| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is aroK
Identifier: 109946950
GI number: 109946950
Start: 287833
End: 288321
Strand: Direct
Name: aroK
Synonym: Hac_0340
Alternate gene names: 109946950
Gene position: 287833-288321 (Clockwise)
Preceding gene: 109946949
Following gene: 109946951
Centisome position: 18.52
GC content: 37.01
Gene sequence:
>489_bases ATGCAGCATTTAGTCTTAATTGGTTTTATGGGGAGCGGTAAAAGCTCTTTAGCACAAGAATTGGGGTTGGCTTTGAATTT GGAAGTGTTGGATACAGACATGATCATTAGCGAAAGGGTAGGCTTGAGCGTGAGGGGGATTTTTGAAGAGCTTGGCGAAG ATAATTTCAGGATGTTTGAAAAAAACTTGATTGATGAATTAAAGATGCTAAAAAACCCCCATGTTATCTCTACGGGTGGG GGCATTATTATGCATGATAATTTTAAGGGTTTGGGCACGACCTTTTATTTAAAAATGGATTTTGAAACGATTATCAAGCG TTTGAGTAAAAAAGAAAGGGAAAAGCGCCCCCTTTTAAATAATTTAACTCAAGCCAAAGAGCTTTTTGAAAAACGGCAAG CTCTCTATGAAAAAAACGCTTCTTTTATCATCAATGCACAAGGCGGTTTGAAAAAATCTTTAAAACAAGCGCTACAATTC ATCGCATAA
Upstream 100 bases:
>100_bases CACAAAGATTATTACCGCATCACGCTCGTTTTAGATGGGAAATACCGCTATCTTTTGGAAGAAAAAAATGGGGCTTATGA ATTAAAATTGAAATAAAAGC
Downstream 100 bases:
>100_bases ATTTTTTTAAAGGCCTTTTGATGTTGAGTAGAGACATTGTCCAGTATTCCAAGATCCGCACTGAATTATACGCCTATCTT ACTTATTTGTTTTCGCACAA
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MQHLVLIGFMGSGKSSLAQELGLALNLEVLDTDMIISERVGLSVRGIFEELGEDNFRMFEKNLIDELKMLKNPHVISTGG GIIMHDNFKGLGTTFYLKMDFETIIKRLSKKEREKRPLLNNLTQAKELFEKRQALYEKNASFIINAQGGLKKSLKQALQF IA
Sequences:
>Translated_162_residues MQHLVLIGFMGSGKSSLAQELGLALNLEVLDTDMIISERVGLSVRGIFEELGEDNFRMFEKNLIDELKMLKNPHVISTGG GIIMHDNFKGLGTTFYLKMDFETIIKRLSKKEREKRPLLNNLTQAKELFEKRQALYEKNASFIINAQGGLKKSLKQALQF IA >Mature_162_residues MQHLVLIGFMGSGKSSLAQELGLALNLEVLDTDMIISERVGLSVRGIFEELGEDNFRMFEKNLIDELKMLKNPHVISTGG GIIMHDNFKGLGTTFYLKMDFETIIKRLSKKEREKRPLLNNLTQAKELFEKRQALYEKNASFIINAQGGLKKSLKQALQF IA
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=152, Percent_Identity=35.5263157894737, Blast_Score=81, Evalue=4e-17,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_HELAH (Q17YU7)
Other databases:
- EMBL: AM260522 - RefSeq: YP_664178.1 - ProteinModelPortal: Q17YU7 - SMR: Q17YU7 - STRING: Q17YU7 - GeneID: 4176937 - GenomeReviews: AM260522_GR - KEGG: hac:Hac_0340 - NMPDR: fig|382638.8.peg.329 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: MIISERV - ProtClustDB: PRK00131 - BioCyc: HACI382638:HAC_0340-MONOMER - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 18347; Mature: 18347
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 33-33 BINDING 57-57 BINDING 80-80 BINDING 116-116 BINDING 132-132
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLVLIGFMGSGKSSLAQELGLALNLEVLDTDMIISERVGLSVRGIFEELGEDNFRMFE CCCEEEEEECCCCHHHHHHHHCCEEEEEECCHHHHHHHHCCCHHHHHHHHHCCCHHHHHH KNLIDELKMLKNPHVISTGGGIIMHDNFKGLGTTFYLKMDFETIIKRLSKKEREKRPLLN HHHHHHHHHHCCCCEEECCCCEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHHHCHHHH NLTQAKELFEKRQALYEKNASFIINAQGGLKKSLKQALQFIA HHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MQHLVLIGFMGSGKSSLAQELGLALNLEVLDTDMIISERVGLSVRGIFEELGEDNFRMFE CCCEEEEEECCCCHHHHHHHHCCEEEEEECCHHHHHHHHCCCHHHHHHHHHCCCHHHHHH KNLIDELKMLKNPHVISTGGGIIMHDNFKGLGTTFYLKMDFETIIKRLSKKEREKRPLLN HHHHHHHHHHCCCCEEECCCCEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHHHCHHHH NLTQAKELFEKRQALYEKNASFIINAQGGLKKSLKQALQFIA HHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA