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The map label for this gene is rfaJ

Identifier: 109946952

GI number: 109946952

Start: 289295

End: 290398

Strand: Reverse

Name: rfaJ

Synonym: Hac_0342

Alternate gene names: NA

Gene position: 290398-289295 (Counterclockwise)

Preceding gene: 109946954

Following gene: 109946945

Centisome position: 18.69

GC content: 35.24

Gene sequence:

>1104_bases
ATGAATGCCACTATCCCTATTGTTATCGCTTTTGACAATAATTACGCTATCCCAGCTGGCGTGAGCTTATATTCCATGCT
AGCGAACGCTAAAACAGAGAATTATAATAAAAAGTTATTTTATAAAATCTATTGCTTGGTGGATCATTTAAGTGCAGAAA
ACCAACACAAATTAAAAGAGACTCTAGCCCCCTTTAGCGCTTTTTCTAGCGTGGATTTTATGGATATTTCAGAGCCCAGC
CATTCCACTATCACAATAGAACCTTTTGTGATTGATAAAATCAATGAAGCCTTTTTGCAGCTCAACGATTATGCCAAAAC
GCGCTTTTCTAAAATGGTCATGTGCCGCTTGTTTTTGGCTTCTTTATTCCCAGAATACGACAAGATTATCATGTTTGATG
CGGACACTTTGTTTTTAAATGATATTAGCGAGAGCTTTTTTATCCCCATAGATAATGATTATTTGGGAGTGGCTAAAGAT
TTTGCCTCTTCTAAAAGCCCTAAACATTTCCAAATTGAAAGAGAAAGGGAGCCTCGCCAAAAATTTTTTCTCTATGAGCA
TTACCTTAATGAAAGCGACATGCAAATCATTTATGAAAGCAACTATAACGCCGGATTTTTAATCGCAAATCTAAAATTAT
GGCGTGCTGATCATTTAGAAGATCAACTATTCAATCTAGCCCATCAAAAAGGTCAAAGCGTGTTTTACCCTGAACAGGAT
CTTTTGACGCTTGCATGCTATCAAAAGGTTTTAATTTTGCCTTATCTTTATAACACCCACCCTTTCATGGTCAATCAAAA
ACGCTTTATCCCCAACAAAAAAGAAATTATCATGCTGCATTTTTATTTTACAGGAAAACCTTGGGTTTTACCCTCTGCCT
TATATTCCAAAGAATGGCATGAGATTCTTTTAAAAACCCCTTTTTATGCTGAATACTCCGTGAAATTCCTCAAACAAATG
ACAACTTTTTTAAGCCTTAAAGACAAGCAAAAAACCTTTGAATTTTTAGCTCCCCTACTCAATCCAAAAACCCTTTTAGA
ATATGTCTTTTTTAGATTGAATAGAATTTTCAAACGCCTGAAAGAAAAACTCTCAAGCTTTTAG

Upstream 100 bases:

>100_bases
CTCCAATCTAATAGGCTATTATAGTATAATATTAAAAAAATAGAATAAATTTAGCTTAAATCTTTATGGTTAAAATCAGT
GTTTATGGAAATAATTTGAA

Downstream 100 bases:

>100_bases
CGTTCTCGTTTAGGCAACACGCTGTAAGCGAATTTAACATAAATCGCTAAACTGATCAATAGCACTGCCACGCCAATCGC
TAAATACACCGCATAAGTGA

Product: lipopolysaccharide 1,2-glucosyltransferase

Products: NA

Alternate protein names: Lipopolysaccharide 1 2-Glucosyltransferase; Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Family Protein; Glucosyl Transferase; Lipopolysaccharide 1 2-Glycosyltransferase; Lipopolysaccharide Biosynthesis Glycosyltransferase; LPS 1 2-Glycosyltransferase; Glycosyl Transferase GT8 Family Protein; Lps Biosynthesis Protein

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MNATIPIVIAFDNNYAIPAGVSLYSMLANAKTENYNKKLFYKIYCLVDHLSAENQHKLKETLAPFSAFSSVDFMDISEPS
HSTITIEPFVIDKINEAFLQLNDYAKTRFSKMVMCRLFLASLFPEYDKIIMFDADTLFLNDISESFFIPIDNDYLGVAKD
FASSKSPKHFQIEREREPRQKFFLYEHYLNESDMQIIYESNYNAGFLIANLKLWRADHLEDQLFNLAHQKGQSVFYPEQD
LLTLACYQKVLILPYLYNTHPFMVNQKRFIPNKKEIIMLHFYFTGKPWVLPSALYSKEWHEILLKTPFYAEYSVKFLKQM
TTFLSLKDKQKTFEFLAPLLNPKTLLEYVFFRLNRIFKRLKEKLSSF

Sequences:

>Translated_367_residues
MNATIPIVIAFDNNYAIPAGVSLYSMLANAKTENYNKKLFYKIYCLVDHLSAENQHKLKETLAPFSAFSSVDFMDISEPS
HSTITIEPFVIDKINEAFLQLNDYAKTRFSKMVMCRLFLASLFPEYDKIIMFDADTLFLNDISESFFIPIDNDYLGVAKD
FASSKSPKHFQIEREREPRQKFFLYEHYLNESDMQIIYESNYNAGFLIANLKLWRADHLEDQLFNLAHQKGQSVFYPEQD
LLTLACYQKVLILPYLYNTHPFMVNQKRFIPNKKEIIMLHFYFTGKPWVLPSALYSKEWHEILLKTPFYAEYSVKFLKQM
TTFLSLKDKQKTFEFLAPLLNPKTLLEYVFFRLNRIFKRLKEKLSSF
>Mature_367_residues
MNATIPIVIAFDNNYAIPAGVSLYSMLANAKTENYNKKLFYKIYCLVDHLSAENQHKLKETLAPFSAFSSVDFMDISEPS
HSTITIEPFVIDKINEAFLQLNDYAKTRFSKMVMCRLFLASLFPEYDKIIMFDADTLFLNDISESFFIPIDNDYLGVAKD
FASSKSPKHFQIEREREPRQKFFLYEHYLNESDMQIIYESNYNAGFLIANLKLWRADHLEDQLFNLAHQKGQSVFYPEQD
LLTLACYQKVLILPYLYNTHPFMVNQKRFIPNKKEIIMLHFYFTGKPWVLPSALYSKEWHEILLKTPFYAEYSVKFLKQM
TTFLSLKDKQKTFEFLAPLLNPKTLLEYVFFRLNRIFKRLKEKLSSF

Specific function: Unknown

COG id: COG1442

COG function: function code M; Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43339; Mature: 43339

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATIPIVIAFDNNYAIPAGVSLYSMLANAKTENYNKKLFYKIYCLVDHLSAENQHKLKE
CCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHCCCCHHHHHH
TLAPFSAFSSVDFMDISEPSHSTITIEPFVIDKINEAFLQLNDYAKTRFSKMVMCRLFLA
HHHHHHHHCCCCEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFPEYDKIIMFDADTLFLNDISESFFIPIDNDYLGVAKDFASSKSPKHFQIEREREPRQ
HHCCCCCEEEEEECCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCEEECCCCCHHH
KFFLYEHYLNESDMQIIYESNYNAGFLIANLKLWRADHLEDQLFNLAHQKGQSVFYPEQD
HHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHH
LLTLACYQKVLILPYLYNTHPFMVNQKRFIPNKKEIIMLHFYFTGKPWVLPSALYSKEWH
HHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
EILLKTPFYAEYSVKFLKQMTTFLSLKDKQKTFEFLAPLLNPKTLLEYVFFRLNRIFKRL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KEKLSSF
HHHHHCC
>Mature Secondary Structure
MNATIPIVIAFDNNYAIPAGVSLYSMLANAKTENYNKKLFYKIYCLVDHLSAENQHKLKE
CCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHCCCCHHHHHH
TLAPFSAFSSVDFMDISEPSHSTITIEPFVIDKINEAFLQLNDYAKTRFSKMVMCRLFLA
HHHHHHHHCCCCEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFPEYDKIIMFDADTLFLNDISESFFIPIDNDYLGVAKDFASSKSPKHFQIEREREPRQ
HHCCCCCEEEEEECCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCEEECCCCCHHH
KFFLYEHYLNESDMQIIYESNYNAGFLIANLKLWRADHLEDQLFNLAHQKGQSVFYPEQD
HHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHH
LLTLACYQKVLILPYLYNTHPFMVNQKRFIPNKKEIIMLHFYFTGKPWVLPSALYSKEWH
HHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
EILLKTPFYAEYSVKFLKQMTTFLSLKDKQKTFEFLAPLLNPKTLLEYVFFRLNRIFKRL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KEKLSSF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA