKDLSERFYQTSSLGVFEKSDQAVSDISEILGAGFARFARLDDPSKALFEALKSDNIK KGLKEFKIADEAKDMFDPNSKEFKDIDIYDFTRYLLMVNREPNENNPVLNRLIQAVKDMQKESEKGIKKQKLETPSEWGH NYSEFKGDGLGTINKLLETKKGFVAGAFYKEGLGDIDLVWGNSKYGLQHIFTRRESDAIDKGMSKEEAKKYALEIINNIP NIISNGKLSKDDLGRLSIEFTNQRVGLNDSWKGETLNNRWVITSYEVNQSRNGLIESPLAPNYKGKRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80647; Mature: 80647
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFIQIEILKSLIGAMAFIVLNYLTPQIREADHSLQPLNLILHKKPLTSQESLLKKPENP CEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHEEECCCCCCHHHHHCCCCCC NELTPETPNLSPHKQANAEKLAKLEREAQESEQEFLKAKEQEAKRKEALKRKLEHERGNA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GNLESQTKIEVGEDIPTQILASIPKSRVRLNEREIYDLDYAIVNAKDLKPSFTTGGTQKR CCCCCCCEEECCCCCHHHHHHHCCHHHHCCCCCCEEECCEEEEEHHHCCCCCCCCCCHHH TAMNEEQIQSIARNFDPKKIFGSGGFEDLPIILHDGQVIAPNHWVEGMLNFTPKSRYAYD HHCCHHHHHHHHHCCCCHHEECCCCCCCCCEEEECCEEECCCHHHHHHHCCCCCHHHHHH KAIKEYYRVHLKPDELLVRIPHKRLNHTEINHLAAASNQGHFNSESDHALAVLSHYEAKL HHHHHHHHCCCCHHHHHEECCHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH KELEKKLDADSIYSLKNIVAKNLNFDKASHPIVTDSNLALLMFNMPRTKTQGIELLNRWQ HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHH KEFSNDIKSYEKVKKMFADNAGSFHNLIHDMNLPKVSLNAYLSGIMDRAFANMKKYPTTS HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH EGLKDLSERFYQTSSLGVFEKSDQAVSDISEILGAGFARFARLDDPSKALFEALKSDNIK HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH KGLKEFKIADEAKDMFDPNSKEFKDIDIYDFTRYLLMVNREPNENNPVLNRLIQAVKDMQ HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHH KESEKGIKKQKLETPSEWGHNYSEFKGDGLGTINKLLETKKGFVAGAFYKEGLGDIDLVW HHHHHCHHHHHCCCCHHHCCCHHHHCCCCHHHHHHHHHHHCCCEEEHHHHCCCCCEEEEE GNSKYGLQHIFTRRESDAIDKGMSKEEAKKYALEIINNIPNIISNGKLSKDDLGRLSIEF CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE TNQRVGLNDSWKGETLNNRWVITSYEVNQSRNGLIESPLAPNYKGKRY ECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIFIQIEILKSLIGAMAFIVLNYLTPQIREADHSLQPLNLILHKKPLTSQESLLKKPENP CEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHEEECCCCCCHHHHHCCCCCC NELTPETPNLSPHKQANAEKLAKLEREAQESEQEFLKAKEQEAKRKEALKRKLEHERGNA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GNLESQTKIEVGEDIPTQILASIPKSRVRLNEREIYDLDYAIVNAKDLKPSFTTGGTQKR CCCCCCCEEECCCCCHHHHHHHCCHHHHCCCCCCEEECCEEEEEHHHCCCCCCCCCCHHH TAMNEEQIQSIARNFDPKKIFGSGGFEDLPIILHDGQVIAPNHWVEGMLNFTPKSRYAYD HHCCHHHHHHHHHCCCCHHEECCCCCCCCCEEEECCEEECCCHHHHHHHCCCCCHHHHHH KAIKEYYRVHLKPDELLVRIPHKRLNHTEINHLAAASNQGHFNSESDHALAVLSHYEAKL HHHHHHHHCCCCHHHHHEECCHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH KELEKKLDADSIYSLKNIVAKNLNFDKASHPIVTDSNLALLMFNMPRTKTQGIELLNRWQ HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHH KEFSNDIKSYEKVKKMFADNAGSFHNLIHDMNLPKVSLNAYLSGIMDRAFANMKKYPTTS HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH EGLKDLSERFYQTSSLGVFEKSDQAVSDISEILGAGFARFARLDDPSKALFEALKSDNIK HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH KGLKEFKIADEAKDMFDPNSKEFKDIDIYDFTRYLLMVNREPNENNPVLNRLIQAVKDMQ HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHH KESEKGIKKQKLETPSEWGHNYSEFKGDGLGTINKLLETKKGFVAGAFYKEGLGDIDLVW HHHHHCHHHHHCCCCHHHCCCHHHHCCCCHHHHHHHHHHHCCCEEEHHHHCCCCCEEEEE GNSKYGLQHIFTRRESDAIDKGMSKEEAKKYALEIINNIPNIISNGKLSKDDLGRLSIEF CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE TNQRVGLNDSWKGETLNNRWVITSYEVNQSRNGLIESPLAPNYKGKRY ECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA